Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Gm23112-201ENSMUST00000158606 125 ntBASIC3.93□□□□□ -1.78
Ccdc87Q8CDL9 Gm22890-201ENSMUST00000158642 144 ntBASIC3.93□□□□□ -1.78
Ccdc87Q8CDL9 Gm16290-201ENSMUST00000161175 474 ntBASIC3.93□□□□□ -1.78
Ccdc87Q8CDL9 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
Ccdc87Q8CDL9 Gm17186-201ENSMUST00000171742 456 ntBASIC3.93□□□□□ -1.78
Ccdc87Q8CDL9 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC3.93□□□□□ -1.78
Ccdc87Q8CDL9 Gm23725-201ENSMUST00000177876 107 ntBASIC3.93□□□□□ -1.78
Ccdc87Q8CDL9 Gm24168-201ENSMUST00000178825 107 ntBASIC3.93□□□□□ -1.78
Ccdc87Q8CDL9 Gm26622-201ENSMUST00000180520 298 ntBASIC3.93□□□□□ -1.78
Ccdc87Q8CDL9 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.93□□□□□ -1.78
Ccdc87Q8CDL9 Gm28860-201ENSMUST00000188103 313 ntBASIC3.93□□□□□ -1.78
Ccdc87Q8CDL9 Gm29704-201ENSMUST00000196011 253 ntBASIC3.93□□□□□ -1.78
Ccdc87Q8CDL9 Gm43955-201ENSMUST00000204332 142 ntBASIC3.93□□□□□ -1.78
Ccdc87Q8CDL9 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC3.93□□□□□ -1.78
Ccdc87Q8CDL9 Gm18854-201ENSMUST00000211196 329 ntBASIC3.93□□□□□ -1.78
Ccdc87Q8CDL9 Gm4036-201ENSMUST00000220842 626 ntBASIC3.93□□□□□ -1.78
Ccdc87Q8CDL9 AC127270.2-201ENSMUST00000221337 247 ntBASIC3.93□□□□□ -1.78
Ccdc87Q8CDL9 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC3.93□□□□□ -1.78
Ccdc87Q8CDL9 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Ccdc87Q8CDL9 Gm23970-201ENSMUST00000083319 107 ntBASIC3.93□□□□□ -1.78
Ccdc87Q8CDL9 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.93□□□□□ -1.78
Ccdc87Q8CDL9 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Ccdc87Q8CDL9 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Ccdc87Q8CDL9 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Ccdc87Q8CDL9 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
Ccdc87Q8CDL9 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.92□□□□□ -1.78
Ccdc87Q8CDL9 Gm14390-201ENSMUST00000117505 1695 ntBASIC3.92□□□□□ -1.78
Ccdc87Q8CDL9 Gm12255-201ENSMUST00000117184 284 ntBASIC3.92□□□□□ -1.78
Ccdc87Q8CDL9 Gm12458-201ENSMUST00000119387 495 ntBASIC3.92□□□□□ -1.78
Ccdc87Q8CDL9 Gm15106-201ENSMUST00000119691 821 ntBASIC3.92□□□□□ -1.78
Ccdc87Q8CDL9 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC3.92□□□□□ -1.78
Ccdc87Q8CDL9 Gm15223-201ENSMUST00000120989 826 ntBASIC3.92□□□□□ -1.78
Ccdc87Q8CDL9 Gm22957-201ENSMUST00000122511 123 ntBASIC3.92□□□□□ -1.78
Ccdc87Q8CDL9 n-R5s216-201ENSMUST00000122755 112 ntBASIC3.92□□□□□ -1.78
Ccdc87Q8CDL9 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC3.92□□□□□ -1.78
Ccdc87Q8CDL9 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC3.92□□□□□ -1.78
Ccdc87Q8CDL9 Gm25391-201ENSMUST00000157342 134 ntBASIC3.92□□□□□ -1.78
Ccdc87Q8CDL9 Gm22889-201ENSMUST00000158639 58 ntBASIC3.92□□□□□ -1.78
Ccdc87Q8CDL9 Gm17148-201ENSMUST00000164702 249 ntBASIC3.92□□□□□ -1.78
Ccdc87Q8CDL9 Gm23053-201ENSMUST00000175136 96 ntBASIC3.92□□□□□ -1.78
Ccdc87Q8CDL9 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC3.92□□□□□ -1.78
Ccdc87Q8CDL9 Gm25817-201ENSMUST00000177758 121 ntBASIC3.92□□□□□ -1.78
Ccdc87Q8CDL9 Gm24766-201ENSMUST00000179182 121 ntBASIC3.92□□□□□ -1.78
Ccdc87Q8CDL9 Mir6951-201ENSMUST00000183910 75 ntBASIC3.92□□□□□ -1.78
Ccdc87Q8CDL9 Gm28755-201ENSMUST00000185773 199 ntBASIC3.92□□□□□ -1.78
Ccdc87Q8CDL9 Gm6947-201ENSMUST00000186254 78 ntBASIC3.92□□□□□ -1.78
Ccdc87Q8CDL9 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC3.92□□□□□ -1.78
Ccdc87Q8CDL9 Gm37104-201ENSMUST00000193278 196 ntBASIC3.92□□□□□ -1.78
Ccdc87Q8CDL9 Gm38356-201ENSMUST00000194313 408 ntBASIC3.92□□□□□ -1.78
