Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Sox18P43680 Gm13567-201ENSMUST00000118026 247 ntBASIC4.83□□□□□ -1.64
Sox18P43680 Gm14067-201ENSMUST00000119340 314 ntBASIC4.83□□□□□ -1.64
Sox18P43680 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC4.83□□□□□ -1.64
Sox18P43680 Gm5963-201ENSMUST00000143451 236 ntBASIC4.83□□□□□ -1.64
Sox18P43680 Gm2862-201ENSMUST00000161524 328 ntBASIC4.83□□□□□ -1.64
Sox18P43680 Gm26983-201ENSMUST00000182051 388 ntBASIC4.83□□□□□ -1.64
Sox18P43680 Gm43230-201ENSMUST00000200980 2129 ntBASIC4.83□□□□□ -1.64
Sox18P43680 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sox18P43680 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Sox18P43680 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC4.83□□□□□ -1.64
Sox18P43680 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sox18P43680 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sox18P43680 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sox18P43680 Gm45235-201ENSMUST00000208016 4465 ntBASIC4.83□□□□□ -1.64
Sox18P43680 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Sox18P43680 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sox18P43680 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Sox18P43680 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Sox18P43680 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Sox18P43680 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Sox18P43680 Gm45662-201ENSMUST00000210054 2098 ntBASIC4.82□□□□□ -1.64
Sox18P43680 Gm38382-201ENSMUST00000193790 2499 ntBASIC4.82□□□□□ -1.64
Sox18P43680 Gm26081-201ENSMUST00000104068 132 ntBASIC4.82□□□□□ -1.64
Sox18P43680 Gm25424-201ENSMUST00000157612 58 ntBASIC4.82□□□□□ -1.64
Sox18P43680 Gm24636-201ENSMUST00000158673 288 ntBASIC4.82□□□□□ -1.64
Sox18P43680 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Sox18P43680 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Sox18P43680 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC4.82□□□□□ -1.64
Sox18P43680 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Sox18P43680 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC4.82□□□□□ -1.64
Sox18P43680 AC140785.1-201ENSMUST00000217782 383 ntBASIC4.82□□□□□ -1.64
Sox18P43680 Snord22-201ENSMUST00000083153 126 ntBASIC4.82□□□□□ -1.64
Sox18P43680 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Sox18P43680 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Sox18P43680 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Sox18P43680 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Sox18P43680 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Sox18P43680 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Sox18P43680 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
Sox18P43680 Gm43025-201ENSMUST00000201764 1886 ntBASIC4.81□□□□□ -1.64
Sox18P43680 Gm6503-201ENSMUST00000210829 2225 ntBASIC4.81□□□□□ -1.64
Sox18P43680 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
Sox18P43680 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Sox18P43680 AC124579.1-201ENSMUST00000223468 2520 ntBASIC4.81□□□□□ -1.64
Sox18P43680 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Sox18P43680 Gm37180-201ENSMUST00000195335 2819 ntBASIC4.81□□□□□ -1.64
Sox18P43680 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Sox18P43680 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Sox18P43680 Mir872-201ENSMUST00000104728 81 ntBASIC4.81□□□□□ -1.64
Sox18P43680 Gm12427-201ENSMUST00000117719 302 ntBASIC4.81□□□□□ -1.64
Sox18P43680 Gm14878-201ENSMUST00000118167 293 ntBASIC4.81□□□□□ -1.64
Sox18P43680 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC4.81□□□□□ -1.64
Sox18P43680 Gm24720-201ENSMUST00000157518 166 ntBASIC4.81□□□□□ -1.64
Sox18P43680 Gm24186-201ENSMUST00000157983 127 ntBASIC4.81□□□□□ -1.64
Sox18P43680 Gm16546-201ENSMUST00000159442 355 ntBASIC4.81□□□□□ -1.64
Sox18P43680 Gm29308-201ENSMUST00000188863 315 ntBASIC4.81□□□□□ -1.64
Sox18P43680 Gm28537-201ENSMUST00000189026 315 ntBASIC4.81□□□□□ -1.64
Sox18P43680 Gm29631-201ENSMUST00000191065 315 ntBASIC4.81□□□□□ -1.64
Sox18P43680 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Sox18P43680 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC4.81□□□□□ -1.64
Sox18P43680 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC4.81□□□□□ -1.64
Sox18P43680 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC4.81□□□□□ -1.64
Sox18P43680 Gm40810-201ENSMUST00000219149 253 ntBASIC4.81□□□□□ -1.64
Sox18P43680 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC4.81□□□□□ -1.64
Sox18P43680 Gm23264-201ENSMUST00000083372 107 ntBASIC4.81□□□□□ -1.64
Sox18P43680 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Sox18P43680 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Sox18P43680 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Sox18P43680 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Sox18P43680 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
Sox18P43680 Gm37393-201ENSMUST00000195118 3870 ntBASIC4.81□□□□□ -1.64
Sox18P43680 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
Sox18P43680 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Sox18P43680 Gm42528-201ENSMUST00000200697 3418 ntBASIC4.81□□□□□ -1.64
Sox18P43680 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
Sox18P43680 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Sox18P43680 Gm38269-201ENSMUST00000194549 3298 ntBASIC4.8□□□□□ -1.64
Sox18P43680 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Sox18P43680 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Sox18P43680 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Sox18P43680 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Sox18P43680 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC4.8□□□□□ -1.64
Sox18P43680 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Sox18P43680 Mir761-201ENSMUST00000103245 76 ntBASIC4.8□□□□□ -1.64
Sox18P43680 Gm23273-201ENSMUST00000104058 135 ntBASIC4.8□□□□□ -1.64
Sox18P43680 Mir1b-201ENSMUST00000117012 122 ntBASIC4.8□□□□□ -1.64
Sox18P43680 Gm11196-201ENSMUST00000119052 395 ntBASIC4.8□□□□□ -1.64
Sox18P43680 Gm11790-201ENSMUST00000119569 455 ntBASIC4.8□□□□□ -1.64
Sox18P43680 Gm22883-201ENSMUST00000157376 106 ntBASIC4.8□□□□□ -1.64
Sox18P43680 Gm24961-201ENSMUST00000157918 184 ntBASIC4.8□□□□□ -1.64
Sox18P43680 Gm23260-201ENSMUST00000158317 172 ntBASIC4.8□□□□□ -1.64
Sox18P43680 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Sox18P43680 Gm5967-201ENSMUST00000172723 494 ntBASIC4.8□□□□□ -1.64
Sox18P43680 Mir6338-201ENSMUST00000183389 109 ntBASIC4.8□□□□□ -1.64
Sox18P43680 Gm37361-201ENSMUST00000194345 132 ntBASIC4.8□□□□□ -1.64
Sox18P43680 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC4.8□□□□□ -1.64
Sox18P43680 Gm44650-201ENSMUST00000206929 194 ntBASIC4.8□□□□□ -1.64
Sox18P43680 Gm45445-201ENSMUST00000209586 232 ntBASIC4.8□□□□□ -1.64
Sox18P43680 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC4.8□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 111.6 ms