Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Trim40Q3UWA4 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC2.8□□□□□ -1.96
Trim40Q3UWA4 Gm23848-201ENSMUST00000083826 106 ntBASIC2.8□□□□□ -1.96
Trim40Q3UWA4 Gm10161-201ENSMUST00000091506 204 ntBASIC2.8□□□□□ -1.96
Trim40Q3UWA4 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC2.8□□□□□ -1.96
Trim40Q3UWA4 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Trim40Q3UWA4 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Trim40Q3UWA4 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Trim40Q3UWA4 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Trim40Q3UWA4 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Trim40Q3UWA4 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Trim40Q3UWA4 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Trim40Q3UWA4 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.79□□□□□ -1.96
Trim40Q3UWA4 Gm24581-201ENSMUST00000103962 133 ntBASIC2.79□□□□□ -1.96
Trim40Q3UWA4 n-R5s31-201ENSMUST00000104162 110 ntBASIC2.79□□□□□ -1.96
Trim40Q3UWA4 Gm8217-201ENSMUST00000119136 465 ntBASIC2.79□□□□□ -1.96
Trim40Q3UWA4 Gm14647-201ENSMUST00000119392 680 ntBASIC2.79□□□□□ -1.96
Trim40Q3UWA4 Gm5937-201ENSMUST00000119715 643 ntBASIC2.79□□□□□ -1.96
Trim40Q3UWA4 Gm14739-201ENSMUST00000120424 802 ntBASIC2.79□□□□□ -1.96
Trim40Q3UWA4 Gm14069-201ENSMUST00000120815 229 ntBASIC2.79□□□□□ -1.96
Trim40Q3UWA4 Gm14411-201ENSMUST00000121798 914 ntBASIC2.79□□□□□ -1.96
Trim40Q3UWA4 Gm15038-201ENSMUST00000122144 296 ntBASIC2.79□□□□□ -1.96
Trim40Q3UWA4 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC2.79□□□□□ -1.96
Trim40Q3UWA4 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC2.79□□□□□ -1.96
Trim40Q3UWA4 Gm17162-201ENSMUST00000168538 473 ntBASIC2.79□□□□□ -1.96
Trim40Q3UWA4 Gm17186-201ENSMUST00000171742 456 ntBASIC2.79□□□□□ -1.96
Trim40Q3UWA4 Gm21893-201ENSMUST00000179119 397 ntBASIC2.79□□□□□ -1.96
Trim40Q3UWA4 Gm21816-201ENSMUST00000179255 360 ntBASIC2.79□□□□□ -1.96
Trim40Q3UWA4 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC2.79□□□□□ -1.96
Trim40Q3UWA4 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Trim40Q3UWA4 Gm28650-201ENSMUST00000188413 411 ntBASIC2.79□□□□□ -1.96
Trim40Q3UWA4 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
Trim40Q3UWA4 Ighv1-40-201ENSMUST00000194231 345 ntBASIC2.79□□□□□ -1.96
Trim40Q3UWA4 Gm19089-201ENSMUST00000197207 613 ntBASIC2.79□□□□□ -1.96
Trim40Q3UWA4 Gm44923-201ENSMUST00000206673 85 ntBASIC2.79□□□□□ -1.96
Trim40Q3UWA4 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC2.79□□□□□ -1.96
Trim40Q3UWA4 AC140785.1-201ENSMUST00000217782 383 ntBASIC2.79□□□□□ -1.96
Trim40Q3UWA4 Gm4921-201ENSMUST00000219804 992 ntBASIC2.79□□□□□ -1.96
Trim40Q3UWA4 AC122341.1-201ENSMUST00000227291 560 ntBASIC2.79□□□□□ -1.96
Trim40Q3UWA4 AC139350.4-201ENSMUST00000228483 798 ntBASIC2.79□□□□□ -1.96
Trim40Q3UWA4 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Trim40Q3UWA4 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Trim40Q3UWA4 Snora7a-201ENSMUST00000082629 140 ntBASIC2.79□□□□□ -1.96
Trim40Q3UWA4 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Trim40Q3UWA4 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
Trim40Q3UWA4 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Trim40Q3UWA4 Gm25507-201ENSMUST00000116981 144 ntBASIC2.78□□□□□ -1.96
Trim40Q3UWA4 Gm14657-201ENSMUST00000117461 302 ntBASIC2.78□□□□□ -1.96
Trim40Q3UWA4 Gm14293-201ENSMUST00000118528 577 ntBASIC2.78□□□□□ -1.96
Trim40Q3UWA4 Gm11456-201ENSMUST00000121070 256 ntBASIC2.78□□□□□ -1.96
Trim40Q3UWA4 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC2.78□□□□□ -1.96
Trim40Q3UWA4 Gm14766-201ENSMUST00000121689 367 ntBASIC2.78□□□□□ -1.96
Trim40Q3UWA4 Gm8840-201ENSMUST00000122454 386 ntBASIC2.78□□□□□ -1.96
Trim40Q3UWA4 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC2.78□□□□□ -1.96
Trim40Q3UWA4 Gm6265-201ENSMUST00000149263 231 ntBASIC2.78□□□□□ -1.96
Trim40Q3UWA4 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC2.78□□□□□ -1.96
Trim40Q3UWA4 Gm22849-201ENSMUST00000157713 307 ntBASIC2.78□□□□□ -1.96
Trim40Q3UWA4 Gm24998-201ENSMUST00000157908 89 ntBASIC2.78□□□□□ -1.96
Trim40Q3UWA4 Gm15946-201ENSMUST00000160654 423 ntBASIC2.78□□□□□ -1.96
Trim40Q3UWA4 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC2.78□□□□□ -1.96
Trim40Q3UWA4 Gm27028-201ENSMUST00000182303 399 ntBASIC2.78□□□□□ -1.96
Trim40Q3UWA4 Mir6383-201ENSMUST00000184545 116 ntBASIC2.78□□□□□ -1.96
Trim40Q3UWA4 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC2.78□□□□□ -1.96
Trim40Q3UWA4 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC2.78□□□□□ -1.96
Trim40Q3UWA4 Gm19147-201ENSMUST00000199622 652 ntBASIC2.78□□□□□ -1.96
Trim40Q3UWA4 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.78□□□□□ -1.96
Trim40Q3UWA4 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC2.78□□□□□ -1.96
Trim40Q3UWA4 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC2.78□□□□□ -1.96
Trim40Q3UWA4 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
Trim40Q3UWA4 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC2.78□□□□□ -1.96
Trim40Q3UWA4 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC2.78□□□□□ -1.96
Trim40Q3UWA4 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Trim40Q3UWA4 CT030705.1-201ENSMUST00000223971 533 ntBASIC2.78□□□□□ -1.96
Trim40Q3UWA4 AC157654.1-201ENSMUST00000224130 820 ntBASIC2.78□□□□□ -1.96
Trim40Q3UWA4 AC110380.1-201ENSMUST00000226987 389 ntBASIC2.78□□□□□ -1.96
Trim40Q3UWA4 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Trim40Q3UWA4 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Trim40Q3UWA4 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Trim40Q3UWA4 Mir101b-201ENSMUST00000083622 97 ntBASIC2.78□□□□□ -1.96
Trim40Q3UWA4 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Trim40Q3UWA4 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Trim40Q3UWA4 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
Trim40Q3UWA4 Gm44230-201ENSMUST00000203032 3550 ntBASIC2.77□□□□□ -1.97
Trim40Q3UWA4 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC2.77□□□□□ -1.97
Trim40Q3UWA4 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Trim40Q3UWA4 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Trim40Q3UWA4 Gm14448-201ENSMUST00000116383 210 ntBASIC2.77□□□□□ -1.97
Trim40Q3UWA4 Gm25773-201ENSMUST00000116718 127 ntBASIC2.77□□□□□ -1.97
Trim40Q3UWA4 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC2.77□□□□□ -1.97
Trim40Q3UWA4 Gm14987-201ENSMUST00000117820 676 ntBASIC2.77□□□□□ -1.97
Trim40Q3UWA4 Gm14868-201ENSMUST00000117840 216 ntBASIC2.77□□□□□ -1.97
Trim40Q3UWA4 Gm12723-201ENSMUST00000120700 451 ntBASIC2.77□□□□□ -1.97
Trim40Q3UWA4 Gm12006-201ENSMUST00000120786 403 ntBASIC2.77□□□□□ -1.97
Trim40Q3UWA4 Gm23470-201ENSMUST00000157129 120 ntBASIC2.77□□□□□ -1.97
Trim40Q3UWA4 Gm25637-201ENSMUST00000157529 107 ntBASIC2.77□□□□□ -1.97
Trim40Q3UWA4 Gm25835-201ENSMUST00000158917 144 ntBASIC2.77□□□□□ -1.97
Trim40Q3UWA4 Gm22290-201ENSMUST00000177655 107 ntBASIC2.77□□□□□ -1.97
Trim40Q3UWA4 Gm22583-201ENSMUST00000178031 107 ntBASIC2.77□□□□□ -1.97
Trim40Q3UWA4 Gm22166-201ENSMUST00000178419 121 ntBASIC2.77□□□□□ -1.97
Trim40Q3UWA4 Gm23288-201ENSMUST00000179213 121 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 89.6 ms