Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm44887-201ENSMUST00000208980 178 ntBASIC4.2□□□□□ -1.74
Ushbp1Q8R370 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC4.2□□□□□ -1.74
Ushbp1Q8R370 Gm5023-201ENSMUST00000217442 587 ntBASIC4.2□□□□□ -1.74
Ushbp1Q8R370 AC138401.2-201ENSMUST00000220461 365 ntBASIC4.2□□□□□ -1.74
Ushbp1Q8R370 AC126554.1-201ENSMUST00000222161 271 ntBASIC4.2□□□□□ -1.74
Ushbp1Q8R370 CT010506.3-201ENSMUST00000223699 410 ntBASIC4.2□□□□□ -1.74
Ushbp1Q8R370 AC161572.1-201ENSMUST00000227486 640 ntBASIC4.2□□□□□ -1.74
Ushbp1Q8R370 Gm26055-201ENSMUST00000083038 107 ntBASIC4.2□□□□□ -1.74
Ushbp1Q8R370 Gm23851-201ENSMUST00000083831 103 ntBASIC4.2□□□□□ -1.74
Ushbp1Q8R370 Gm42768-201ENSMUST00000197734 2897 ntBASIC4.2□□□□□ -1.74
Ushbp1Q8R370 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Ushbp1Q8R370 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Ushbp1Q8R370 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Ushbp1Q8R370 Gm15975-201ENSMUST00000122385 1402 ntBASIC4.2□□□□□ -1.74
Ushbp1Q8R370 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Ushbp1Q8R370 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
Ushbp1Q8R370 AC132237.1-201ENSMUST00000220950 4475 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
Ushbp1Q8R370 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Snord116l9-201ENSMUST00000101891 94 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Gm26504-201ENSMUST00000102033 94 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Gm22590-201ENSMUST00000104247 128 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Gm22988-201ENSMUST00000122759 144 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Gm16038-201ENSMUST00000159317 193 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Gm22258-201ENSMUST00000177645 94 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Gm26502-201ENSMUST00000177732 94 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Snord116l13-201ENSMUST00000177737 94 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Gm25350-201ENSMUST00000177849 94 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Snord116l15-201ENSMUST00000177940 94 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Gm23446-201ENSMUST00000177977 94 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Snord116l4-201ENSMUST00000177982 94 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Gm26201-201ENSMUST00000178047 94 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Gm26430-201ENSMUST00000178054 107 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Gm24711-201ENSMUST00000178062 94 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Gm24609-201ENSMUST00000178166 94 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Gm23265-201ENSMUST00000178321 94 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Gm22812-201ENSMUST00000178329 94 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Snord116l3-201ENSMUST00000178370 94 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Gm26246-201ENSMUST00000178388 94 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Gm22131-201ENSMUST00000178415 94 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Gm25155-201ENSMUST00000178450 94 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Gm24760-201ENSMUST00000178530 94 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Gm26032-201ENSMUST00000178535 94 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Gm22285-201ENSMUST00000178576 94 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Gm22417-201ENSMUST00000178656 94 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Snord116l2-201ENSMUST00000178675 94 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Gm26270-201ENSMUST00000178690 94 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Snord116l16-201ENSMUST00000178777 94 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Gm25210-201ENSMUST00000178813 94 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Gm25157-201ENSMUST00000178914 94 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Gm23313-201ENSMUST00000178931 94 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Snord116l17-201ENSMUST00000178936 94 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Gm23089-201ENSMUST00000178947 94 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Gm22046-201ENSMUST00000179027 94 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Snord116l10-201ENSMUST00000179053 94 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Gm24153-201ENSMUST00000179280 94 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Gm25597-201ENSMUST00000179388 94 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Snord116l1-201ENSMUST00000179518 94 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Gm22941-201ENSMUST00000179630 94 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Gm25816-201ENSMUST00000179764 94 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Snord116l14-201ENSMUST00000179875 94 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Snord116l8-201ENSMUST00000179889 94 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Snord116l7-201ENSMUST00000179895 94 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Snord116l5-201ENSMUST00000179927 94 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Snord116l6-201ENSMUST00000179955 94 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Gm26188-201ENSMUST00000179963 94 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Gm25471-201ENSMUST00000180126 94 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Gm26433-201ENSMUST00000180227 94 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Snord116l11-201ENSMUST00000180312 94 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Gm23862-201ENSMUST00000180342 94 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Gm22128-201ENSMUST00000180346 94 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Ushbp1Q8R370 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Gm44041-201ENSMUST00000203678 396 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Ushbp1Q8R370 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Gm5175-202ENSMUST00000219699 529 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 AC113031.5-201ENSMUST00000227116 606 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Gm26107-201ENSMUST00000083972 107 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Gm5670-201ENSMUST00000093546 372 ntBASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Ushbp1Q8R370 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Ushbp1Q8R370 Gm44525-201ENSMUST00000183129 2634 ntBASIC4.18□□□□□ -1.74
Ushbp1Q8R370 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 91.5 ms