Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC1.28□□□□□ -2.2
Col6a6Q8C6K9 Gm23249-201ENSMUST00000083369 161 ntBASIC1.28□□□□□ -2.2
Col6a6Q8C6K9 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC1.27□□□□□ -2.21
Col6a6Q8C6K9 Gm15314-201ENSMUST00000120740 1887 ntBASIC1.27□□□□□ -2.21
Col6a6Q8C6K9 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.27□□□□□ -2.21
Col6a6Q8C6K9 Gm14927-201ENSMUST00000120283 454 ntBASIC1.27□□□□□ -2.21
Col6a6Q8C6K9 Gm26099-201ENSMUST00000157248 109 ntBASIC1.27□□□□□ -2.21
Col6a6Q8C6K9 Gm23558-201ENSMUST00000157823 80 ntBASIC1.27□□□□□ -2.21
Col6a6Q8C6K9 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC1.27□□□□□ -2.21
Col6a6Q8C6K9 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC1.27□□□□□ -2.21
Col6a6Q8C6K9 Gm24863-201ENSMUST00000179499 107 ntBASIC1.27□□□□□ -2.21
Col6a6Q8C6K9 AC135019.1-201ENSMUST00000219949 307 ntBASIC1.27□□□□□ -2.21
Col6a6Q8C6K9 CT009713.9-201ENSMUST00000223604 389 ntBASIC1.27□□□□□ -2.21
Col6a6Q8C6K9 AC122418.1-201ENSMUST00000225012 511 ntBASIC1.27□□□□□ -2.21
Col6a6Q8C6K9 n-R5s196-201ENSMUST00000083136 117 ntBASIC1.27□□□□□ -2.21
Col6a6Q8C6K9 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.27□□□□□ -2.21
Col6a6Q8C6K9 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC1.27□□□□□ -2.21
Col6a6Q8C6K9 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.27□□□□□ -2.21
Col6a6Q8C6K9 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC1.27□□□□□ -2.21
Col6a6Q8C6K9 Gm11890-201ENSMUST00000119585 417 ntBASIC1.27□□□□□ -2.21
Col6a6Q8C6K9 Gm13273-201ENSMUST00000119737 159 ntBASIC1.27□□□□□ -2.21
Col6a6Q8C6K9 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
Col6a6Q8C6K9 Gm35931-201ENSMUST00000203931 448 ntBASIC1.27□□□□□ -2.21
Col6a6Q8C6K9 Gm44061-201ENSMUST00000203962 1195 ntBASIC1.27□□□□□ -2.21
Col6a6Q8C6K9 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC1.27□□□□□ -2.21
Col6a6Q8C6K9 AC153801.1-201ENSMUST00000217904 947 ntBASIC1.27□□□□□ -2.21
Col6a6Q8C6K9 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.27□□□□□ -2.21
Col6a6Q8C6K9 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
Col6a6Q8C6K9 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
Col6a6Q8C6K9 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
Col6a6Q8C6K9 Gm23708-201ENSMUST00000104367 123 ntBASIC1.26□□□□□ -2.21
Col6a6Q8C6K9 Gm14736-201ENSMUST00000121470 336 ntBASIC1.26□□□□□ -2.21
Col6a6Q8C6K9 Gm12372-201ENSMUST00000121654 768 ntBASIC1.26□□□□□ -2.21
Col6a6Q8C6K9 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.26□□□□□ -2.21
Col6a6Q8C6K9 Mir6379-201ENSMUST00000183392 115 ntBASIC1.26□□□□□ -2.21
Col6a6Q8C6K9 Mir6371-201ENSMUST00000184470 111 ntBASIC1.26□□□□□ -2.21
Col6a6Q8C6K9 Gm44476-201ENSMUST00000196225 91 ntBASIC1.26□□□□□ -2.21
Col6a6Q8C6K9 Gm19599-201ENSMUST00000218898 358 ntBASIC1.26□□□□□ -2.21
Col6a6Q8C6K9 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.26□□□□□ -2.21
Col6a6Q8C6K9 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
Col6a6Q8C6K9 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.26□□□□□ -2.21
Col6a6Q8C6K9 Gm7164-201ENSMUST00000117503 450 ntBASIC1.26□□□□□ -2.21
Col6a6Q8C6K9 Gm9440-201ENSMUST00000119667 539 ntBASIC1.26□□□□□ -2.21
Col6a6Q8C6K9 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC1.26□□□□□ -2.21
Col6a6Q8C6K9 Gm22519-201ENSMUST00000158270 178 ntBASIC1.26□□□□□ -2.21
Col6a6Q8C6K9 Gm23476-201ENSMUST00000158881 274 ntBASIC1.26□□□□□ -2.21
Col6a6Q8C6K9 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC1.26□□□□□ -2.21
Col6a6Q8C6K9 Gm27044-201ENSMUST00000183033 796 ntBASIC1.26□□□□□ -2.21
Col6a6Q8C6K9 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
Col6a6Q8C6K9 Gm18855-201ENSMUST00000206689 570 ntBASIC1.26□□□□□ -2.21
Col6a6Q8C6K9 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC1.26□□□□□ -2.21
Col6a6Q8C6K9 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC1.26□□□□□ -2.21
Col6a6Q8C6K9 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Col6a6Q8C6K9 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC1.26□□□□□ -2.21
Col6a6Q8C6K9 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC1.26□□□□□ -2.21
Col6a6Q8C6K9 CT030254.3-201ENSMUST00000225959 1231 ntBASIC1.26□□□□□ -2.21
Col6a6Q8C6K9 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC1.26□□□□□ -2.21
Col6a6Q8C6K9 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
Col6a6Q8C6K9 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC1.25□□□□□ -2.21
Col6a6Q8C6K9 Gm42852-201ENSMUST00000202649 1379 ntBASIC1.25□□□□□ -2.21
Col6a6Q8C6K9 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Col6a6Q8C6K9 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Col6a6Q8C6K9 Gm23015-201ENSMUST00000104145 128 ntBASIC1.25□□□□□ -2.21
Col6a6Q8C6K9 Gm24902-201ENSMUST00000158126 123 ntBASIC1.25□□□□□ -2.21
Col6a6Q8C6K9 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC1.25□□□□□ -2.21
Col6a6Q8C6K9 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Col6a6Q8C6K9 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
Col6a6Q8C6K9 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
Col6a6Q8C6K9 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC1.25□□□□□ -2.21
Col6a6Q8C6K9 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC1.25□□□□□ -2.21
Col6a6Q8C6K9 Gm7726-201ENSMUST00000206241 231 ntBASIC1.25□□□□□ -2.21
Col6a6Q8C6K9 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
Col6a6Q8C6K9 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC1.25□□□□□ -2.21
Col6a6Q8C6K9 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Col6a6Q8C6K9 Gm11352-201ENSMUST00000119264 517 ntBASIC1.24□□□□□ -2.21
Col6a6Q8C6K9 Mup-ps21-201ENSMUST00000119998 448 ntBASIC1.24□□□□□ -2.21
Col6a6Q8C6K9 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC1.24□□□□□ -2.21
Col6a6Q8C6K9 Gm24630-201ENSMUST00000122768 106 ntBASIC1.24□□□□□ -2.21
Col6a6Q8C6K9 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC1.24□□□□□ -2.21
Col6a6Q8C6K9 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
Col6a6Q8C6K9 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC1.24□□□□□ -2.21
Col6a6Q8C6K9 Gm24783-201ENSMUST00000157639 100 ntBASIC1.24□□□□□ -2.21
Col6a6Q8C6K9 Gm23505-201ENSMUST00000158989 130 ntBASIC1.24□□□□□ -2.21
Col6a6Q8C6K9 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Col6a6Q8C6K9 Gm42506-201ENSMUST00000202009 150 ntBASIC1.24□□□□□ -2.21
Col6a6Q8C6K9 Gm19237-201ENSMUST00000205036 1132 ntBASIC1.24□□□□□ -2.21
Col6a6Q8C6K9 Gm45189-201ENSMUST00000208567 363 ntBASIC1.24□□□□□ -2.21
Col6a6Q8C6K9 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC1.24□□□□□ -2.21
Col6a6Q8C6K9 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC1.24□□□□□ -2.21
Col6a6Q8C6K9 CT573422.1-201ENSMUST00000216655 405 ntBASIC1.24□□□□□ -2.21
Col6a6Q8C6K9 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC1.24□□□□□ -2.21
Col6a6Q8C6K9 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.24□□□□□ -2.21
Col6a6Q8C6K9 Gm22353-201ENSMUST00000083918 136 ntBASIC1.24□□□□□ -2.21
Col6a6Q8C6K9 Gm38162-201ENSMUST00000195562 4597 ntBASIC1.24□□□□□ -2.21
Col6a6Q8C6K9 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Col6a6Q8C6K9 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Col6a6Q8C6K9 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC1.24□□□□□ -2.21
Col6a6Q8C6K9 Gm25279-201ENSMUST00000122608 133 ntBASIC1.24□□□□□ -2.21
Col6a6Q8C6K9 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
Col6a6Q8C6K9 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms