Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Sh3rf1Q69ZI1 Gm45131-201ENSMUST00000208051 2582 ntBASIC4.49□□□□□ -1.69
Sh3rf1Q69ZI1 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Sh3rf1Q69ZI1 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Sh3rf1Q69ZI1 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC4.49□□□□□ -1.69
Sh3rf1Q69ZI1 Gm37387-201ENSMUST00000192201 1806 ntBASIC4.49□□□□□ -1.69
Sh3rf1Q69ZI1 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC4.48□□□□□ -1.69
Sh3rf1Q69ZI1 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Sh3rf1Q69ZI1 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Sh3rf1Q69ZI1 Gm38260-201ENSMUST00000193573 3995 ntBASIC4.48□□□□□ -1.69
Sh3rf1Q69ZI1 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Sh3rf1Q69ZI1 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Sh3rf1Q69ZI1 Gm43923-201ENSMUST00000203992 2911 ntBASIC4.48□□□□□ -1.69
Sh3rf1Q69ZI1 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Sh3rf1Q69ZI1 Gm4855-201ENSMUST00000192270 1967 ntBASIC4.48□□□□□ -1.69
Sh3rf1Q69ZI1 AC124561.2-201ENSMUST00000226657 1973 ntBASIC4.48□□□□□ -1.69
Sh3rf1Q69ZI1 Gm24423-201ENSMUST00000101982 106 ntBASIC4.48□□□□□ -1.69
Sh3rf1Q69ZI1 Gm15058-201ENSMUST00000117689 458 ntBASIC4.48□□□□□ -1.69
Sh3rf1Q69ZI1 Gm15002-201ENSMUST00000118406 452 ntBASIC4.48□□□□□ -1.69
Sh3rf1Q69ZI1 Gm22789-201ENSMUST00000157884 130 ntBASIC4.48□□□□□ -1.69
Sh3rf1Q69ZI1 Gm22328-201ENSMUST00000158074 112 ntBASIC4.48□□□□□ -1.69
Sh3rf1Q69ZI1 Gm27510-201ENSMUST00000158214 64 ntBASIC4.48□□□□□ -1.69
Sh3rf1Q69ZI1 Gm23312-201ENSMUST00000158774 102 ntBASIC4.48□□□□□ -1.69
Sh3rf1Q69ZI1 Gm23474-201ENSMUST00000158884 75 ntBASIC4.48□□□□□ -1.69
Sh3rf1Q69ZI1 Gm3851-201ENSMUST00000168653 318 ntBASIC4.48□□□□□ -1.69
Sh3rf1Q69ZI1 Gm28830-201ENSMUST00000188192 213 ntBASIC4.48□□□□□ -1.69
Sh3rf1Q69ZI1 Gm38080-201ENSMUST00000194035 268 ntBASIC4.48□□□□□ -1.69
Sh3rf1Q69ZI1 Gm37601-201ENSMUST00000194922 394 ntBASIC4.48□□□□□ -1.69
Sh3rf1Q69ZI1 Mir7661-201ENSMUST00000197023 61 ntBASIC4.48□□□□□ -1.69
Sh3rf1Q69ZI1 Gm42453-201ENSMUST00000200477 409 ntBASIC4.48□□□□□ -1.69
Sh3rf1Q69ZI1 Gm34091-201ENSMUST00000200875 604 ntBASIC4.48□□□□□ -1.69
Sh3rf1Q69ZI1 Gm43600-201ENSMUST00000202134 223 ntBASIC4.48□□□□□ -1.69
Sh3rf1Q69ZI1 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC4.48□□□□□ -1.69
Sh3rf1Q69ZI1 Gm45101-201ENSMUST00000208327 232 ntBASIC4.48□□□□□ -1.69
Sh3rf1Q69ZI1 n-R5s152-201ENSMUST00000093641 119 ntBASIC4.48□□□□□ -1.69
Sh3rf1Q69ZI1 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Sh3rf1Q69ZI1 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Sh3rf1Q69ZI1 Gm38057-201ENSMUST00000195551 3203 ntBASIC4.48□□□□□ -1.69
Sh3rf1Q69ZI1 Gm28634-201ENSMUST00000191087 2613 ntBASIC4.48□□□□□ -1.69
Sh3rf1Q69ZI1 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Sh3rf1Q69ZI1 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Sh3rf1Q69ZI1 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
Sh3rf1Q69ZI1 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Sh3rf1Q69ZI1 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Sh3rf1Q69ZI1 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Sh3rf1Q69ZI1 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Sh3rf1Q69ZI1 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Sh3rf1Q69ZI1 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Sh3rf1Q69ZI1 Gm43834-201ENSMUST00000197097 4830 ntBASIC4.47□□□□□ -1.69
Sh3rf1Q69ZI1 Gm3972-201ENSMUST00000173960 2861 ntBASIC4.47□□□□□ -1.69
Sh3rf1Q69ZI1 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
Sh3rf1Q69ZI1 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Sh3rf1Q69ZI1 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Sh3rf1Q69ZI1 Gm25726-201ENSMUST00000104529 129 ntBASIC4.47□□□□□ -1.69
Sh3rf1Q69ZI1 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC4.47□□□□□ -1.69
Sh3rf1Q69ZI1 Gm14657-201ENSMUST00000117461 302 ntBASIC4.47□□□□□ -1.69
Sh3rf1Q69ZI1 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC4.47□□□□□ -1.69
Sh3rf1Q69ZI1 Gm26186-201ENSMUST00000157689 125 ntBASIC4.47□□□□□ -1.69
Sh3rf1Q69ZI1 Gm2962-201ENSMUST00000159266 336 ntBASIC4.47□□□□□ -1.69
Sh3rf1Q69ZI1 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Sh3rf1Q69ZI1 Gm15796-201ENSMUST00000162135 204 ntBASIC4.47□□□□□ -1.69
Sh3rf1Q69ZI1 Gm21893-201ENSMUST00000179119 397 ntBASIC4.47□□□□□ -1.69
Sh3rf1Q69ZI1 Gm27834-201ENSMUST00000183427 125 ntBASIC4.47□□□□□ -1.69
Sh3rf1Q69ZI1 Gm29330-201ENSMUST00000190032 699 ntBASIC4.47□□□□□ -1.69
Sh3rf1Q69ZI1 Gm37624-201ENSMUST00000193751 219 ntBASIC4.47□□□□□ -1.69
Sh3rf1Q69ZI1 Gm43284-201ENSMUST00000200103 253 ntBASIC4.47□□□□□ -1.69
Sh3rf1Q69ZI1 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC4.47□□□□□ -1.69
Sh3rf1Q69ZI1 Gm43028-201ENSMUST00000202561 481 ntBASIC4.47□□□□□ -1.69
Sh3rf1Q69ZI1 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Sh3rf1Q69ZI1 Mecom-201ENSMUST00000061088 348 ntBASIC4.47□□□□□ -1.69
Sh3rf1Q69ZI1 Snord22-201ENSMUST00000083153 126 ntBASIC4.47□□□□□ -1.69
Sh3rf1Q69ZI1 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
Sh3rf1Q69ZI1 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC4.47□□□□□ -1.69
Sh3rf1Q69ZI1 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Sh3rf1Q69ZI1 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC4.47□□□□□ -1.69
Sh3rf1Q69ZI1 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
Sh3rf1Q69ZI1 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Sh3rf1Q69ZI1 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
Sh3rf1Q69ZI1 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
Sh3rf1Q69ZI1 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
Sh3rf1Q69ZI1 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.69
Sh3rf1Q69ZI1 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
Sh3rf1Q69ZI1 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Sh3rf1Q69ZI1 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC4.46□□□□□ -1.7
Sh3rf1Q69ZI1 Gm26147-201ENSMUST00000104479 114 ntBASIC4.46□□□□□ -1.7
Sh3rf1Q69ZI1 Gm22493-201ENSMUST00000104494 132 ntBASIC4.46□□□□□ -1.7
Sh3rf1Q69ZI1 Gm16242-201ENSMUST00000117741 334 ntBASIC4.46□□□□□ -1.7
Sh3rf1Q69ZI1 Gm12571-201ENSMUST00000118132 243 ntBASIC4.46□□□□□ -1.7
Sh3rf1Q69ZI1 Gm15162-201ENSMUST00000119325 283 ntBASIC4.46□□□□□ -1.7
Sh3rf1Q69ZI1 Gm12190-201ENSMUST00000120001 187 ntBASIC4.46□□□□□ -1.7
Sh3rf1Q69ZI1 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC4.46□□□□□ -1.7
Sh3rf1Q69ZI1 Gm25071-201ENSMUST00000175232 70 ntBASIC4.46□□□□□ -1.7
Sh3rf1Q69ZI1 Gm22395-201ENSMUST00000177427 96 ntBASIC4.46□□□□□ -1.7
Sh3rf1Q69ZI1 Gm19123-201ENSMUST00000190716 651 ntBASIC4.46□□□□□ -1.7
Sh3rf1Q69ZI1 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC4.46□□□□□ -1.7
Sh3rf1Q69ZI1 Gm43586-201ENSMUST00000195948 310 ntBASIC4.46□□□□□ -1.7
Sh3rf1Q69ZI1 Gm44881-201ENSMUST00000205425 367 ntBASIC4.46□□□□□ -1.7
Sh3rf1Q69ZI1 Gm44533-201ENSMUST00000207782 268 ntBASIC4.46□□□□□ -1.7
Sh3rf1Q69ZI1 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC4.46□□□□□ -1.7
Sh3rf1Q69ZI1 AC154994.1-201ENSMUST00000217395 302 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 103.7 ms