Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm43896-201ENSMUST00000203440 2032 ntBASIC4.12□□□□□ -1.75
Vps53Q8CCB4 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Vps53Q8CCB4 Gm14825-201ENSMUST00000113538 701 ntBASIC4.12□□□□□ -1.75
Vps53Q8CCB4 Gm14880-201ENSMUST00000117581 292 ntBASIC4.12□□□□□ -1.75
Vps53Q8CCB4 Gm13082-201ENSMUST00000118877 561 ntBASIC4.12□□□□□ -1.75
Vps53Q8CCB4 Gm13475-201ENSMUST00000119290 234 ntBASIC4.12□□□□□ -1.75
Vps53Q8CCB4 Gm13368-201ENSMUST00000122443 430 ntBASIC4.12□□□□□ -1.75
Vps53Q8CCB4 Gm23602-201ENSMUST00000157258 132 ntBASIC4.12□□□□□ -1.75
Vps53Q8CCB4 Gm23755-201ENSMUST00000157578 343 ntBASIC4.12□□□□□ -1.75
Vps53Q8CCB4 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC4.12□□□□□ -1.75
Vps53Q8CCB4 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Vps53Q8CCB4 Gm25397-201ENSMUST00000176951 92 ntBASIC4.12□□□□□ -1.75
Vps53Q8CCB4 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC4.12□□□□□ -1.75
Vps53Q8CCB4 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC4.12□□□□□ -1.75
Vps53Q8CCB4 Gm2189-201ENSMUST00000201419 429 ntBASIC4.12□□□□□ -1.75
Vps53Q8CCB4 Gm44720-201ENSMUST00000206076 260 ntBASIC4.12□□□□□ -1.75
Vps53Q8CCB4 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC4.12□□□□□ -1.75
Vps53Q8CCB4 Gm45614-201ENSMUST00000209994 721 ntBASIC4.12□□□□□ -1.75
Vps53Q8CCB4 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC4.12□□□□□ -1.75
Vps53Q8CCB4 AC118639.1-201ENSMUST00000227204 338 ntBASIC4.12□□□□□ -1.75
Vps53Q8CCB4 Gm23627-201ENSMUST00000082459 107 ntBASIC4.12□□□□□ -1.75
Vps53Q8CCB4 Gm22502-201ENSMUST00000082488 107 ntBASIC4.12□□□□□ -1.75
Vps53Q8CCB4 Gm23404-201ENSMUST00000082543 97 ntBASIC4.12□□□□□ -1.75
Vps53Q8CCB4 Gm24149-201ENSMUST00000082757 107 ntBASIC4.12□□□□□ -1.75
Vps53Q8CCB4 AF357428-201ENSMUST00000083815 69 ntBASIC4.12□□□□□ -1.75
Vps53Q8CCB4 Gm10212-201ENSMUST00000087884 324 ntBASIC4.12□□□□□ -1.75
Vps53Q8CCB4 Gm10161-201ENSMUST00000091506 204 ntBASIC4.12□□□□□ -1.75
Vps53Q8CCB4 AC158921.1-201ENSMUST00000227861 3468 ntBASIC4.12□□□□□ -1.75
Vps53Q8CCB4 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Vps53Q8CCB4 AC154481.2-201ENSMUST00000222526 3175 ntBASIC4.11□□□□□ -1.75
Vps53Q8CCB4 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Vps53Q8CCB4 Gm42909-201ENSMUST00000196982 3619 ntBASIC4.11□□□□□ -1.75
Vps53Q8CCB4 BC051076-202ENSMUST00000199477 2868 ntBASIC4.11□□□□□ -1.75
Vps53Q8CCB4 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
Vps53Q8CCB4 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Vps53Q8CCB4 Gm24835-201ENSMUST00000116777 111 ntBASIC4.11□□□□□ -1.75
Vps53Q8CCB4 Gm24275-201ENSMUST00000116780 146 ntBASIC4.11□□□□□ -1.75
Vps53Q8CCB4 Gm15026-201ENSMUST00000119219 458 ntBASIC4.11□□□□□ -1.75
Vps53Q8CCB4 Gm12787-201ENSMUST00000119234 396 ntBASIC4.11□□□□□ -1.75
Vps53Q8CCB4 Gm14570-201ENSMUST00000119444 391 ntBASIC4.11□□□□□ -1.75
Vps53Q8CCB4 Gm16362-201ENSMUST00000135189 214 ntBASIC4.11□□□□□ -1.75
Vps53Q8CCB4 Gm26045-201ENSMUST00000157862 97 ntBASIC4.11□□□□□ -1.75
Vps53Q8CCB4 Gm6264-202ENSMUST00000162896 1217 ntBASIC4.11□□□□□ -1.75
Vps53Q8CCB4 Gm20399-201ENSMUST00000174652 132 ntBASIC4.11□□□□□ -1.75
Vps53Q8CCB4 Gm27903-201ENSMUST00000175482 126 ntBASIC4.11□□□□□ -1.75
Vps53Q8CCB4 Gm28010-201ENSMUST00000179485 126 ntBASIC4.11□□□□□ -1.75
Vps53Q8CCB4 Gm28700-201ENSMUST00000187614 579 ntBASIC4.11□□□□□ -1.75
Vps53Q8CCB4 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC4.11□□□□□ -1.75
Vps53Q8CCB4 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC4.11□□□□□ -1.75
Vps53Q8CCB4 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Vps53Q8CCB4 Gm32447-201ENSMUST00000194265 697 ntBASIC4.11□□□□□ -1.75
Vps53Q8CCB4 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC4.11□□□□□ -1.75
Vps53Q8CCB4 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC4.11□□□□□ -1.75
Vps53Q8CCB4 AC161054.1-201ENSMUST00000214319 184 ntBASIC4.11□□□□□ -1.75
Vps53Q8CCB4 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC4.11□□□□□ -1.75
Vps53Q8CCB4 AC147240.1-201ENSMUST00000218767 431 ntBASIC4.11□□□□□ -1.75
Vps53Q8CCB4 Gm25792-201ENSMUST00000083289 100 ntBASIC4.11□□□□□ -1.75
Vps53Q8CCB4 Gm25581-201ENSMUST00000083410 164 ntBASIC4.11□□□□□ -1.75
Vps53Q8CCB4 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Vps53Q8CCB4 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Vps53Q8CCB4 Gm15902-202ENSMUST00000219623 3477 ntBASIC4.11□□□□□ -1.75
Vps53Q8CCB4 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC4.11□□□□□ -1.75
Vps53Q8CCB4 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Vps53Q8CCB4 Gm43883-201ENSMUST00000204002 3750 ntBASIC4.11□□□□□ -1.75
Vps53Q8CCB4 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Vps53Q8CCB4 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Vps53Q8CCB4 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Vps53Q8CCB4 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Vps53Q8CCB4 Gm24096-201ENSMUST00000103905 110 ntBASIC4.1□□□□□ -1.75
Vps53Q8CCB4 Gm24374-201ENSMUST00000104394 106 ntBASIC4.1□□□□□ -1.75
Vps53Q8CCB4 Gm22032-201ENSMUST00000116946 116 ntBASIC4.1□□□□□ -1.75
Vps53Q8CCB4 Gm11322-201ENSMUST00000118095 435 ntBASIC4.1□□□□□ -1.75
Vps53Q8CCB4 Gm25781-201ENSMUST00000122527 84 ntBASIC4.1□□□□□ -1.75
Vps53Q8CCB4 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC4.1□□□□□ -1.75
Vps53Q8CCB4 Gm22534-201ENSMUST00000158173 104 ntBASIC4.1□□□□□ -1.75
Vps53Q8CCB4 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
Vps53Q8CCB4 Gm24464-201ENSMUST00000179697 107 ntBASIC4.1□□□□□ -1.75
Vps53Q8CCB4 Gm7656-201ENSMUST00000182468 1004 ntBASIC4.1□□□□□ -1.75
Vps53Q8CCB4 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Vps53Q8CCB4 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
Vps53Q8CCB4 Gm28299-201ENSMUST00000189908 339 ntBASIC4.1□□□□□ -1.75
Vps53Q8CCB4 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Vps53Q8CCB4 Gm20039-201ENSMUST00000210329 394 ntBASIC4.1□□□□□ -1.75
Vps53Q8CCB4 AC167250.1-201ENSMUST00000213739 3813 ntBASIC4.1□□□□□ -1.75
Vps53Q8CCB4 Gm20102-201ENSMUST00000222445 220 ntBASIC4.1□□□□□ -1.75
Vps53Q8CCB4 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Vps53Q8CCB4 AC153801.2-201ENSMUST00000219875 3372 ntBASIC4.1□□□□□ -1.75
Vps53Q8CCB4 Gm43047-201ENSMUST00000200089 3460 ntBASIC4.1□□□□□ -1.75
Vps53Q8CCB4 Gm38388-201ENSMUST00000195569 1430 ntBASIC4.1□□□□□ -1.75
Vps53Q8CCB4 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Vps53Q8CCB4 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
Vps53Q8CCB4 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Vps53Q8CCB4 Gm37879-201ENSMUST00000193112 1995 ntBASIC4.09□□□□□ -1.75
Vps53Q8CCB4 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
Vps53Q8CCB4 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC4.09□□□□□ -1.75
Vps53Q8CCB4 Gm23609-201ENSMUST00000104542 127 ntBASIC4.09□□□□□ -1.75
Vps53Q8CCB4 Gm12982-201ENSMUST00000117408 190 ntBASIC4.09□□□□□ -1.75
Vps53Q8CCB4 Gm14681-201ENSMUST00000118047 411 ntBASIC4.09□□□□□ -1.75
Vps53Q8CCB4 Gm11490-201ENSMUST00000118128 272 ntBASIC4.09□□□□□ -1.75
Vps53Q8CCB4 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 94.8 ms