Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Usp39Q3TIX9 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.84□□□□□ -1.8
Usp39Q3TIX9 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
Usp39Q3TIX9 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC3.83□□□□□ -1.8
Usp39Q3TIX9 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
Usp39Q3TIX9 Gm37802-201ENSMUST00000194998 2643 ntBASIC3.83□□□□□ -1.8
Usp39Q3TIX9 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Usp39Q3TIX9 Gm22831-201ENSMUST00000102473 109 ntBASIC3.83□□□□□ -1.8
Usp39Q3TIX9 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Usp39Q3TIX9 Gm25169-201ENSMUST00000104190 129 ntBASIC3.83□□□□□ -1.8
Usp39Q3TIX9 Gm13046-201ENSMUST00000117391 501 ntBASIC3.83□□□□□ -1.8
Usp39Q3TIX9 Gm12686-201ENSMUST00000120546 397 ntBASIC3.83□□□□□ -1.8
Usp39Q3TIX9 Gm14473-201ENSMUST00000122269 557 ntBASIC3.83□□□□□ -1.8
Usp39Q3TIX9 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC3.83□□□□□ -1.8
Usp39Q3TIX9 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC3.83□□□□□ -1.8
Usp39Q3TIX9 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Usp39Q3TIX9 Gm24914-201ENSMUST00000157285 313 ntBASIC3.83□□□□□ -1.8
Usp39Q3TIX9 Gm25454-201ENSMUST00000157947 315 ntBASIC3.83□□□□□ -1.8
Usp39Q3TIX9 Gm25520-201ENSMUST00000158389 118 ntBASIC3.83□□□□□ -1.8
Usp39Q3TIX9 Gm16303-201ENSMUST00000161498 390 ntBASIC3.83□□□□□ -1.8
Usp39Q3TIX9 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
Usp39Q3TIX9 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC3.83□□□□□ -1.8
Usp39Q3TIX9 Gm26622-201ENSMUST00000180520 298 ntBASIC3.83□□□□□ -1.8
Usp39Q3TIX9 Mir6996-201ENSMUST00000183922 61 ntBASIC3.83□□□□□ -1.8
Usp39Q3TIX9 Mir7658-201ENSMUST00000184043 57 ntBASIC3.83□□□□□ -1.8
Usp39Q3TIX9 Mir6938-201ENSMUST00000184173 63 ntBASIC3.83□□□□□ -1.8
Usp39Q3TIX9 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC3.83□□□□□ -1.8
Usp39Q3TIX9 Gm19498-201ENSMUST00000191128 331 ntBASIC3.83□□□□□ -1.8
Usp39Q3TIX9 Gm44016-201ENSMUST00000203463 164 ntBASIC3.83□□□□□ -1.8
Usp39Q3TIX9 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC3.83□□□□□ -1.8
Usp39Q3TIX9 Gm44583-201ENSMUST00000207478 281 ntBASIC3.83□□□□□ -1.8
Usp39Q3TIX9 CT030242.2-201ENSMUST00000221588 148 ntBASIC3.83□□□□□ -1.8
Usp39Q3TIX9 AC154738.5-201ENSMUST00000227397 310 ntBASIC3.83□□□□□ -1.8
Usp39Q3TIX9 Gm6462-201ENSMUST00000081488 304 ntBASIC3.83□□□□□ -1.8
Usp39Q3TIX9 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Usp39Q3TIX9 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Usp39Q3TIX9 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Usp39Q3TIX9 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Usp39Q3TIX9 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Usp39Q3TIX9 Gm38069-201ENSMUST00000195360 2144 ntBASIC3.83□□□□□ -1.8
Usp39Q3TIX9 Gm43736-201ENSMUST00000196377 2281 ntBASIC3.83□□□□□ -1.8
Usp39Q3TIX9 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Usp39Q3TIX9 Gm3972-201ENSMUST00000173960 2861 ntBASIC3.83□□□□□ -1.8
Usp39Q3TIX9 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Usp39Q3TIX9 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Usp39Q3TIX9 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Usp39Q3TIX9 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC3.82□□□□□ -1.8
Usp39Q3TIX9 Gm21033-201ENSMUST00000208590 2608 ntBASIC3.82□□□□□ -1.8
Usp39Q3TIX9 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Usp39Q3TIX9 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Usp39Q3TIX9 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Usp39Q3TIX9 Gm24640-201ENSMUST00000116949 126 ntBASIC3.82□□□□□ -1.8
Usp39Q3TIX9 Gm22626-201ENSMUST00000116990 126 ntBASIC3.82□□□□□ -1.8
Usp39Q3TIX9 Gm11623-201ENSMUST00000120176 1225 ntBASIC3.82□□□□□ -1.8
Usp39Q3TIX9 Gm14845-201ENSMUST00000121259 306 ntBASIC3.82□□□□□ -1.8
Usp39Q3TIX9 Gm7618-201ENSMUST00000121643 171 ntBASIC3.82□□□□□ -1.8
Usp39Q3TIX9 Gm14559-201ENSMUST00000121745 496 ntBASIC3.82□□□□□ -1.8
Usp39Q3TIX9 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Usp39Q3TIX9 Gm26278-201ENSMUST00000157098 132 ntBASIC3.82□□□□□ -1.8
Usp39Q3TIX9 Gm25883-201ENSMUST00000157781 271 ntBASIC3.82□□□□□ -1.8
Usp39Q3TIX9 Gm23782-201ENSMUST00000157939 120 ntBASIC3.82□□□□□ -1.8
Usp39Q3TIX9 Gm26036-201ENSMUST00000158149 144 ntBASIC3.82□□□□□ -1.8
Usp39Q3TIX9 Gm5263-201ENSMUST00000163646 601 ntBASIC3.82□□□□□ -1.8
Usp39Q3TIX9 Gm24761-201ENSMUST00000179589 127 ntBASIC3.82□□□□□ -1.8
Usp39Q3TIX9 Gm24488-201ENSMUST00000179934 127 ntBASIC3.82□□□□□ -1.8
Usp39Q3TIX9 Gm25701-201ENSMUST00000179988 127 ntBASIC3.82□□□□□ -1.8
Usp39Q3TIX9 Gm26431-201ENSMUST00000180199 127 ntBASIC3.82□□□□□ -1.8
Usp39Q3TIX9 Gm9022-202ENSMUST00000183285 483 ntBASIC3.82□□□□□ -1.8
Usp39Q3TIX9 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC3.82□□□□□ -1.8
Usp39Q3TIX9 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC3.82□□□□□ -1.8
Usp39Q3TIX9 Gm37128-201ENSMUST00000192599 232 ntBASIC3.82□□□□□ -1.8
Usp39Q3TIX9 Gm44354-201ENSMUST00000196017 143 ntBASIC3.82□□□□□ -1.8
Usp39Q3TIX9 Gm43286-201ENSMUST00000197420 424 ntBASIC3.82□□□□□ -1.8
Usp39Q3TIX9 Gm7041-201ENSMUST00000201227 524 ntBASIC3.82□□□□□ -1.8
Usp39Q3TIX9 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC3.82□□□□□ -1.8
Usp39Q3TIX9 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Usp39Q3TIX9 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC3.82□□□□□ -1.8
Usp39Q3TIX9 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC3.82□□□□□ -1.8
Usp39Q3TIX9 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC3.82□□□□□ -1.8
Usp39Q3TIX9 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC3.82□□□□□ -1.8
Usp39Q3TIX9 Gm25801-201ENSMUST00000082638 106 ntBASIC3.82□□□□□ -1.8
Usp39Q3TIX9 Gm26164-201ENSMUST00000083793 104 ntBASIC3.82□□□□□ -1.8
Usp39Q3TIX9 Gm5670-201ENSMUST00000093546 372 ntBASIC3.82□□□□□ -1.8
Usp39Q3TIX9 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Usp39Q3TIX9 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Usp39Q3TIX9 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Usp39Q3TIX9 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
Usp39Q3TIX9 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC3.81□□□□□ -1.8
Usp39Q3TIX9 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Usp39Q3TIX9 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Usp39Q3TIX9 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Usp39Q3TIX9 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Usp39Q3TIX9 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Usp39Q3TIX9 Gm23578-201ENSMUST00000103943 104 ntBASIC3.81□□□□□ -1.8
Usp39Q3TIX9 Gm14816-201ENSMUST00000117174 294 ntBASIC3.81□□□□□ -1.8
Usp39Q3TIX9 Gm13567-201ENSMUST00000118026 247 ntBASIC3.81□□□□□ -1.8
Usp39Q3TIX9 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC3.81□□□□□ -1.8
Usp39Q3TIX9 Gm14875-201ENSMUST00000120881 319 ntBASIC3.81□□□□□ -1.8
Usp39Q3TIX9 Gm23463-201ENSMUST00000122468 99 ntBASIC3.81□□□□□ -1.8
Usp39Q3TIX9 Gm25965-201ENSMUST00000157170 93 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 95.4 ms