Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC5.13□□□□□ -1.59
Trim47Q8C0E3 Gm43925-201ENSMUST00000203498 206 ntBASIC5.13□□□□□ -1.59
Trim47Q8C0E3 Gm45013-201ENSMUST00000206883 178 ntBASIC5.13□□□□□ -1.59
Trim47Q8C0E3 Gm18991-201ENSMUST00000209225 746 ntBASIC5.13□□□□□ -1.59
Trim47Q8C0E3 AC239878.1-201ENSMUST00000224212 506 ntBASIC5.13□□□□□ -1.59
Trim47Q8C0E3 Gm7117-201ENSMUST00000071515 387 ntBASIC5.13□□□□□ -1.59
Trim47Q8C0E3 Gm26054-201ENSMUST00000083037 107 ntBASIC5.13□□□□□ -1.59
Trim47Q8C0E3 Gm24492-201ENSMUST00000083798 107 ntBASIC5.13□□□□□ -1.59
Trim47Q8C0E3 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Trim47Q8C0E3 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC5.13□□□□□ -1.59
Trim47Q8C0E3 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
Trim47Q8C0E3 Gm37900-201ENSMUST00000195510 3805 ntBASIC5.13□□□□□ -1.59
Trim47Q8C0E3 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC5.13□□□□□ -1.59
Trim47Q8C0E3 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Trim47Q8C0E3 Gm19428-201ENSMUST00000220512 1995 ntBASIC5.13□□□□□ -1.59
Trim47Q8C0E3 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Trim47Q8C0E3 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Trim47Q8C0E3 Gm45324-201ENSMUST00000211193 5638 ntBASIC5.12□□□□□ -1.59
Trim47Q8C0E3 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Trim47Q8C0E3 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC5.12□□□□□ -1.59
Trim47Q8C0E3 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Trim47Q8C0E3 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Trim47Q8C0E3 Gm38125-201ENSMUST00000194136 3438 ntBASIC5.12□□□□□ -1.59
Trim47Q8C0E3 Gm43594-201ENSMUST00000201153 3442 ntBASIC5.12□□□□□ -1.59
Trim47Q8C0E3 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Trim47Q8C0E3 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC5.12□□□□□ -1.59
Trim47Q8C0E3 Gm42659-201ENSMUST00000196955 1754 ntBASIC5.12□□□□□ -1.59
Trim47Q8C0E3 AC152981.1-201ENSMUST00000218320 2480 ntBASIC5.12□□□□□ -1.59
Trim47Q8C0E3 AC154227.1-201ENSMUST00000228809 2467 ntBASIC5.12□□□□□ -1.59
Trim47Q8C0E3 Gm38265-201ENSMUST00000193479 3766 ntBASIC5.12□□□□□ -1.59
Trim47Q8C0E3 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Trim47Q8C0E3 Gm22473-201ENSMUST00000104114 132 ntBASIC5.12□□□□□ -1.59
Trim47Q8C0E3 Gm24234-201ENSMUST00000104316 107 ntBASIC5.12□□□□□ -1.59
Trim47Q8C0E3 n-R5s192-201ENSMUST00000122577 119 ntBASIC5.12□□□□□ -1.59
Trim47Q8C0E3 Gm17131-201ENSMUST00000164420 3846 ntBASIC5.12□□□□□ -1.59
Trim47Q8C0E3 Gm17186-201ENSMUST00000171742 456 ntBASIC5.12□□□□□ -1.59
Trim47Q8C0E3 Gm18520-201ENSMUST00000174783 658 ntBASIC5.12□□□□□ -1.59
Trim47Q8C0E3 Gm19427-201ENSMUST00000183619 208 ntBASIC5.12□□□□□ -1.59
Trim47Q8C0E3 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC5.12□□□□□ -1.59
Trim47Q8C0E3 Gm30341-201ENSMUST00000194363 289 ntBASIC5.12□□□□□ -1.59
Trim47Q8C0E3 Ighv1-32-201ENSMUST00000195149 351 ntBASIC5.12□□□□□ -1.59
Trim47Q8C0E3 Gm44010-201ENSMUST00000204432 331 ntBASIC5.12□□□□□ -1.59
Trim47Q8C0E3 Gm45778-201ENSMUST00000211959 153 ntBASIC5.12□□□□□ -1.59
Trim47Q8C0E3 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC5.12□□□□□ -1.59
Trim47Q8C0E3 Gm23517-201ENSMUST00000082830 192 ntBASIC5.12□□□□□ -1.59
Trim47Q8C0E3 Gm23039-201ENSMUST00000083870 161 ntBASIC5.12□□□□□ -1.59
Trim47Q8C0E3 CT025577.1-201ENSMUST00000220862 2846 ntBASIC5.12□□□□□ -1.59
Trim47Q8C0E3 Gm44439-201ENSMUST00000203379 3592 ntBASIC5.12□□□□□ -1.59
Trim47Q8C0E3 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Trim47Q8C0E3 Gm38253-201ENSMUST00000194058 4678 ntBASIC5.12□□□□□ -1.59
Trim47Q8C0E3 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Trim47Q8C0E3 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Trim47Q8C0E3 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Trim47Q8C0E3 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Trim47Q8C0E3 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Trim47Q8C0E3 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC5.11□□□□□ -1.59
Trim47Q8C0E3 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC5.11□□□□□ -1.59
Trim47Q8C0E3 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Trim47Q8C0E3 Gm23577-201ENSMUST00000103950 110 ntBASIC5.11□□□□□ -1.59
Trim47Q8C0E3 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Trim47Q8C0E3 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Trim47Q8C0E3 Gm11645-201ENSMUST00000121589 649 ntBASIC5.11□□□□□ -1.59
Trim47Q8C0E3 Gm4916-201ENSMUST00000126139 642 ntBASIC5.11□□□□□ -1.59
Trim47Q8C0E3 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Trim47Q8C0E3 Gm23023-201ENSMUST00000158767 109 ntBASIC5.11□□□□□ -1.59
Trim47Q8C0E3 Gm3851-201ENSMUST00000168653 318 ntBASIC5.11□□□□□ -1.59
Trim47Q8C0E3 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC5.11□□□□□ -1.59
Trim47Q8C0E3 Gm24520-201ENSMUST00000179510 110 ntBASIC5.11□□□□□ -1.59
Trim47Q8C0E3 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC5.11□□□□□ -1.59
Trim47Q8C0E3 Gm27564-201ENSMUST00000185196 96 ntBASIC5.11□□□□□ -1.59
Trim47Q8C0E3 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC5.11□□□□□ -1.59
Trim47Q8C0E3 Gm7182-201ENSMUST00000193351 732 ntBASIC5.11□□□□□ -1.59
Trim47Q8C0E3 Gm37601-201ENSMUST00000194922 394 ntBASIC5.11□□□□□ -1.59
Trim47Q8C0E3 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC5.11□□□□□ -1.59
Trim47Q8C0E3 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Trim47Q8C0E3 Gm45651-201ENSMUST00000210857 335 ntBASIC5.11□□□□□ -1.59
Trim47Q8C0E3 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC5.11□□□□□ -1.59
Trim47Q8C0E3 AC173345.2-201ENSMUST00000222795 153 ntBASIC5.11□□□□□ -1.59
Trim47Q8C0E3 CT009713.4-201ENSMUST00000224246 272 ntBASIC5.11□□□□□ -1.59
Trim47Q8C0E3 AC183092.1-201ENSMUST00000224301 153 ntBASIC5.11□□□□□ -1.59
Trim47Q8C0E3 AC154618.1-201ENSMUST00000227451 303 ntBASIC5.11□□□□□ -1.59
Trim47Q8C0E3 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Trim47Q8C0E3 Gm6162-201ENSMUST00000194870 2930 ntBASIC5.11□□□□□ -1.59
Trim47Q8C0E3 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Trim47Q8C0E3 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Trim47Q8C0E3 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Trim47Q8C0E3 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Trim47Q8C0E3 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC5.11□□□□□ -1.59
Trim47Q8C0E3 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Trim47Q8C0E3 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Trim47Q8C0E3 Gm43011-201ENSMUST00000197897 4433 ntBASIC5.1□□□□□ -1.59
Trim47Q8C0E3 Gm12190-201ENSMUST00000120001 187 ntBASIC5.1□□□□□ -1.59
Trim47Q8C0E3 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC5.1□□□□□ -1.59
Trim47Q8C0E3 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Trim47Q8C0E3 Gm6265-201ENSMUST00000149263 231 ntBASIC5.1□□□□□ -1.59
Trim47Q8C0E3 Gm23466-201ENSMUST00000157133 106 ntBASIC5.1□□□□□ -1.59
Trim47Q8C0E3 Gm23781-201ENSMUST00000157940 308 ntBASIC5.1□□□□□ -1.59
Trim47Q8C0E3 Gm7582-201ENSMUST00000160831 603 ntBASIC5.1□□□□□ -1.59
Trim47Q8C0E3 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC5.1□□□□□ -1.59
Trim47Q8C0E3 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms