Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm37002-201ENSMUST00000194560 373 ntBASIC2.21□□□□□ -2.06
Lsm1Q8VC85 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC2.21□□□□□ -2.06
Lsm1Q8VC85 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.21□□□□□ -2.06
Lsm1Q8VC85 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.21□□□□□ -2.06
Lsm1Q8VC85 Gm18341-201ENSMUST00000197538 622 ntBASIC2.21□□□□□ -2.06
Lsm1Q8VC85 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.21□□□□□ -2.06
Lsm1Q8VC85 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Lsm1Q8VC85 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC2.21□□□□□ -2.06
Lsm1Q8VC85 CT025525.2-201ENSMUST00000227743 423 ntBASIC2.21□□□□□ -2.06
Lsm1Q8VC85 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Lsm1Q8VC85 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.2□□□□□ -2.06
Lsm1Q8VC85 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Lsm1Q8VC85 AC153881.3-201ENSMUST00000218494 1561 ntBASIC2.2□□□□□ -2.06
Lsm1Q8VC85 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Lsm1Q8VC85 Gm23747-201ENSMUST00000104228 131 ntBASIC2.2□□□□□ -2.06
Lsm1Q8VC85 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC2.2□□□□□ -2.06
Lsm1Q8VC85 Gm15029-201ENSMUST00000119742 199 ntBASIC2.2□□□□□ -2.06
Lsm1Q8VC85 Gm25666-201ENSMUST00000157702 107 ntBASIC2.2□□□□□ -2.06
Lsm1Q8VC85 Gm25866-201ENSMUST00000158245 112 ntBASIC2.2□□□□□ -2.06
Lsm1Q8VC85 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.2□□□□□ -2.06
Lsm1Q8VC85 Gm17183-201ENSMUST00000171170 493 ntBASIC2.2□□□□□ -2.06
Lsm1Q8VC85 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Lsm1Q8VC85 Igkv13-64-201ENSMUST00000198143 343 ntBASIC2.2□□□□□ -2.06
Lsm1Q8VC85 Gm46389-201ENSMUST00000223199 392 ntBASIC2.2□□□□□ -2.06
Lsm1Q8VC85 Gm10038-201ENSMUST00000077233 441 ntBASIC2.2□□□□□ -2.06
Lsm1Q8VC85 Gm22806-201ENSMUST00000082738 136 ntBASIC2.2□□□□□ -2.06
Lsm1Q8VC85 Gm23247-201ENSMUST00000083373 107 ntBASIC2.2□□□□□ -2.06
Lsm1Q8VC85 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
Lsm1Q8VC85 Gm10343-201ENSMUST00000096279 348 ntBASIC2.2□□□□□ -2.06
Lsm1Q8VC85 Gm37296-201ENSMUST00000192728 2922 ntBASIC2.2□□□□□ -2.06
Lsm1Q8VC85 Gm24122-201ENSMUST00000104107 132 ntBASIC2.19□□□□□ -2.06
Lsm1Q8VC85 Gm23803-201ENSMUST00000104610 132 ntBASIC2.19□□□□□ -2.06
Lsm1Q8VC85 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Lsm1Q8VC85 Gm22151-201ENSMUST00000116963 58 ntBASIC2.19□□□□□ -2.06
Lsm1Q8VC85 Gm12156-201ENSMUST00000119188 554 ntBASIC2.19□□□□□ -2.06
Lsm1Q8VC85 Gm15193-201ENSMUST00000120224 865 ntBASIC2.19□□□□□ -2.06
Lsm1Q8VC85 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC2.19□□□□□ -2.06
Lsm1Q8VC85 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC2.19□□□□□ -2.06
Lsm1Q8VC85 Gm26105-201ENSMUST00000157253 190 ntBASIC2.19□□□□□ -2.06
Lsm1Q8VC85 Gm24769-201ENSMUST00000158506 129 ntBASIC2.19□□□□□ -2.06
Lsm1Q8VC85 Gm22131-201ENSMUST00000178415 94 ntBASIC2.19□□□□□ -2.06
Lsm1Q8VC85 Gm27532-201ENSMUST00000183726 113 ntBASIC2.19□□□□□ -2.06
Lsm1Q8VC85 Gm7634-201ENSMUST00000185778 553 ntBASIC2.19□□□□□ -2.06
Lsm1Q8VC85 Gm6445-201ENSMUST00000189515 1112 ntBASIC2.19□□□□□ -2.06
Lsm1Q8VC85 Gm44041-201ENSMUST00000203678 396 ntBASIC2.19□□□□□ -2.06
Lsm1Q8VC85 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC2.19□□□□□ -2.06
Lsm1Q8VC85 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC2.19□□□□□ -2.06
Lsm1Q8VC85 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Lsm1Q8VC85 AC069561.3-201ENSMUST00000217321 114 ntBASIC2.19□□□□□ -2.06
Lsm1Q8VC85 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC2.19□□□□□ -2.06
Lsm1Q8VC85 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Lsm1Q8VC85 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Lsm1Q8VC85 Mir30d-201ENSMUST00000083503 82 ntBASIC2.19□□□□□ -2.06
Lsm1Q8VC85 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Lsm1Q8VC85 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Lsm1Q8VC85 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.18□□□□□ -2.06
Lsm1Q8VC85 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Lsm1Q8VC85 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.18□□□□□ -2.06
Lsm1Q8VC85 Gm15381-201ENSMUST00000121501 1156 ntBASIC2.18□□□□□ -2.06
Lsm1Q8VC85 Gm14840-201ENSMUST00000122135 594 ntBASIC2.18□□□□□ -2.06
Lsm1Q8VC85 n-R5s216-201ENSMUST00000122755 112 ntBASIC2.18□□□□□ -2.06
Lsm1Q8VC85 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Lsm1Q8VC85 Gm22083-201ENSMUST00000157586 102 ntBASIC2.18□□□□□ -2.06
Lsm1Q8VC85 Gm24691-201ENSMUST00000157762 140 ntBASIC2.18□□□□□ -2.06
Lsm1Q8VC85 Gm25066-201ENSMUST00000158145 123 ntBASIC2.18□□□□□ -2.06
Lsm1Q8VC85 Gm22534-201ENSMUST00000158173 104 ntBASIC2.18□□□□□ -2.06
Lsm1Q8VC85 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC2.18□□□□□ -2.06
Lsm1Q8VC85 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC2.18□□□□□ -2.06
Lsm1Q8VC85 Gm5709-201ENSMUST00000177879 1165 ntBASIC2.18□□□□□ -2.06
Lsm1Q8VC85 Gm27715-201ENSMUST00000184714 260 ntBASIC2.18□□□□□ -2.06
Lsm1Q8VC85 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC2.18□□□□□ -2.06
Lsm1Q8VC85 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC2.18□□□□□ -2.06
Lsm1Q8VC85 AC153529.1-201ENSMUST00000217818 370 ntBASIC2.18□□□□□ -2.06
Lsm1Q8VC85 CT030166.2-201ENSMUST00000222021 368 ntBASIC2.18□□□□□ -2.06
Lsm1Q8VC85 AC164597.2-201ENSMUST00000226738 603 ntBASIC2.18□□□□□ -2.06
Lsm1Q8VC85 AC150560.3-201ENSMUST00000227442 455 ntBASIC2.18□□□□□ -2.06
Lsm1Q8VC85 Mir193a-201ENSMUST00000083461 66 ntBASIC2.18□□□□□ -2.06
Lsm1Q8VC85 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Lsm1Q8VC85 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
Lsm1Q8VC85 Gm649-201ENSMUST00000117284 1054 ntBASIC2.17□□□□□ -2.06
Lsm1Q8VC85 Gm14794-201ENSMUST00000118181 192 ntBASIC2.17□□□□□ -2.06
Lsm1Q8VC85 Snrpert-201ENSMUST00000121967 279 ntBASIC2.17□□□□□ -2.06
Lsm1Q8VC85 Gm13406-201ENSMUST00000121991 256 ntBASIC2.17□□□□□ -2.06
Lsm1Q8VC85 Gm14333-201ENSMUST00000130484 264 ntBASIC2.17□□□□□ -2.06
Lsm1Q8VC85 Gm16510-201ENSMUST00000153501 249 ntBASIC2.17□□□□□ -2.06
Lsm1Q8VC85 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC2.17□□□□□ -2.06
Lsm1Q8VC85 Gm16326-201ENSMUST00000162843 414 ntBASIC2.17□□□□□ -2.06
Lsm1Q8VC85 Gm4540-201ENSMUST00000170669 429 ntBASIC2.17□□□□□ -2.06
Lsm1Q8VC85 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC2.17□□□□□ -2.06
Lsm1Q8VC85 Gm24304-201ENSMUST00000177635 107 ntBASIC2.17□□□□□ -2.06
Lsm1Q8VC85 Gm26365-201ENSMUST00000179177 94 ntBASIC2.17□□□□□ -2.06
Lsm1Q8VC85 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC2.17□□□□□ -2.06
Lsm1Q8VC85 Gm28399-201ENSMUST00000186221 318 ntBASIC2.17□□□□□ -2.06
Lsm1Q8VC85 Gm28572-201ENSMUST00000187444 318 ntBASIC2.17□□□□□ -2.06
Lsm1Q8VC85 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.17□□□□□ -2.06
Lsm1Q8VC85 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC2.17□□□□□ -2.06
Lsm1Q8VC85 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC2.17□□□□□ -2.06
Lsm1Q8VC85 Gm42924-201ENSMUST00000197261 185 ntBASIC2.17□□□□□ -2.06
Lsm1Q8VC85 AC154296.1-201ENSMUST00000198150 67 ntBASIC2.17□□□□□ -2.06
Lsm1Q8VC85 Gm29920-201ENSMUST00000206876 754 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms