Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC2.57□□□□□ -2
Cd40lgP27548 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC2.57□□□□□ -2
Cd40lgP27548 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC2.57□□□□□ -2
Cd40lgP27548 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC2.57□□□□□ -2
Cd40lgP27548 Gm24757-201ENSMUST00000176987 371 ntBASIC2.57□□□□□ -2
Cd40lgP27548 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC2.57□□□□□ -2
Cd40lgP27548 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
Cd40lgP27548 Gm28560-201ENSMUST00000186091 315 ntBASIC2.57□□□□□ -2
Cd40lgP27548 Gm28334-201ENSMUST00000186653 315 ntBASIC2.57□□□□□ -2
Cd40lgP27548 Gm28495-201ENSMUST00000188452 315 ntBASIC2.57□□□□□ -2
Cd40lgP27548 Gm6060-201ENSMUST00000188671 251 ntBASIC2.57□□□□□ -2
Cd40lgP27548 Gm28232-201ENSMUST00000188683 315 ntBASIC2.57□□□□□ -2
Cd40lgP27548 Gm28481-201ENSMUST00000189231 315 ntBASIC2.57□□□□□ -2
Cd40lgP27548 Gm29059-201ENSMUST00000191534 315 ntBASIC2.57□□□□□ -2
Cd40lgP27548 Gm37765-201ENSMUST00000192395 315 ntBASIC2.57□□□□□ -2
Cd40lgP27548 Gm37237-201ENSMUST00000192893 315 ntBASIC2.57□□□□□ -2
Cd40lgP27548 Gm36968-201ENSMUST00000193737 315 ntBASIC2.57□□□□□ -2
Cd40lgP27548 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC2.57□□□□□ -2
Cd40lgP27548 Gm38290-201ENSMUST00000195238 315 ntBASIC2.57□□□□□ -2
Cd40lgP27548 Gm43026-201ENSMUST00000202972 325 ntBASIC2.57□□□□□ -2
Cd40lgP27548 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC2.57□□□□□ -2
Cd40lgP27548 Gm7675-201ENSMUST00000208828 686 ntBASIC2.57□□□□□ -2
Cd40lgP27548 Gm30534-201ENSMUST00000217928 207 ntBASIC2.57□□□□□ -2
Cd40lgP27548 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Cd40lgP27548 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC2.57□□□□□ -2
Cd40lgP27548 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.57□□□□□ -2
Cd40lgP27548 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
Cd40lgP27548 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.57□□□□□ -2
Cd40lgP27548 Gm45262-201ENSMUST00000209917 1463 ntBASIC2.57□□□□□ -2
Cd40lgP27548 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
Cd40lgP27548 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Cd40lgP27548 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Cd40lgP27548 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
Cd40lgP27548 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Cd40lgP27548 Gm22936-201ENSMUST00000103955 126 ntBASIC2.56□□□□□ -2
Cd40lgP27548 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
Cd40lgP27548 Gm13751-201ENSMUST00000120280 752 ntBASIC2.56□□□□□ -2
Cd40lgP27548 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC2.56□□□□□ -2
Cd40lgP27548 Gm26424-201ENSMUST00000122530 104 ntBASIC2.56□□□□□ -2
Cd40lgP27548 Gm24517-201ENSMUST00000122560 107 ntBASIC2.56□□□□□ -2
Cd40lgP27548 Gm23213-201ENSMUST00000122715 313 ntBASIC2.56□□□□□ -2
Cd40lgP27548 Gm17187-201ENSMUST00000164622 410 ntBASIC2.56□□□□□ -2
Cd40lgP27548 Gm17377-201ENSMUST00000165184 207 ntBASIC2.56□□□□□ -2
Cd40lgP27548 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC2.56□□□□□ -2
Cd40lgP27548 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC2.56□□□□□ -2
Cd40lgP27548 Gm27582-201ENSMUST00000184084 126 ntBASIC2.56□□□□□ -2
Cd40lgP27548 Gm28647-201ENSMUST00000188416 197 ntBASIC2.56□□□□□ -2
Cd40lgP27548 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC2.56□□□□□ -2
Cd40lgP27548 Gm37987-201ENSMUST00000194999 825 ntBASIC2.56□□□□□ -2
Cd40lgP27548 Gm42924-201ENSMUST00000197261 185 ntBASIC2.56□□□□□ -2
Cd40lgP27548 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC2.56□□□□□ -2
Cd40lgP27548 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC2.56□□□□□ -2
Cd40lgP27548 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC2.56□□□□□ -2
Cd40lgP27548 AC159297.2-201ENSMUST00000219567 1075 ntBASIC2.56□□□□□ -2
Cd40lgP27548 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.56□□□□□ -2
Cd40lgP27548 AC155305.1-201ENSMUST00000222207 319 ntBASIC2.56□□□□□ -2
Cd40lgP27548 AC192334.2-201ENSMUST00000223087 1091 ntBASIC2.56□□□□□ -2
Cd40lgP27548 Gm23448-201ENSMUST00000083151 104 ntBASIC2.56□□□□□ -2
Cd40lgP27548 AC154386.1-201ENSMUST00000222753 2871 ntBASIC2.56□□□□□ -2
Cd40lgP27548 Gm43032-201ENSMUST00000197967 3123 ntBASIC2.56□□□□□ -2
Cd40lgP27548 Gm43896-201ENSMUST00000203440 2032 ntBASIC2.56□□□□□ -2
Cd40lgP27548 Gm37236-201ENSMUST00000193670 3249 ntBASIC2.55□□□□□ -2
Cd40lgP27548 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Cd40lgP27548 Gm15659-201ENSMUST00000118881 341 ntBASIC2.55□□□□□ -2
Cd40lgP27548 Gm14940-201ENSMUST00000119309 495 ntBASIC2.55□□□□□ -2
Cd40lgP27548 Gm12044-201ENSMUST00000120335 213 ntBASIC2.55□□□□□ -2
Cd40lgP27548 Gm12639-201ENSMUST00000121400 493 ntBASIC2.55□□□□□ -2
Cd40lgP27548 Gm15466-201ENSMUST00000122299 333 ntBASIC2.55□□□□□ -2
Cd40lgP27548 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC2.55□□□□□ -2
Cd40lgP27548 Gm22322-201ENSMUST00000157151 111 ntBASIC2.55□□□□□ -2
Cd40lgP27548 Gm17119-201ENSMUST00000163943 280 ntBASIC2.55□□□□□ -2
Cd40lgP27548 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC2.55□□□□□ -2
Cd40lgP27548 Gm17186-201ENSMUST00000171742 456 ntBASIC2.55□□□□□ -2
Cd40lgP27548 Gm18417-201ENSMUST00000176564 648 ntBASIC2.55□□□□□ -2
Cd40lgP27548 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC2.55□□□□□ -2
Cd40lgP27548 Mir6383-201ENSMUST00000184545 116 ntBASIC2.55□□□□□ -2
Cd40lgP27548 Gm29330-201ENSMUST00000190032 699 ntBASIC2.55□□□□□ -2
Cd40lgP27548 Gm28098-201ENSMUST00000191361 699 ntBASIC2.55□□□□□ -2
Cd40lgP27548 Gm44449-201ENSMUST00000203610 153 ntBASIC2.55□□□□□ -2
Cd40lgP27548 Gm44135-201ENSMUST00000205221 368 ntBASIC2.55□□□□□ -2
Cd40lgP27548 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC2.55□□□□□ -2
Cd40lgP27548 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Cd40lgP27548 Gm4921-201ENSMUST00000219804 992 ntBASIC2.55□□□□□ -2
Cd40lgP27548 AC165146.1-201ENSMUST00000223777 900 ntBASIC2.55□□□□□ -2
Cd40lgP27548 AC164597.2-201ENSMUST00000226738 603 ntBASIC2.55□□□□□ -2
Cd40lgP27548 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC2.55□□□□□ -2
Cd40lgP27548 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC2.55□□□□□ -2
Cd40lgP27548 Gm6030-201ENSMUST00000078768 402 ntBASIC2.55□□□□□ -2
Cd40lgP27548 Gm25199-201ENSMUST00000083095 104 ntBASIC2.55□□□□□ -2
Cd40lgP27548 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Cd40lgP27548 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.54□□□□□ -2
Cd40lgP27548 Gm26341-201ENSMUST00000104561 134 ntBASIC2.54□□□□□ -2
Cd40lgP27548 Gm23911-201ENSMUST00000104596 134 ntBASIC2.54□□□□□ -2
Cd40lgP27548 Mir190b-201ENSMUST00000104803 80 ntBASIC2.54□□□□□ -2
Cd40lgP27548 Gm14751-201ENSMUST00000117693 222 ntBASIC2.54□□□□□ -2
Cd40lgP27548 Gm12102-201ENSMUST00000118251 604 ntBASIC2.54□□□□□ -2
Cd40lgP27548 Gm15113-201ENSMUST00000119280 836 ntBASIC2.54□□□□□ -2
Cd40lgP27548 Gm12042-201ENSMUST00000120479 301 ntBASIC2.54□□□□□ -2
Cd40lgP27548 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.54□□□□□ -2
Cd40lgP27548 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC2.54□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms