Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm12884-201ENSMUST00000120371 325 ntBASIC3.85□□□□□ -1.79
Clrn1Q8K445 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Clrn1Q8K445 Gm23905-201ENSMUST00000157568 109 ntBASIC3.85□□□□□ -1.79
Clrn1Q8K445 Mir195b-201ENSMUST00000184814 97 ntBASIC3.85□□□□□ -1.79
Clrn1Q8K445 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.85□□□□□ -1.79
Clrn1Q8K445 Gm38270-201ENSMUST00000192721 407 ntBASIC3.85□□□□□ -1.79
Clrn1Q8K445 Ighv1-32-201ENSMUST00000195149 351 ntBASIC3.85□□□□□ -1.79
Clrn1Q8K445 AC153864.2-201ENSMUST00000220424 292 ntBASIC3.85□□□□□ -1.79
Clrn1Q8K445 AC139294.1-201ENSMUST00000226708 571 ntBASIC3.85□□□□□ -1.79
Clrn1Q8K445 AC126440.1-201ENSMUST00000227098 349 ntBASIC3.85□□□□□ -1.79
Clrn1Q8K445 AC154276.2-201ENSMUST00000227707 309 ntBASIC3.85□□□□□ -1.79
Clrn1Q8K445 AC155167.1-201ENSMUST00000228931 614 ntBASIC3.85□□□□□ -1.79
Clrn1Q8K445 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Clrn1Q8K445 Snora23-201ENSMUST00000082517 184 ntBASIC3.85□□□□□ -1.79
Clrn1Q8K445 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Clrn1Q8K445 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Clrn1Q8K445 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Clrn1Q8K445 AC154313.1-201ENSMUST00000217755 3841 ntBASIC3.85□□□□□ -1.79
Clrn1Q8K445 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Clrn1Q8K445 Gm43047-201ENSMUST00000200089 3460 ntBASIC3.85□□□□□ -1.79
Clrn1Q8K445 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Clrn1Q8K445 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
Clrn1Q8K445 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC3.84□□□□□ -1.79
Clrn1Q8K445 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
Clrn1Q8K445 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Clrn1Q8K445 Gm36969-201ENSMUST00000194551 2809 ntBASIC3.84□□□□□ -1.79
Clrn1Q8K445 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
Clrn1Q8K445 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Clrn1Q8K445 Gm22496-201ENSMUST00000104493 88 ntBASIC3.84□□□□□ -1.79
Clrn1Q8K445 Gm25565-201ENSMUST00000104605 105 ntBASIC3.84□□□□□ -1.79
Clrn1Q8K445 Gm22488-201ENSMUST00000116811 127 ntBASIC3.84□□□□□ -1.79
Clrn1Q8K445 Gm14656-201ENSMUST00000120342 502 ntBASIC3.84□□□□□ -1.79
Clrn1Q8K445 Gm11384-201ENSMUST00000121376 303 ntBASIC3.84□□□□□ -1.79
Clrn1Q8K445 Gm12693-201ENSMUST00000121965 483 ntBASIC3.84□□□□□ -1.79
Clrn1Q8K445 Gm27926-201ENSMUST00000157180 66 ntBASIC3.84□□□□□ -1.79
Clrn1Q8K445 Gm22637-201ENSMUST00000158144 283 ntBASIC3.84□□□□□ -1.79
Clrn1Q8K445 Gm26024-201ENSMUST00000158657 322 ntBASIC3.84□□□□□ -1.79
Clrn1Q8K445 Gm22395-201ENSMUST00000177427 96 ntBASIC3.84□□□□□ -1.79
Clrn1Q8K445 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC3.84□□□□□ -1.79
Clrn1Q8K445 Gm25175-201ENSMUST00000178712 79 ntBASIC3.84□□□□□ -1.79
Clrn1Q8K445 Mir6960-201ENSMUST00000183449 61 ntBASIC3.84□□□□□ -1.79
Clrn1Q8K445 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Clrn1Q8K445 Gm29665-201ENSMUST00000191457 528 ntBASIC3.84□□□□□ -1.79
Clrn1Q8K445 Igkv4-65-201ENSMUST00000196986 358 ntBASIC3.84□□□□□ -1.79
Clrn1Q8K445 Gm19177-201ENSMUST00000204520 613 ntBASIC3.84□□□□□ -1.79
Clrn1Q8K445 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC3.84□□□□□ -1.79
Clrn1Q8K445 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC3.84□□□□□ -1.79
Clrn1Q8K445 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC3.84□□□□□ -1.79
Clrn1Q8K445 Mir21a-201ENSMUST00000083521 92 ntBASIC3.84□□□□□ -1.79
Clrn1Q8K445 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Clrn1Q8K445 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Clrn1Q8K445 AC135119.1-201ENSMUST00000227935 3717 ntBASIC3.84□□□□□ -1.8
Clrn1Q8K445 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
Clrn1Q8K445 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
Clrn1Q8K445 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
Clrn1Q8K445 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
Clrn1Q8K445 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Clrn1Q8K445 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Clrn1Q8K445 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Clrn1Q8K445 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Clrn1Q8K445 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Clrn1Q8K445 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.83□□□□□ -1.8
Clrn1Q8K445 Gm24067-201ENSMUST00000104514 85 ntBASIC3.83□□□□□ -1.8
Clrn1Q8K445 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC3.83□□□□□ -1.8
Clrn1Q8K445 Gm15994-201ENSMUST00000118029 402 ntBASIC3.83□□□□□ -1.8
Clrn1Q8K445 Gm14841-201ENSMUST00000121067 758 ntBASIC3.83□□□□□ -1.8
Clrn1Q8K445 Gm2182-201ENSMUST00000145243 663 ntBASIC3.83□□□□□ -1.8
Clrn1Q8K445 Gm22098-201ENSMUST00000157930 85 ntBASIC3.83□□□□□ -1.8
Clrn1Q8K445 Gm27579-201ENSMUST00000158113 63 ntBASIC3.83□□□□□ -1.8
Clrn1Q8K445 Gm23704-201ENSMUST00000158844 340 ntBASIC3.83□□□□□ -1.8
Clrn1Q8K445 Gm25362-201ENSMUST00000158854 105 ntBASIC3.83□□□□□ -1.8
Clrn1Q8K445 Gm25643-201ENSMUST00000158874 103 ntBASIC3.83□□□□□ -1.8
Clrn1Q8K445 Mir5134-201ENSMUST00000175529 78 ntBASIC3.83□□□□□ -1.8
Clrn1Q8K445 Gm19898-201ENSMUST00000177490 251 ntBASIC3.83□□□□□ -1.8
Clrn1Q8K445 Gm28263-201ENSMUST00000185884 400 ntBASIC3.83□□□□□ -1.8
Clrn1Q8K445 Gm43284-201ENSMUST00000200103 253 ntBASIC3.83□□□□□ -1.8
Clrn1Q8K445 Fth-ps3-201ENSMUST00000210405 358 ntBASIC3.83□□□□□ -1.8
Clrn1Q8K445 Gm45313-201ENSMUST00000210584 178 ntBASIC3.83□□□□□ -1.8
Clrn1Q8K445 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC3.83□□□□□ -1.8
Clrn1Q8K445 AC130821.1-201ENSMUST00000221997 293 ntBASIC3.83□□□□□ -1.8
Clrn1Q8K445 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.83□□□□□ -1.8
Clrn1Q8K445 CT025536.1-201ENSMUST00000226744 844 ntBASIC3.83□□□□□ -1.8
Clrn1Q8K445 Gm24042-201ENSMUST00000083114 103 ntBASIC3.83□□□□□ -1.8
Clrn1Q8K445 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
Clrn1Q8K445 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Clrn1Q8K445 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Clrn1Q8K445 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Clrn1Q8K445 Gm37899-201ENSMUST00000193116 8717 ntBASIC3.83□□□□□ -1.8
Clrn1Q8K445 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Clrn1Q8K445 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Clrn1Q8K445 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Clrn1Q8K445 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Clrn1Q8K445 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Clrn1Q8K445 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Clrn1Q8K445 Gm43327-201ENSMUST00000199285 4055 ntBASIC3.82□□□□□ -1.8
Clrn1Q8K445 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Clrn1Q8K445 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.82□□□□□ -1.8
Clrn1Q8K445 Mir294-201ENSMUST00000104710 84 ntBASIC3.82□□□□□ -1.8
Clrn1Q8K445 Gm16242-201ENSMUST00000117741 334 ntBASIC3.82□□□□□ -1.8
Clrn1Q8K445 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms