Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm13510-201ENSMUST00000118659 429 ntBASIC2□□□□□ -2.09
Trav3-3Q5R1C3 Gm12458-201ENSMUST00000119387 495 ntBASIC2□□□□□ -2.09
Trav3-3Q5R1C3 Gm11785-201ENSMUST00000120165 601 ntBASIC2□□□□□ -2.09
Trav3-3Q5R1C3 Gm12825-201ENSMUST00000120249 563 ntBASIC2□□□□□ -2.09
Trav3-3Q5R1C3 Gm9225-201ENSMUST00000121921 836 ntBASIC2□□□□□ -2.09
Trav3-3Q5R1C3 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC2□□□□□ -2.09
Trav3-3Q5R1C3 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC2□□□□□ -2.09
Trav3-3Q5R1C3 Gm2830-201ENSMUST00000140330 385 ntBASIC2□□□□□ -2.09
Trav3-3Q5R1C3 Mir5112-201ENSMUST00000174897 60 ntBASIC2□□□□□ -2.09
Trav3-3Q5R1C3 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC2□□□□□ -2.09
Trav3-3Q5R1C3 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC2□□□□□ -2.09
Trav3-3Q5R1C3 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC2□□□□□ -2.09
Trav3-3Q5R1C3 Gm29747-201ENSMUST00000194764 585 ntBASIC2□□□□□ -2.09
Trav3-3Q5R1C3 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC2□□□□□ -2.09
Trav3-3Q5R1C3 Igkv1-115-201ENSMUST00000198714 302 ntBASIC2□□□□□ -2.09
Trav3-3Q5R1C3 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC2□□□□□ -2.09
Trav3-3Q5R1C3 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC2□□□□□ -2.09
Trav3-3Q5R1C3 AL929285.1-201ENSMUST00000215522 229 ntBASIC2□□□□□ -2.09
Trav3-3Q5R1C3 Gm18346-201ENSMUST00000216782 325 ntBASIC2□□□□□ -2.09
Trav3-3Q5R1C3 Gm46994-201ENSMUST00000221523 219 ntBASIC2□□□□□ -2.09
Trav3-3Q5R1C3 Gm5955-201ENSMUST00000222712 219 ntBASIC2□□□□□ -2.09
Trav3-3Q5R1C3 AC156574.2-201ENSMUST00000228023 282 ntBASIC2□□□□□ -2.09
Trav3-3Q5R1C3 n-R5s197-201ENSMUST00000083302 119 ntBASIC2□□□□□ -2.09
Trav3-3Q5R1C3 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2□□□□□ -2.09
Trav3-3Q5R1C3 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
Trav3-3Q5R1C3 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
Trav3-3Q5R1C3 Gm45178-201ENSMUST00000207744 4110 ntBASIC1.99□□□□□ -2.09
Trav3-3Q5R1C3 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Trav3-3Q5R1C3 Gm15314-201ENSMUST00000120740 1887 ntBASIC1.99□□□□□ -2.09
Trav3-3Q5R1C3 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Trav3-3Q5R1C3 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Trav3-3Q5R1C3 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC1.99□□□□□ -2.09
Trav3-3Q5R1C3 Gm45257-201ENSMUST00000210301 3998 ntBASIC1.99□□□□□ -2.09
Trav3-3Q5R1C3 Gm44625-201ENSMUST00000207838 1561 ntBASIC1.99□□□□□ -2.09
Trav3-3Q5R1C3 Gm26154-201ENSMUST00000102339 96 ntBASIC1.99□□□□□ -2.09
Trav3-3Q5R1C3 Gm12156-201ENSMUST00000119188 554 ntBASIC1.99□□□□□ -2.09
Trav3-3Q5R1C3 Gm14352-201ENSMUST00000119250 449 ntBASIC1.99□□□□□ -2.09
Trav3-3Q5R1C3 Gm15029-201ENSMUST00000119742 199 ntBASIC1.99□□□□□ -2.09
Trav3-3Q5R1C3 Gm14588-201ENSMUST00000119895 172 ntBASIC1.99□□□□□ -2.09
Trav3-3Q5R1C3 Gm25292-201ENSMUST00000122797 322 ntBASIC1.99□□□□□ -2.09
Trav3-3Q5R1C3 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC1.99□□□□□ -2.09
Trav3-3Q5R1C3 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC1.99□□□□□ -2.09
Trav3-3Q5R1C3 Gm24505-201ENSMUST00000157682 126 ntBASIC1.99□□□□□ -2.09
Trav3-3Q5R1C3 Gm8580-201ENSMUST00000160295 464 ntBASIC1.99□□□□□ -2.09
Trav3-3Q5R1C3 Gm6264-202ENSMUST00000162896 1217 ntBASIC1.99□□□□□ -2.09
Trav3-3Q5R1C3 Gm17538-201ENSMUST00000168236 327 ntBASIC1.99□□□□□ -2.09
Trav3-3Q5R1C3 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC1.99□□□□□ -2.09
Trav3-3Q5R1C3 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC1.99□□□□□ -2.09
Trav3-3Q5R1C3 Gm19224-201ENSMUST00000190477 793 ntBASIC1.99□□□□□ -2.09
Trav3-3Q5R1C3 Gm37743-201ENSMUST00000194645 376 ntBASIC1.99□□□□□ -2.09
