Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm7974-201ENSMUST00000117154 408 ntBASIC2.43□□□□□ -2.02
Upf3bQ3ULL6 Gm649-201ENSMUST00000117284 1054 ntBASIC2.43□□□□□ -2.02
Upf3bQ3ULL6 Gm14794-201ENSMUST00000118181 192 ntBASIC2.43□□□□□ -2.02
Upf3bQ3ULL6 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC2.43□□□□□ -2.02
Upf3bQ3ULL6 Gm14913-201ENSMUST00000120011 1093 ntBASIC2.43□□□□□ -2.02
Upf3bQ3ULL6 Gm22339-201ENSMUST00000157718 62 ntBASIC2.43□□□□□ -2.02
Upf3bQ3ULL6 Gm16561-201ENSMUST00000163001 192 ntBASIC2.43□□□□□ -2.02
Upf3bQ3ULL6 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Upf3bQ3ULL6 Gm24497-201ENSMUST00000177868 191 ntBASIC2.43□□□□□ -2.02
Upf3bQ3ULL6 Gm25939-201ENSMUST00000179876 191 ntBASIC2.43□□□□□ -2.02
Upf3bQ3ULL6 Gm17929-201ENSMUST00000186851 627 ntBASIC2.43□□□□□ -2.02
Upf3bQ3ULL6 Gm28779-201ENSMUST00000189678 323 ntBASIC2.43□□□□□ -2.02
Upf3bQ3ULL6 Gm29192-201ENSMUST00000190942 377 ntBASIC2.43□□□□□ -2.02
Upf3bQ3ULL6 Gm37684-201ENSMUST00000192779 355 ntBASIC2.43□□□□□ -2.02
Upf3bQ3ULL6 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC2.43□□□□□ -2.02
Upf3bQ3ULL6 Gm43070-201ENSMUST00000196938 415 ntBASIC2.43□□□□□ -2.02
Upf3bQ3ULL6 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Upf3bQ3ULL6 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC2.43□□□□□ -2.02
Upf3bQ3ULL6 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC2.43□□□□□ -2.02
Upf3bQ3ULL6 Gm45173-201ENSMUST00000206819 305 ntBASIC2.43□□□□□ -2.02
Upf3bQ3ULL6 Gm45048-201ENSMUST00000207058 429 ntBASIC2.43□□□□□ -2.02
Upf3bQ3ULL6 Gm17850-201ENSMUST00000210023 1154 ntBASIC2.43□□□□□ -2.02
Upf3bQ3ULL6 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC2.43□□□□□ -2.02
Upf3bQ3ULL6 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC2.43□□□□□ -2.02
Upf3bQ3ULL6 Gm23444-201ENSMUST00000082922 191 ntBASIC2.43□□□□□ -2.02
Upf3bQ3ULL6 Gm25403-201ENSMUST00000082971 143 ntBASIC2.43□□□□□ -2.02
Upf3bQ3ULL6 Gm23096-201ENSMUST00000083447 107 ntBASIC2.43□□□□□ -2.02
Upf3bQ3ULL6 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Upf3bQ3ULL6 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Upf3bQ3ULL6 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Upf3bQ3ULL6 Gm22936-201ENSMUST00000103955 126 ntBASIC2.42□□□□□ -2.02
Upf3bQ3ULL6 Gm26015-201ENSMUST00000104402 125 ntBASIC2.42□□□□□ -2.02
Upf3bQ3ULL6 Gm11490-201ENSMUST00000118128 272 ntBASIC2.42□□□□□ -2.02
Upf3bQ3ULL6 Gm14554-201ENSMUST00000119548 661 ntBASIC2.42□□□□□ -2.02
Upf3bQ3ULL6 Gm14736-201ENSMUST00000121470 336 ntBASIC2.42□□□□□ -2.02
Upf3bQ3ULL6 Gm11471-201ENSMUST00000121824 198 ntBASIC2.42□□□□□ -2.02
Upf3bQ3ULL6 Gm14363-201ENSMUST00000122304 409 ntBASIC2.42□□□□□ -2.02
Upf3bQ3ULL6 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.42□□□□□ -2.02
Upf3bQ3ULL6 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Upf3bQ3ULL6 Gm26280-201ENSMUST00000157096 101 ntBASIC2.42□□□□□ -2.02
Upf3bQ3ULL6 Mir1927-201ENSMUST00000158579 109 ntBASIC2.42□□□□□ -2.02
Upf3bQ3ULL6 Gm18397-201ENSMUST00000176704 587 ntBASIC2.42□□□□□ -2.02
Upf3bQ3ULL6 Gm29460-201ENSMUST00000188607 714 ntBASIC2.42□□□□□ -2.02
Upf3bQ3ULL6 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC2.42□□□□□ -2.02
Upf3bQ3ULL6 Gm19252-201ENSMUST00000204705 305 ntBASIC2.42□□□□□ -2.02
Upf3bQ3ULL6 Gm44478-201ENSMUST00000204875 114 ntBASIC2.42□□□□□ -2.02
Upf3bQ3ULL6 AC157570.3-201ENSMUST00000219281 205 ntBASIC2.42□□□□□ -2.02
Upf3bQ3ULL6 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Upf3bQ3ULL6 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.42□□□□□ -2.02
Upf3bQ3ULL6 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Upf3bQ3ULL6 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Upf3bQ3ULL6 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Upf3bQ3ULL6 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
Upf3bQ3ULL6 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
Upf3bQ3ULL6 Gm23691-201ENSMUST00000101878 107 ntBASIC2.41□□□□□ -2.02
Upf3bQ3ULL6 Gm25529-201ENSMUST00000104850 92 ntBASIC2.41□□□□□ -2.02
Upf3bQ3ULL6 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC2.41□□□□□ -2.02
Upf3bQ3ULL6 Gm14848-201ENSMUST00000121850 467 ntBASIC2.41□□□□□ -2.02
Upf3bQ3ULL6 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC2.41□□□□□ -2.02
Upf3bQ3ULL6 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Upf3bQ3ULL6 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC2.41□□□□□ -2.02
Upf3bQ3ULL6 Gm25910-201ENSMUST00000157620 140 ntBASIC2.41□□□□□ -2.02
Upf3bQ3ULL6 Gm24546-201ENSMUST00000158652 102 ntBASIC2.41□□□□□ -2.02
Upf3bQ3ULL6 Gm8292-201ENSMUST00000162574 396 ntBASIC2.41□□□□□ -2.02
Upf3bQ3ULL6 Gm5224-201ENSMUST00000183060 350 ntBASIC2.41□□□□□ -2.02
Upf3bQ3ULL6 Gm7329-201ENSMUST00000185915 210 ntBASIC2.41□□□□□ -2.02
Upf3bQ3ULL6 Gm19193-201ENSMUST00000190263 590 ntBASIC2.41□□□□□ -2.02
Upf3bQ3ULL6 Gm7837-201ENSMUST00000190873 412 ntBASIC2.41□□□□□ -2.02
Upf3bQ3ULL6 Gm37037-201ENSMUST00000194475 424 ntBASIC2.41□□□□□ -2.02
Upf3bQ3ULL6 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC2.41□□□□□ -2.02
Upf3bQ3ULL6 Gm19202-201ENSMUST00000198096 808 ntBASIC2.41□□□□□ -2.02
Upf3bQ3ULL6 Gm43979-201ENSMUST00000203179 475 ntBASIC2.41□□□□□ -2.02
Upf3bQ3ULL6 Gm45049-201ENSMUST00000207586 591 ntBASIC2.41□□□□□ -2.02
Upf3bQ3ULL6 CT010455.1-201ENSMUST00000218579 413 ntBASIC2.41□□□□□ -2.02
Upf3bQ3ULL6 CT030159.4-201ENSMUST00000221966 395 ntBASIC2.41□□□□□ -2.02
Upf3bQ3ULL6 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Upf3bQ3ULL6 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Upf3bQ3ULL6 Gm24313-201ENSMUST00000082561 133 ntBASIC2.41□□□□□ -2.02
Upf3bQ3ULL6 Gm26128-201ENSMUST00000083170 110 ntBASIC2.41□□□□□ -2.02
Upf3bQ3ULL6 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Upf3bQ3ULL6 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC2.41□□□□□ -2.02
Upf3bQ3ULL6 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.02
Upf3bQ3ULL6 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
Upf3bQ3ULL6 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.02
Upf3bQ3ULL6 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
Upf3bQ3ULL6 Gm11460-201ENSMUST00000118200 361 ntBASIC2.4□□□□□ -2.03
Upf3bQ3ULL6 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC2.4□□□□□ -2.03
Upf3bQ3ULL6 Gm13880-201ENSMUST00000118421 474 ntBASIC2.4□□□□□ -2.03
Upf3bQ3ULL6 Gm9440-201ENSMUST00000119667 539 ntBASIC2.4□□□□□ -2.03
Upf3bQ3ULL6 Gm13239-201ENSMUST00000119920 637 ntBASIC2.4□□□□□ -2.03
Upf3bQ3ULL6 n-R5s216-201ENSMUST00000122755 112 ntBASIC2.4□□□□□ -2.03
Upf3bQ3ULL6 Gm12238-201ENSMUST00000127764 124 ntBASIC2.4□□□□□ -2.03
Upf3bQ3ULL6 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC2.4□□□□□ -2.03
Upf3bQ3ULL6 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC2.4□□□□□ -2.03
Upf3bQ3ULL6 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
Upf3bQ3ULL6 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC2.4□□□□□ -2.03
Upf3bQ3ULL6 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC2.4□□□□□ -2.03
Upf3bQ3ULL6 Mir3092-201ENSMUST00000174954 96 ntBASIC2.4□□□□□ -2.03
Upf3bQ3ULL6 Gm24813-201ENSMUST00000175310 84 ntBASIC2.4□□□□□ -2.03
Upf3bQ3ULL6 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 115.7 ms