Ccdc87Q8CDL9 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC3.92□□□□□ -1.78
Ccdc87Q8CDL9 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Ccdc87Q8CDL9 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Ccdc87Q8CDL9 Gm45162-201ENSMUST00000209013 618 ntBASIC3.92□□□□□ -1.78
Ccdc87Q8CDL9 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC3.92□□□□□ -1.78
Ccdc87Q8CDL9 Gm7692-201ENSMUST00000213534 409 ntBASIC3.92□□□□□ -1.78
Ccdc87Q8CDL9 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Ccdc87Q8CDL9 Gm5265-201ENSMUST00000076828 342 ntBASIC3.92□□□□□ -1.78
Ccdc87Q8CDL9 Gm25481-201ENSMUST00000083221 158 ntBASIC3.92□□□□□ -1.78
Ccdc87Q8CDL9 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.92□□□□□ -1.78
Ccdc87Q8CDL9 Gm22365-201ENSMUST00000093750 117 ntBASIC3.92□□□□□ -1.78
Ccdc87Q8CDL9 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Ccdc87Q8CDL9 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Ccdc87Q8CDL9 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Ccdc87Q8CDL9 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Ccdc87Q8CDL9 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
Ccdc87Q8CDL9 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Ccdc87Q8CDL9 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Ccdc87Q8CDL9 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Ccdc87Q8CDL9 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC3.91□□□□□ -1.78
Ccdc87Q8CDL9 Gm23422-201ENSMUST00000102000 107 ntBASIC3.91□□□□□ -1.78
Ccdc87Q8CDL9 Gm23256-201ENSMUST00000102235 110 ntBASIC3.91□□□□□ -1.78
Ccdc87Q8CDL9 Gm26140-201ENSMUST00000103807 110 ntBASIC3.91□□□□□ -1.78
Ccdc87Q8CDL9 Gm26148-201ENSMUST00000157430 68 ntBASIC3.91□□□□□ -1.78
Ccdc87Q8CDL9 Gm22521-201ENSMUST00000158272 134 ntBASIC3.91□□□□□ -1.78
Ccdc87Q8CDL9 Gm26028-201ENSMUST00000158660 294 ntBASIC3.91□□□□□ -1.78
Ccdc87Q8CDL9 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Ccdc87Q8CDL9 Gm22908-201ENSMUST00000177620 110 ntBASIC3.91□□□□□ -1.78
Ccdc87Q8CDL9 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Ccdc87Q8CDL9 Gm25198-201ENSMUST00000178574 110 ntBASIC3.91□□□□□ -1.78
Ccdc87Q8CDL9 Gm23816-201ENSMUST00000179617 132 ntBASIC3.91□□□□□ -1.78
Ccdc87Q8CDL9 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Ccdc87Q8CDL9 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Ccdc87Q8CDL9 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC3.91□□□□□ -1.78
Ccdc87Q8CDL9 Gm7329-201ENSMUST00000185915 210 ntBASIC3.91□□□□□ -1.78
Ccdc87Q8CDL9 Gm9722-201ENSMUST00000194568 802 ntBASIC3.91□□□□□ -1.78
Ccdc87Q8CDL9 Gm37399-201ENSMUST00000195224 416 ntBASIC3.91□□□□□ -1.78
Ccdc87Q8CDL9 Gm37029-201ENSMUST00000195773 239 ntBASIC3.91□□□□□ -1.78
Ccdc87Q8CDL9 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Ccdc87Q8CDL9 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC3.91□□□□□ -1.78
Ccdc87Q8CDL9 Gm44030-201ENSMUST00000204865 432 ntBASIC3.91□□□□□ -1.78
Ccdc87Q8CDL9 Gm35857-201ENSMUST00000212739 178 ntBASIC3.91□□□□□ -1.78
Ccdc87Q8CDL9 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Ccdc87Q8CDL9 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC3.91□□□□□ -1.78
Ccdc87Q8CDL9 CT009718.4-201ENSMUST00000221881 109 ntBASIC3.91□□□□□ -1.78
Ccdc87Q8CDL9 AC126554.1-201ENSMUST00000222161 271 ntBASIC3.91□□□□□ -1.78
Ccdc87Q8CDL9 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.91□□□□□ -1.78
Ccdc87Q8CDL9 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Ccdc87Q8CDL9 Gm22245-201ENSMUST00000082479 103 ntBASIC3.91□□□□□ -1.78
Ccdc87Q8CDL9 Gm22577-201ENSMUST00000083731 109 ntBASIC3.91□□□□□ -1.78
Ccdc87Q8CDL9 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms