Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Mir701-201ENSMUST00000102208 109 ntBASIC4.71□□□□□ -1.66
Col6a1Q04857 Mir676-201ENSMUST00000102443 89 ntBASIC4.71□□□□□ -1.66
Col6a1Q04857 Gm23175-201ENSMUST00000104371 132 ntBASIC4.71□□□□□ -1.66
Col6a1Q04857 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC4.71□□□□□ -1.66
Col6a1Q04857 Gm12512-201ENSMUST00000119620 217 ntBASIC4.71□□□□□ -1.66
Col6a1Q04857 Gm15926-201ENSMUST00000120492 550 ntBASIC4.71□□□□□ -1.66
Col6a1Q04857 Gm13153-201ENSMUST00000120969 637 ntBASIC4.71□□□□□ -1.66
Col6a1Q04857 AA413626-201ENSMUST00000121125 494 ntBASIC4.71□□□□□ -1.66
Col6a1Q04857 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC4.71□□□□□ -1.66
Col6a1Q04857 Gm22814-201ENSMUST00000157452 104 ntBASIC4.71□□□□□ -1.66
Col6a1Q04857 Gm25908-201ENSMUST00000157624 98 ntBASIC4.71□□□□□ -1.66
Col6a1Q04857 Gm10357-201ENSMUST00000159886 264 ntBASIC4.71□□□□□ -1.66
Col6a1Q04857 Gm24168-201ENSMUST00000178825 107 ntBASIC4.71□□□□□ -1.66
Col6a1Q04857 Gm24520-201ENSMUST00000179510 110 ntBASIC4.71□□□□□ -1.66
Col6a1Q04857 Gm10292-201ENSMUST00000183142 581 ntBASIC4.71□□□□□ -1.66
Col6a1Q04857 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC4.71□□□□□ -1.66
Col6a1Q04857 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC4.71□□□□□ -1.66
Col6a1Q04857 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Col6a1Q04857 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Col6a1Q04857 Gm22571-201ENSMUST00000082984 70 ntBASIC4.71□□□□□ -1.66
Col6a1Q04857 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Col6a1Q04857 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
Col6a1Q04857 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
Col6a1Q04857 Gm37045-201ENSMUST00000192016 2463 ntBASIC4.71□□□□□ -1.66
Col6a1Q04857 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Col6a1Q04857 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC4.71□□□□□ -1.66
Col6a1Q04857 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Col6a1Q04857 Gm45854-201ENSMUST00000211857 3488 ntBASIC4.71□□□□□ -1.66
Col6a1Q04857 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Col6a1Q04857 Hm629797-201ENSMUST00000183645 2398 ntBASIC4.7□□□□□ -1.66
Col6a1Q04857 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Col6a1Q04857 Gm42583-201ENSMUST00000202678 6700 ntBASIC4.7□□□□□ -1.66
Col6a1Q04857 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col6a1Q04857 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col6a1Q04857 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col6a1Q04857 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col6a1Q04857 Gm13901-201ENSMUST00000137252 468 ntBASIC4.7□□□□□ -1.66
Col6a1Q04857 Gm27926-201ENSMUST00000157180 66 ntBASIC4.7□□□□□ -1.66
Col6a1Q04857 Gm26041-201ENSMUST00000158148 108 ntBASIC4.7□□□□□ -1.66
Col6a1Q04857 Gm24314-201ENSMUST00000158274 123 ntBASIC4.7□□□□□ -1.66
Col6a1Q04857 Gm24001-201ENSMUST00000158463 85 ntBASIC4.7□□□□□ -1.66
Col6a1Q04857 Gm6374-201ENSMUST00000159051 788 ntBASIC4.7□□□□□ -1.66
Col6a1Q04857 Gm17072-201ENSMUST00000166673 658 ntBASIC4.7□□□□□ -1.66
Col6a1Q04857 Gm44446-201ENSMUST00000204864 255 ntBASIC4.7□□□□□ -1.66
Col6a1Q04857 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC4.7□□□□□ -1.66
Col6a1Q04857 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Col6a1Q04857 Snora7a-201ENSMUST00000082629 140 ntBASIC4.7□□□□□ -1.66
Col6a1Q04857 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Col6a1Q04857 Gm15773-201ENSMUST00000118665 1448 ntBASIC4.7□□□□□ -1.66
Col6a1Q04857 Gm21033-201ENSMUST00000208590 2608 ntBASIC4.7□□□□□ -1.66
Col6a1Q04857 Gm9343-201ENSMUST00000209016 2609 ntBASIC4.7□□□□□ -1.66
Col6a1Q04857 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Col6a1Q04857 Gm14421-201ENSMUST00000121755 1958 ntBASIC4.69□□□□□ -1.66
Col6a1Q04857 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Col6a1Q04857 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Col6a1Q04857 Gm38259-201ENSMUST00000194602 3534 ntBASIC4.69□□□□□ -1.66
Col6a1Q04857 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Col6a1Q04857 Gm43923-201ENSMUST00000203992 2911 ntBASIC4.69□□□□□ -1.66
Col6a1Q04857 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.69□□□□□ -1.66
Col6a1Q04857 Gm24788-201ENSMUST00000104283 156 ntBASIC4.69□□□□□ -1.66
Col6a1Q04857 Gm15151-201ENSMUST00000117106 177 ntBASIC4.69□□□□□ -1.66
Col6a1Q04857 Gm14861-201ENSMUST00000119451 455 ntBASIC4.69□□□□□ -1.66
Col6a1Q04857 Gm23557-201ENSMUST00000157820 138 ntBASIC4.69□□□□□ -1.66
Col6a1Q04857 Gm3851-201ENSMUST00000168653 318 ntBASIC4.69□□□□□ -1.66
Col6a1Q04857 Mir1251-201ENSMUST00000175486 84 ntBASIC4.69□□□□□ -1.66
Col6a1Q04857 Gm22120-201ENSMUST00000175590 70 ntBASIC4.69□□□□□ -1.66
Col6a1Q04857 Gm24862-201ENSMUST00000179103 79 ntBASIC4.69□□□□□ -1.66
Col6a1Q04857 Gm23310-201ENSMUST00000179105 79 ntBASIC4.69□□□□□ -1.66
Col6a1Q04857 Gm25461-201ENSMUST00000179293 79 ntBASIC4.69□□□□□ -1.66
Col6a1Q04857 Gm28263-201ENSMUST00000185884 400 ntBASIC4.69□□□□□ -1.66
Col6a1Q04857 Gm28921-201ENSMUST00000190219 378 ntBASIC4.69□□□□□ -1.66
Col6a1Q04857 Gm8820-201ENSMUST00000204077 571 ntBASIC4.69□□□□□ -1.66
Col6a1Q04857 AC172751.1-201ENSMUST00000226887 440 ntBASIC4.69□□□□□ -1.66
Col6a1Q04857 AC126440.1-201ENSMUST00000227098 349 ntBASIC4.69□□□□□ -1.66
Col6a1Q04857 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col6a1Q04857 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
Col6a1Q04857 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC4.69□□□□□ -1.66
Col6a1Q04857 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Col6a1Q04857 Gm37211-201ENSMUST00000193392 3433 ntBASIC4.69□□□□□ -1.66
Col6a1Q04857 Gm38106-201ENSMUST00000194107 2534 ntBASIC4.69□□□□□ -1.66
Col6a1Q04857 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
Col6a1Q04857 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Col6a1Q04857 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Col6a1Q04857 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a1Q04857 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Col6a1Q04857 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Col6a1Q04857 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a1Q04857 Gm23271-201ENSMUST00000104052 124 ntBASIC4.68□□□□□ -1.66
Col6a1Q04857 Gm24127-201ENSMUST00000104110 130 ntBASIC4.68□□□□□ -1.66
Col6a1Q04857 Gm25168-201ENSMUST00000104189 132 ntBASIC4.68□□□□□ -1.66
Col6a1Q04857 Gm25727-201ENSMUST00000104522 131 ntBASIC4.68□□□□□ -1.66
Col6a1Q04857 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Col6a1Q04857 Gm14008-201ENSMUST00000120483 274 ntBASIC4.68□□□□□ -1.66
Col6a1Q04857 Gm13345-201ENSMUST00000121928 228 ntBASIC4.68□□□□□ -1.66
Col6a1Q04857 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC4.68□□□□□ -1.66
Col6a1Q04857 Gm25384-201ENSMUST00000157807 105 ntBASIC4.68□□□□□ -1.66
Col6a1Q04857 Gm22433-201ENSMUST00000158550 142 ntBASIC4.68□□□□□ -1.66
Col6a1Q04857 Gm23112-201ENSMUST00000158606 125 ntBASIC4.68□□□□□ -1.66
Col6a1Q04857 Gm22257-201ENSMUST00000158687 301 ntBASIC4.68□□□□□ -1.66
Col6a1Q04857 Gm24976-201ENSMUST00000158972 135 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 130 ms