Trav3-3Q5R1C3 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC1.99□□□□□ -2.09
Trav3-3Q5R1C3 Igkv1-108-201ENSMUST00000198926 298 ntBASIC1.99□□□□□ -2.09
Trav3-3Q5R1C3 Gm44125-201ENSMUST00000203068 448 ntBASIC1.99□□□□□ -2.09
Trav3-3Q5R1C3 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC1.99□□□□□ -2.09
Trav3-3Q5R1C3 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC1.99□□□□□ -2.09
Trav3-3Q5R1C3 AC164629.1-201ENSMUST00000220250 1113 ntBASIC1.99□□□□□ -2.09
Trav3-3Q5R1C3 Gm7984-201ENSMUST00000060640 538 ntBASIC1.99□□□□□ -2.09
Trav3-3Q5R1C3 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Trav3-3Q5R1C3 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Trav3-3Q5R1C3 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Trav3-3Q5R1C3 Gm25796-201ENSMUST00000082645 163 ntBASIC1.99□□□□□ -2.09
Trav3-3Q5R1C3 Gm24948-201ENSMUST00000082866 207 ntBASIC1.99□□□□□ -2.09
Trav3-3Q5R1C3 Mir465-201ENSMUST00000093563 74 ntBASIC1.99□□□□□ -2.09
Trav3-3Q5R1C3 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
Trav3-3Q5R1C3 Gm18751-201ENSMUST00000185777 2013 ntBASIC1.98□□□□□ -2.09
Trav3-3Q5R1C3 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Trav3-3Q5R1C3 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Trav3-3Q5R1C3 Gm22939-201ENSMUST00000103958 131 ntBASIC1.98□□□□□ -2.09
Trav3-3Q5R1C3 Gm13504-201ENSMUST00000117490 316 ntBASIC1.98□□□□□ -2.09
Trav3-3Q5R1C3 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
Trav3-3Q5R1C3 Gm22849-201ENSMUST00000157713 307 ntBASIC1.98□□□□□ -2.09
Trav3-3Q5R1C3 Gm17064-201ENSMUST00000167690 452 ntBASIC1.98□□□□□ -2.09
Trav3-3Q5R1C3 Gm18520-201ENSMUST00000174783 658 ntBASIC1.98□□□□□ -2.09
Trav3-3Q5R1C3 Gm23933-201ENSMUST00000178405 79 ntBASIC1.98□□□□□ -2.09
Trav3-3Q5R1C3 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Trav3-3Q5R1C3 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC1.98□□□□□ -2.09
Trav3-3Q5R1C3 Gm28666-201ENSMUST00000186649 274 ntBASIC1.98□□□□□ -2.09
Trav3-3Q5R1C3 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC1.98□□□□□ -2.09
Trav3-3Q5R1C3 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC1.98□□□□□ -2.09
Trav3-3Q5R1C3 Gm6321-201ENSMUST00000194460 1090 ntBASIC1.98□□□□□ -2.09
Trav3-3Q5R1C3 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC1.98□□□□□ -2.09
Trav3-3Q5R1C3 Gm43626-201ENSMUST00000198575 162 ntBASIC1.98□□□□□ -2.09
Trav3-3Q5R1C3 Gm42665-201ENSMUST00000202100 586 ntBASIC1.98□□□□□ -2.09
Trav3-3Q5R1C3 Gm45860-201ENSMUST00000212700 334 ntBASIC1.98□□□□□ -2.09
Trav3-3Q5R1C3 AC158803.1-201ENSMUST00000219495 316 ntBASIC1.98□□□□□ -2.09
Trav3-3Q5R1C3 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC1.98□□□□□ -2.09
Trav3-3Q5R1C3 AC122465.2-201ENSMUST00000221774 354 ntBASIC1.98□□□□□ -2.09
Trav3-3Q5R1C3 AC174797.3-202ENSMUST00000224578 587 ntBASIC1.98□□□□□ -2.09
Trav3-3Q5R1C3 AC154252.1-201ENSMUST00000226041 473 ntBASIC1.98□□□□□ -2.09
Trav3-3Q5R1C3 AC107453.2-201ENSMUST00000227714 655 ntBASIC1.98□□□□□ -2.09
Trav3-3Q5R1C3 AC144628.1-201ENSMUST00000227943 466 ntBASIC1.98□□□□□ -2.09
Trav3-3Q5R1C3 AC125464.1-201ENSMUST00000228013 512 ntBASIC1.98□□□□□ -2.09
Trav3-3Q5R1C3 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Trav3-3Q5R1C3 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Trav3-3Q5R1C3 Gm22061-201ENSMUST00000082557 107 ntBASIC1.98□□□□□ -2.09
Trav3-3Q5R1C3 n-R5s196-201ENSMUST00000083136 117 ntBASIC1.98□□□□□ -2.09
Trav3-3Q5R1C3 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Trav3-3Q5R1C3 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
Trav3-3Q5R1C3 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Trav3-3Q5R1C3 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms