Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC3.56□□□□□ -1.84
Ubfd1Q78JW9 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Ubfd1Q78JW9 Igkv13-64-201ENSMUST00000198143 343 ntBASIC3.56□□□□□ -1.84
Ubfd1Q78JW9 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Ubfd1Q78JW9 Gm43039-201ENSMUST00000202883 963 ntBASIC3.56□□□□□ -1.84
Ubfd1Q78JW9 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC3.56□□□□□ -1.84
Ubfd1Q78JW9 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC3.56□□□□□ -1.84
Ubfd1Q78JW9 AC154296.2-201ENSMUST00000214696 545 ntBASIC3.56□□□□□ -1.84
Ubfd1Q78JW9 AC140785.1-201ENSMUST00000217782 383 ntBASIC3.56□□□□□ -1.84
Ubfd1Q78JW9 AC160031.2-201ENSMUST00000218242 274 ntBASIC3.56□□□□□ -1.84
Ubfd1Q78JW9 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.56□□□□□ -1.84
Ubfd1Q78JW9 AC091783.5-201ENSMUST00000224928 671 ntBASIC3.56□□□□□ -1.84
Ubfd1Q78JW9 AC122393.3-201ENSMUST00000226343 1059 ntBASIC3.56□□□□□ -1.84
Ubfd1Q78JW9 Gm25800-201ENSMUST00000082636 134 ntBASIC3.56□□□□□ -1.84
Ubfd1Q78JW9 Gm24147-201ENSMUST00000082763 144 ntBASIC3.56□□□□□ -1.84
Ubfd1Q78JW9 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Ubfd1Q78JW9 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
Ubfd1Q78JW9 Gm42870-201ENSMUST00000199355 3470 ntBASIC3.56□□□□□ -1.84
Ubfd1Q78JW9 Gm36969-201ENSMUST00000194551 2809 ntBASIC3.56□□□□□ -1.84
Ubfd1Q78JW9 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
Ubfd1Q78JW9 Gm3683-201ENSMUST00000175701 2513 ntBASIC3.55□□□□□ -1.84
Ubfd1Q78JW9 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Ubfd1Q78JW9 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Ubfd1Q78JW9 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.55□□□□□ -1.84
Ubfd1Q78JW9 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
Ubfd1Q78JW9 Gm44821-201ENSMUST00000208212 2002 ntBASIC3.55□□□□□ -1.84
Ubfd1Q78JW9 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Ubfd1Q78JW9 Gm24403-201ENSMUST00000104616 130 ntBASIC3.55□□□□□ -1.84
Ubfd1Q78JW9 Gm13076-201ENSMUST00000118041 204 ntBASIC3.55□□□□□ -1.84
Ubfd1Q78JW9 Gm13419-201ENSMUST00000121711 271 ntBASIC3.55□□□□□ -1.84
Ubfd1Q78JW9 Gm13901-201ENSMUST00000137252 468 ntBASIC3.55□□□□□ -1.84
Ubfd1Q78JW9 Gm23602-201ENSMUST00000157258 132 ntBASIC3.55□□□□□ -1.84
Ubfd1Q78JW9 Gm23123-201ENSMUST00000157648 144 ntBASIC3.55□□□□□ -1.84
Ubfd1Q78JW9 Gm22098-201ENSMUST00000157930 85 ntBASIC3.55□□□□□ -1.84
Ubfd1Q78JW9 Mir1934-201ENSMUST00000158127 83 ntBASIC3.55□□□□□ -1.84
Ubfd1Q78JW9 Gm24727-201ENSMUST00000158231 144 ntBASIC3.55□□□□□ -1.84
Ubfd1Q78JW9 Gm25902-201ENSMUST00000158493 318 ntBASIC3.55□□□□□ -1.84
Ubfd1Q78JW9 Gm17148-201ENSMUST00000164702 249 ntBASIC3.55□□□□□ -1.84
Ubfd1Q78JW9 Gm20698-201ENSMUST00000175657 233 ntBASIC3.55□□□□□ -1.84
Ubfd1Q78JW9 Gm26430-201ENSMUST00000178054 107 ntBASIC3.55□□□□□ -1.84
Ubfd1Q78JW9 Gm23862-201ENSMUST00000180342 94 ntBASIC3.55□□□□□ -1.84
Ubfd1Q78JW9 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC3.55□□□□□ -1.84
Ubfd1Q78JW9 Gm38088-201ENSMUST00000195829 241 ntBASIC3.55□□□□□ -1.84
Ubfd1Q78JW9 Gm44041-201ENSMUST00000203678 396 ntBASIC3.55□□□□□ -1.84
Ubfd1Q78JW9 Gm44060-201ENSMUST00000204440 410 ntBASIC3.55□□□□□ -1.84
Ubfd1Q78JW9 Gm44657-201ENSMUST00000208568 450 ntBASIC3.55□□□□□ -1.84
Ubfd1Q78JW9 Gm45673-201ENSMUST00000210293 358 ntBASIC3.55□□□□□ -1.84
Ubfd1Q78JW9 Gm7240-201ENSMUST00000220769 664 ntBASIC3.55□□□□□ -1.84
Ubfd1Q78JW9 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.55□□□□□ -1.84
Ubfd1Q78JW9 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Ubfd1Q78JW9 Gm5265-201ENSMUST00000076828 342 ntBASIC3.55□□□□□ -1.84
Ubfd1Q78JW9 Gm22577-201ENSMUST00000083731 109 ntBASIC3.55□□□□□ -1.84
Ubfd1Q78JW9 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Ubfd1Q78JW9 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Ubfd1Q78JW9 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.55□□□□□ -1.84
Ubfd1Q78JW9 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Ubfd1Q78JW9 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
Ubfd1Q78JW9 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
Ubfd1Q78JW9 Gm14390-201ENSMUST00000117505 1695 ntBASIC3.55□□□□□ -1.84
Ubfd1Q78JW9 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Ubfd1Q78JW9 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC3.55□□□□□ -1.84
Ubfd1Q78JW9 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Ubfd1Q78JW9 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.55□□□□□ -1.84
Ubfd1Q78JW9 Gm37176-201ENSMUST00000193300 4051 ntBASIC3.54□□□□□ -1.84
Ubfd1Q78JW9 AC116557.1-201ENSMUST00000219494 1521 ntBASIC3.54□□□□□ -1.84
Ubfd1Q78JW9 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Ubfd1Q78JW9 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Ubfd1Q78JW9 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC3.54□□□□□ -1.84
Ubfd1Q78JW9 Gm25764-201ENSMUST00000104092 134 ntBASIC3.54□□□□□ -1.84
Ubfd1Q78JW9 Gm12255-201ENSMUST00000117184 284 ntBASIC3.54□□□□□ -1.84
Ubfd1Q78JW9 Gm9157-201ENSMUST00000117673 225 ntBASIC3.54□□□□□ -1.84
Ubfd1Q78JW9 Gm15142-201ENSMUST00000121013 856 ntBASIC3.54□□□□□ -1.84
Ubfd1Q78JW9 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC3.54□□□□□ -1.84
Ubfd1Q78JW9 Gm12276-201ENSMUST00000121709 301 ntBASIC3.54□□□□□ -1.84
Ubfd1Q78JW9 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC3.54□□□□□ -1.84
Ubfd1Q78JW9 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.54□□□□□ -1.84
Ubfd1Q78JW9 Gm22792-201ENSMUST00000157225 133 ntBASIC3.54□□□□□ -1.84
Ubfd1Q78JW9 Gm23231-201ENSMUST00000157299 104 ntBASIC3.54□□□□□ -1.84
Ubfd1Q78JW9 Gm23666-201ENSMUST00000158053 116 ntBASIC3.54□□□□□ -1.84
Ubfd1Q78JW9 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC3.54□□□□□ -1.84
Ubfd1Q78JW9 Gm23053-201ENSMUST00000175136 96 ntBASIC3.54□□□□□ -1.84
Ubfd1Q78JW9 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Ubfd1Q78JW9 Gm24264-201ENSMUST00000179835 94 ntBASIC3.54□□□□□ -1.84
Ubfd1Q78JW9 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.54□□□□□ -1.84
Ubfd1Q78JW9 Gm28860-201ENSMUST00000188103 313 ntBASIC3.54□□□□□ -1.84
Ubfd1Q78JW9 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Ubfd1Q78JW9 Gm37029-201ENSMUST00000195773 239 ntBASIC3.54□□□□□ -1.84
Ubfd1Q78JW9 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC3.54□□□□□ -1.84
Ubfd1Q78JW9 Gm2189-201ENSMUST00000201419 429 ntBASIC3.54□□□□□ -1.84
Ubfd1Q78JW9 Gm44703-201ENSMUST00000205724 248 ntBASIC3.54□□□□□ -1.84
Ubfd1Q78JW9 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC3.54□□□□□ -1.84
Ubfd1Q78JW9 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC3.54□□□□□ -1.84
Ubfd1Q78JW9 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC3.54□□□□□ -1.84
Ubfd1Q78JW9 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.54□□□□□ -1.84
Ubfd1Q78JW9 AC158395.1-201ENSMUST00000227206 452 ntBASIC3.54□□□□□ -1.84
Ubfd1Q78JW9 Olfr575-201ENSMUST00000084812 957 ntBASIC3.54□□□□□ -1.84
Ubfd1Q78JW9 Gm22365-201ENSMUST00000093750 117 ntBASIC3.54□□□□□ -1.84
Ubfd1Q78JW9 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Ubfd1Q78JW9 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Ubfd1Q78JW9 Gm38207-201ENSMUST00000193009 3505 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms