Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm25529-201ENSMUST00000104850 92 ntBASIC5.19□□□□□ -1.58
Col17a1Q07563 Gm15113-201ENSMUST00000119280 836 ntBASIC5.19□□□□□ -1.58
Col17a1Q07563 Ear-ps8-201ENSMUST00000161935 354 ntBASIC5.19□□□□□ -1.58
Col17a1Q07563 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Col17a1Q07563 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC5.19□□□□□ -1.58
Col17a1Q07563 Gm42539-201ENSMUST00000197009 308 ntBASIC5.19□□□□□ -1.58
Col17a1Q07563 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC5.19□□□□□ -1.58
Col17a1Q07563 Gm45013-201ENSMUST00000206883 178 ntBASIC5.19□□□□□ -1.58
Col17a1Q07563 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC5.19□□□□□ -1.58
Col17a1Q07563 AC100590.2-201ENSMUST00000219028 215 ntBASIC5.19□□□□□ -1.58
Col17a1Q07563 Gm46996-201ENSMUST00000220924 408 ntBASIC5.19□□□□□ -1.58
Col17a1Q07563 Mir421-201ENSMUST00000083575 76 ntBASIC5.19□□□□□ -1.58
Col17a1Q07563 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col17a1Q07563 AC121844.2-201ENSMUST00000219067 2066 ntBASIC5.18□□□□□ -1.58
Col17a1Q07563 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col17a1Q07563 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Col17a1Q07563 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC5.18□□□□□ -1.58
Col17a1Q07563 Gm11284-201ENSMUST00000121910 1887 ntBASIC5.18□□□□□ -1.58
Col17a1Q07563 Gm43092-201ENSMUST00000202986 1854 ntBASIC5.18□□□□□ -1.58
Col17a1Q07563 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Col17a1Q07563 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col17a1Q07563 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col17a1Q07563 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Col17a1Q07563 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC5.18□□□□□ -1.58
Col17a1Q07563 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC5.18□□□□□ -1.58
Col17a1Q07563 Ighv2-8-201ENSMUST00000193935 262 ntBASIC5.18□□□□□ -1.58
Col17a1Q07563 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC5.18□□□□□ -1.58
Col17a1Q07563 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC5.18□□□□□ -1.58
Col17a1Q07563 Gm25859-201ENSMUST00000083710 91 ntBASIC5.18□□□□□ -1.58
Col17a1Q07563 Gm10222-201ENSMUST00000088336 294 ntBASIC5.18□□□□□ -1.58
Col17a1Q07563 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
Col17a1Q07563 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Col17a1Q07563 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC5.17□□□□□ -1.58
Col17a1Q07563 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col17a1Q07563 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col17a1Q07563 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col17a1Q07563 Gm14731-201ENSMUST00000119216 376 ntBASIC5.17□□□□□ -1.58
Col17a1Q07563 Gm12607-201ENSMUST00000120724 493 ntBASIC5.17□□□□□ -1.58
Col17a1Q07563 Gm14980-201ENSMUST00000121247 736 ntBASIC5.17□□□□□ -1.58
Col17a1Q07563 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC5.17□□□□□ -1.58
Col17a1Q07563 Gm11229-201ENSMUST00000121993 437 ntBASIC5.17□□□□□ -1.58
Col17a1Q07563 Gm22378-201ENSMUST00000157481 111 ntBASIC5.17□□□□□ -1.58
Col17a1Q07563 Gm27579-201ENSMUST00000158113 63 ntBASIC5.17□□□□□ -1.58
Col17a1Q07563 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col17a1Q07563 Gm43541-201ENSMUST00000197208 581 ntBASIC5.17□□□□□ -1.58
Col17a1Q07563 Gm43600-201ENSMUST00000202134 223 ntBASIC5.17□□□□□ -1.58
Col17a1Q07563 AC168266.1-201ENSMUST00000216024 226 ntBASIC5.17□□□□□ -1.58
Col17a1Q07563 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col17a1Q07563 CT025606.1-201ENSMUST00000218273 324 ntBASIC5.17□□□□□ -1.58
Col17a1Q07563 AC155830.1-201ENSMUST00000220050 3836 ntBASIC5.17□□□□□ -1.58
Col17a1Q07563 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Col17a1Q07563 Gm26072-201ENSMUST00000083135 107 ntBASIC5.17□□□□□ -1.58
Col17a1Q07563 Mir129-2-201ENSMUST00000083577 90 ntBASIC5.17□□□□□ -1.58
Col17a1Q07563 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC5.17□□□□□ -1.58
Col17a1Q07563 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC5.17□□□□□ -1.58
Col17a1Q07563 Gm42967-201ENSMUST00000198647 2312 ntBASIC5.17□□□□□ -1.58
Col17a1Q07563 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col17a1Q07563 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Col17a1Q07563 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Col17a1Q07563 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC5.16□□□□□ -1.58
Col17a1Q07563 Gm44114-201ENSMUST00000203270 2727 ntBASIC5.16□□□□□ -1.58
Col17a1Q07563 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col17a1Q07563 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC5.16□□□□□ -1.58
Col17a1Q07563 Gm25425-201ENSMUST00000157611 96 ntBASIC5.16□□□□□ -1.58
Col17a1Q07563 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Col17a1Q07563 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC5.16□□□□□ -1.58
Col17a1Q07563 Zfp-ps-201ENSMUST00000185025 478 ntBASIC5.16□□□□□ -1.58
Col17a1Q07563 Mir6418-201ENSMUST00000185075 115 ntBASIC5.16□□□□□ -1.58
Col17a1Q07563 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC5.16□□□□□ -1.58
Col17a1Q07563 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC5.16□□□□□ -1.58
Col17a1Q07563 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC5.16□□□□□ -1.58
Col17a1Q07563 Gm18000-201ENSMUST00000212153 800 ntBASIC5.16□□□□□ -1.58
Col17a1Q07563 AC154515.2-201ENSMUST00000226093 406 ntBASIC5.16□□□□□ -1.58
Col17a1Q07563 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col17a1Q07563 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Col17a1Q07563 n-R5s37-201ENSMUST00000082533 118 ntBASIC5.16□□□□□ -1.58
Col17a1Q07563 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Col17a1Q07563 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Col17a1Q07563 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Col17a1Q07563 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col17a1Q07563 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC5.15□□□□□ -1.58
Col17a1Q07563 Gm13788-201ENSMUST00000120767 601 ntBASIC5.15□□□□□ -1.58
Col17a1Q07563 Gm23753-201ENSMUST00000157575 149 ntBASIC5.15□□□□□ -1.58
Col17a1Q07563 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC5.15□□□□□ -1.58
Col17a1Q07563 Mir3076-201ENSMUST00000175415 60 ntBASIC5.15□□□□□ -1.58
Col17a1Q07563 Gm27428-201ENSMUST00000184289 110 ntBASIC5.15□□□□□ -1.58
Col17a1Q07563 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC5.15□□□□□ -1.58
Col17a1Q07563 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC5.15□□□□□ -1.58
Col17a1Q07563 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Col17a1Q07563 Gm44923-201ENSMUST00000206673 85 ntBASIC5.15□□□□□ -1.58
Col17a1Q07563 AL669916.3-201ENSMUST00000213855 94 ntBASIC5.15□□□□□ -1.58
Col17a1Q07563 AL669916.6-201ENSMUST00000214610 94 ntBASIC5.15□□□□□ -1.58
Col17a1Q07563 AL669916.4-201ENSMUST00000215976 94 ntBASIC5.15□□□□□ -1.58
Col17a1Q07563 AL669916.1-201ENSMUST00000217640 94 ntBASIC5.15□□□□□ -1.58
Col17a1Q07563 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC5.15□□□□□ -1.58
Col17a1Q07563 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Col17a1Q07563 AC166358.10-201ENSMUST00000220556 144 ntBASIC5.15□□□□□ -1.58
Col17a1Q07563 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Col17a1Q07563 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Col17a1Q07563 Gm10025-201ENSMUST00000079568 372 ntBASIC5.15□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 97.3 ms