Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Gm21726-201ENSMUST00000179654 392 ntBASIC4.45□□□□□ -1.7
Rnf180Q3U827 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC4.45□□□□□ -1.7
Rnf180Q3U827 Gm42621-201ENSMUST00000198114 275 ntBASIC4.45□□□□□ -1.7
Rnf180Q3U827 Gm18854-201ENSMUST00000211196 329 ntBASIC4.45□□□□□ -1.7
Rnf180Q3U827 AL450317.1-201ENSMUST00000213941 291 ntBASIC4.45□□□□□ -1.7
Rnf180Q3U827 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Rnf180Q3U827 AC121966.1-201ENSMUST00000221458 282 ntBASIC4.45□□□□□ -1.7
Rnf180Q3U827 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
Rnf180Q3U827 Snord15a-201ENSMUST00000083888 148 ntBASIC4.45□□□□□ -1.7
Rnf180Q3U827 Gm5670-201ENSMUST00000093546 372 ntBASIC4.45□□□□□ -1.7
Rnf180Q3U827 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC4.45□□□□□ -1.7
Rnf180Q3U827 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Rnf180Q3U827 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
Rnf180Q3U827 Gm40020-201ENSMUST00000215677 1635 ntBASIC4.45□□□□□ -1.7
Rnf180Q3U827 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Rnf180Q3U827 Gm38091-201ENSMUST00000192418 3871 ntBASIC4.45□□□□□ -1.7
Rnf180Q3U827 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Rnf180Q3U827 Gm45131-201ENSMUST00000208051 2582 ntBASIC4.45□□□□□ -1.7
Rnf180Q3U827 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Rnf180Q3U827 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
Rnf180Q3U827 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Rnf180Q3U827 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Rnf180Q3U827 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Rnf180Q3U827 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Rnf180Q3U827 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Rnf180Q3U827 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Rnf180Q3U827 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Rnf180Q3U827 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Rnf180Q3U827 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Rnf180Q3U827 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Rnf180Q3U827 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Rnf180Q3U827 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Rnf180Q3U827 Gm42536-201ENSMUST00000197562 1613 ntBASIC4.44□□□□□ -1.7
Rnf180Q3U827 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Rnf180Q3U827 Gm12871-201ENSMUST00000118758 438 ntBASIC4.44□□□□□ -1.7
Rnf180Q3U827 Gm12803-201ENSMUST00000118907 821 ntBASIC4.44□□□□□ -1.7
Rnf180Q3U827 Gm16216-201ENSMUST00000118970 1111 ntBASIC4.44□□□□□ -1.7
Rnf180Q3U827 Gm13787-201ENSMUST00000120422 168 ntBASIC4.44□□□□□ -1.7
Rnf180Q3U827 Gm11281-201ENSMUST00000141391 576 ntBASIC4.44□□□□□ -1.7
Rnf180Q3U827 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC4.44□□□□□ -1.7
Rnf180Q3U827 Gm6058-201ENSMUST00000154261 399 ntBASIC4.44□□□□□ -1.7
Rnf180Q3U827 Gm25707-201ENSMUST00000175120 96 ntBASIC4.44□□□□□ -1.7
Rnf180Q3U827 Gm22242-201ENSMUST00000175224 118 ntBASIC4.44□□□□□ -1.7
Rnf180Q3U827 Gm7909-201ENSMUST00000182688 614 ntBASIC4.44□□□□□ -1.7
Rnf180Q3U827 Gm37431-201ENSMUST00000195102 111 ntBASIC4.44□□□□□ -1.7
Rnf180Q3U827 AC154506.1-201ENSMUST00000225178 621 ntBASIC4.44□□□□□ -1.7
Rnf180Q3U827 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Rnf180Q3U827 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
Rnf180Q3U827 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Rnf180Q3U827 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Rnf180Q3U827 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC4.44□□□□□ -1.7
Rnf180Q3U827 Gm43870-201ENSMUST00000205102 4369 ntBASIC4.44□□□□□ -1.7
Rnf180Q3U827 AC161254.1-201ENSMUST00000220310 3842 ntBASIC4.43□□□□□ -1.7
Rnf180Q3U827 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Rnf180Q3U827 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Rnf180Q3U827 Gm13228-201ENSMUST00000118937 634 ntBASIC4.43□□□□□ -1.7
Rnf180Q3U827 Gm13873-201ENSMUST00000119208 427 ntBASIC4.43□□□□□ -1.7
Rnf180Q3U827 Gm11849-201ENSMUST00000121293 261 ntBASIC4.43□□□□□ -1.7
Rnf180Q3U827 Gm8840-201ENSMUST00000122454 386 ntBASIC4.43□□□□□ -1.7
Rnf180Q3U827 Gm22107-201ENSMUST00000122548 100 ntBASIC4.43□□□□□ -1.7
Rnf180Q3U827 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC4.43□□□□□ -1.7
Rnf180Q3U827 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC4.43□□□□□ -1.7
Rnf180Q3U827 Gm22791-201ENSMUST00000157232 145 ntBASIC4.43□□□□□ -1.7
Rnf180Q3U827 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC4.43□□□□□ -1.7
Rnf180Q3U827 Gm26430-201ENSMUST00000178054 107 ntBASIC4.43□□□□□ -1.7
Rnf180Q3U827 Mir8116-201ENSMUST00000184134 97 ntBASIC4.43□□□□□ -1.7
Rnf180Q3U827 Gm44543-201ENSMUST00000209136 396 ntBASIC4.43□□□□□ -1.7
Rnf180Q3U827 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
Rnf180Q3U827 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC4.43□□□□□ -1.7
Rnf180Q3U827 AC164567.2-201ENSMUST00000219363 445 ntBASIC4.43□□□□□ -1.7
Rnf180Q3U827 CT025548.1-201ENSMUST00000227459 257 ntBASIC4.43□□□□□ -1.7
Rnf180Q3U827 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC4.43□□□□□ -1.7
Rnf180Q3U827 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Rnf180Q3U827 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Rnf180Q3U827 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Rnf180Q3U827 Gm14890-201ENSMUST00000117660 676 ntBASIC4.42□□□□□ -1.7
Rnf180Q3U827 Gm14897-201ENSMUST00000118213 207 ntBASIC4.42□□□□□ -1.7
Rnf180Q3U827 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC4.42□□□□□ -1.7
Rnf180Q3U827 Gm22561-201ENSMUST00000157331 84 ntBASIC4.42□□□□□ -1.7
Rnf180Q3U827 Gm22219-201ENSMUST00000157562 319 ntBASIC4.42□□□□□ -1.7
Rnf180Q3U827 Gm23068-201ENSMUST00000158239 293 ntBASIC4.42□□□□□ -1.7
Rnf180Q3U827 Gm25369-201ENSMUST00000158848 132 ntBASIC4.42□□□□□ -1.7
Rnf180Q3U827 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC4.42□□□□□ -1.7
Rnf180Q3U827 Gm28008-201ENSMUST00000184021 186 ntBASIC4.42□□□□□ -1.7
Rnf180Q3U827 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC4.42□□□□□ -1.7
Rnf180Q3U827 Gm37661-201ENSMUST00000191863 1550 ntBASIC4.42□□□□□ -1.7
Rnf180Q3U827 AC122905.2-201ENSMUST00000220325 269 ntBASIC4.42□□□□□ -1.7
Rnf180Q3U827 AC173115.1-201ENSMUST00000220835 211 ntBASIC4.42□□□□□ -1.7
Rnf180Q3U827 AC113031.3-201ENSMUST00000226552 190 ntBASIC4.42□□□□□ -1.7
Rnf180Q3U827 Snord42a-201ENSMUST00000082606 65 ntBASIC4.42□□□□□ -1.7
Rnf180Q3U827 Gm24626-201ENSMUST00000082621 161 ntBASIC4.42□□□□□ -1.7
Rnf180Q3U827 Gm25755-201ENSMUST00000083396 107 ntBASIC4.42□□□□□ -1.7
Rnf180Q3U827 Mir202-201ENSMUST00000083568 72 ntBASIC4.42□□□□□ -1.7
Rnf180Q3U827 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Rnf180Q3U827 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Rnf180Q3U827 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Rnf180Q3U827 AC158921.1-201ENSMUST00000227861 3468 ntBASIC4.42□□□□□ -1.7
Rnf180Q3U827 Gm38069-201ENSMUST00000195360 2144 ntBASIC4.42□□□□□ -1.7
Rnf180Q3U827 Gm37387-201ENSMUST00000192201 1806 ntBASIC4.42□□□□□ -1.7
Rnf180Q3U827 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC4.41□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms