Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Snord72-201ENSMUST00000104549 81 ntBASIC4.48□□□□□ -1.69
Trim28Q62318 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Trim28Q62318 Gm8649-201ENSMUST00000181799 233 ntBASIC4.48□□□□□ -1.69
Trim28Q62318 Gm7656-201ENSMUST00000182468 1004 ntBASIC4.48□□□□□ -1.69
Trim28Q62318 Gm27374-201ENSMUST00000183660 81 ntBASIC4.48□□□□□ -1.69
Trim28Q62318 Gm27660-201ENSMUST00000184028 208 ntBASIC4.48□□□□□ -1.69
Trim28Q62318 Mir6413-201ENSMUST00000184049 108 ntBASIC4.48□□□□□ -1.69
Trim28Q62318 Gm28785-201ENSMUST00000187478 379 ntBASIC4.48□□□□□ -1.69
Trim28Q62318 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC4.48□□□□□ -1.69
Trim28Q62318 Gm29524-201ENSMUST00000190819 699 ntBASIC4.48□□□□□ -1.69
Trim28Q62318 Igkv11-118-201ENSMUST00000199448 346 ntBASIC4.48□□□□□ -1.69
Trim28Q62318 Gm44858-201ENSMUST00000207360 154 ntBASIC4.48□□□□□ -1.69
Trim28Q62318 Gm9712-201ENSMUST00000210842 311 ntBASIC4.48□□□□□ -1.69
Trim28Q62318 Gm8423-201ENSMUST00000211387 607 ntBASIC4.48□□□□□ -1.69
Trim28Q62318 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Trim28Q62318 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
Trim28Q62318 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC4.48□□□□□ -1.69
Trim28Q62318 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
Trim28Q62318 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
Trim28Q62318 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Trim28Q62318 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Trim28Q62318 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
Trim28Q62318 AC167250.1-201ENSMUST00000213739 3813 ntBASIC4.47□□□□□ -1.69
Trim28Q62318 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Trim28Q62318 Gm37672-201ENSMUST00000192682 4014 ntBASIC4.47□□□□□ -1.69
Trim28Q62318 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Trim28Q62318 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Trim28Q62318 Gm14125-201ENSMUST00000113442 680 ntBASIC4.47□□□□□ -1.69
Trim28Q62318 Gm24831-201ENSMUST00000116778 126 ntBASIC4.47□□□□□ -1.69
Trim28Q62318 Gm14622-201ENSMUST00000117117 468 ntBASIC4.47□□□□□ -1.69
Trim28Q62318 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC4.47□□□□□ -1.69
Trim28Q62318 Gm14731-201ENSMUST00000119216 376 ntBASIC4.47□□□□□ -1.69
Trim28Q62318 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
Trim28Q62318 Gm22960-201ENSMUST00000122517 104 ntBASIC4.47□□□□□ -1.69
Trim28Q62318 Gm22988-201ENSMUST00000122759 144 ntBASIC4.47□□□□□ -1.69
Trim28Q62318 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
Trim28Q62318 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC4.47□□□□□ -1.69
Trim28Q62318 Gm23671-201ENSMUST00000157472 103 ntBASIC4.47□□□□□ -1.69
Trim28Q62318 Gm25706-201ENSMUST00000157828 247 ntBASIC4.47□□□□□ -1.69
Trim28Q62318 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC4.47□□□□□ -1.69
Trim28Q62318 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC4.47□□□□□ -1.69
Trim28Q62318 Gm37746-201ENSMUST00000193249 198 ntBASIC4.47□□□□□ -1.69
Trim28Q62318 Gm43083-201ENSMUST00000199594 476 ntBASIC4.47□□□□□ -1.69
Trim28Q62318 Gm44092-201ENSMUST00000204470 258 ntBASIC4.47□□□□□ -1.69
Trim28Q62318 Gm7407-201ENSMUST00000208301 568 ntBASIC4.47□□□□□ -1.69
Trim28Q62318 Gm45590-201ENSMUST00000209715 262 ntBASIC4.47□□□□□ -1.69
Trim28Q62318 Gm35405-201ENSMUST00000218754 400 ntBASIC4.47□□□□□ -1.69
Trim28Q62318 AC121966.1-201ENSMUST00000221458 282 ntBASIC4.47□□□□□ -1.69
Trim28Q62318 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC4.47□□□□□ -1.69
Trim28Q62318 AC154576.2-202ENSMUST00000223916 688 ntBASIC4.47□□□□□ -1.69
Trim28Q62318 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Trim28Q62318 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Trim28Q62318 Gm25853-201ENSMUST00000082793 132 ntBASIC4.47□□□□□ -1.69
Trim28Q62318 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Trim28Q62318 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Trim28Q62318 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Trim28Q62318 Gm24338-201ENSMUST00000104205 127 ntBASIC4.46□□□□□ -1.7
Trim28Q62318 Gm11268-201ENSMUST00000118347 267 ntBASIC4.46□□□□□ -1.7
Trim28Q62318 Gm14591-201ENSMUST00000120407 518 ntBASIC4.46□□□□□ -1.7
Trim28Q62318 Gm11388-201ENSMUST00000120908 159 ntBASIC4.46□□□□□ -1.7
Trim28Q62318 Gm25784-201ENSMUST00000122524 81 ntBASIC4.46□□□□□ -1.7
Trim28Q62318 Gm24836-201ENSMUST00000122609 108 ntBASIC4.46□□□□□ -1.7
Trim28Q62318 Gm2020-201ENSMUST00000145242 579 ntBASIC4.46□□□□□ -1.7
Trim28Q62318 Gm23960-201ENSMUST00000157206 131 ntBASIC4.46□□□□□ -1.7
Trim28Q62318 Gm22378-201ENSMUST00000157481 111 ntBASIC4.46□□□□□ -1.7
Trim28Q62318 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Trim28Q62318 Gm25671-201ENSMUST00000178612 105 ntBASIC4.46□□□□□ -1.7
Trim28Q62318 Gm23307-201ENSMUST00000179167 105 ntBASIC4.46□□□□□ -1.7
Trim28Q62318 Gm23793-201ENSMUST00000179396 117 ntBASIC4.46□□□□□ -1.7
Trim28Q62318 Gm25286-201ENSMUST00000179790 105 ntBASIC4.46□□□□□ -1.7
Trim28Q62318 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC4.46□□□□□ -1.7
Trim28Q62318 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC4.46□□□□□ -1.7
Trim28Q62318 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC4.46□□□□□ -1.7
Trim28Q62318 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC4.46□□□□□ -1.7
Trim28Q62318 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC4.46□□□□□ -1.7
Trim28Q62318 Gm28098-201ENSMUST00000191361 699 ntBASIC4.46□□□□□ -1.7
Trim28Q62318 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC4.46□□□□□ -1.7
Trim28Q62318 Gm45049-201ENSMUST00000207586 591 ntBASIC4.46□□□□□ -1.7
Trim28Q62318 Gm45614-201ENSMUST00000209994 721 ntBASIC4.46□□□□□ -1.7
Trim28Q62318 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
Trim28Q62318 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC4.46□□□□□ -1.7
Trim28Q62318 Gm2446-201ENSMUST00000220144 772 ntBASIC4.46□□□□□ -1.7
Trim28Q62318 AC166341.3-201ENSMUST00000221861 114 ntBASIC4.46□□□□□ -1.7
Trim28Q62318 AC165092.3-201ENSMUST00000223602 282 ntBASIC4.46□□□□□ -1.7
Trim28Q62318 AC090496.1-201ENSMUST00000226020 260 ntBASIC4.46□□□□□ -1.7
Trim28Q62318 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Trim28Q62318 Gm26206-201ENSMUST00000082908 110 ntBASIC4.46□□□□□ -1.7
Trim28Q62318 Snord38a-201ENSMUST00000083746 71 ntBASIC4.46□□□□□ -1.7
Trim28Q62318 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Trim28Q62318 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC4.46□□□□□ -1.7
Trim28Q62318 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
Trim28Q62318 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC4.46□□□□□ -1.7
Trim28Q62318 Gm37802-201ENSMUST00000194998 2643 ntBASIC4.46□□□□□ -1.7
Trim28Q62318 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Trim28Q62318 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Trim28Q62318 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Trim28Q62318 Gm37887-201ENSMUST00000192752 2716 ntBASIC4.45□□□□□ -1.7
Trim28Q62318 Gm17752-201ENSMUST00000185787 3726 ntBASIC4.45□□□□□ -1.7
Trim28Q62318 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Trim28Q62318 Gm38286-201ENSMUST00000195128 3105 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 129 ms