Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Sdc1P18828 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Sdc1P18828 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Sdc1P18828 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Sdc1P18828 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Sdc1P18828 AC115891.1-201ENSMUST00000215798 1755 ntBASIC2.18□□□□□ -2.06
Sdc1P18828 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
Sdc1P18828 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Sdc1P18828 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Sdc1P18828 Gm22270-201ENSMUST00000104034 132 ntBASIC2.18□□□□□ -2.06
Sdc1P18828 Gm15110-201ENSMUST00000117545 881 ntBASIC2.18□□□□□ -2.06
Sdc1P18828 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC2.18□□□□□ -2.06
Sdc1P18828 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC2.18□□□□□ -2.06
Sdc1P18828 Gm26020-201ENSMUST00000122729 183 ntBASIC2.18□□□□□ -2.06
Sdc1P18828 Gm25292-201ENSMUST00000122797 322 ntBASIC2.18□□□□□ -2.06
Sdc1P18828 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC2.18□□□□□ -2.06
Sdc1P18828 Gm22849-201ENSMUST00000157713 307 ntBASIC2.18□□□□□ -2.06
Sdc1P18828 Gm17538-201ENSMUST00000168236 327 ntBASIC2.18□□□□□ -2.06
Sdc1P18828 Mir3470b-201ENSMUST00000175563 126 ntBASIC2.18□□□□□ -2.06
Sdc1P18828 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Sdc1P18828 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Sdc1P18828 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Sdc1P18828 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Sdc1P18828 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Sdc1P18828 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Sdc1P18828 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Sdc1P18828 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Sdc1P18828 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC2.18□□□□□ -2.06
Sdc1P18828 Gm28438-201ENSMUST00000188299 345 ntBASIC2.18□□□□□ -2.06
Sdc1P18828 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC2.18□□□□□ -2.06
Sdc1P18828 Gm44324-201ENSMUST00000198517 135 ntBASIC2.18□□□□□ -2.06
Sdc1P18828 Gm43955-201ENSMUST00000204332 142 ntBASIC2.18□□□□□ -2.06
Sdc1P18828 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC2.18□□□□□ -2.06
Sdc1P18828 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC2.18□□□□□ -2.06
Sdc1P18828 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Sdc1P18828 AC132465.3-201ENSMUST00000219326 195 ntBASIC2.18□□□□□ -2.06
Sdc1P18828 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC2.18□□□□□ -2.06
Sdc1P18828 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC2.18□□□□□ -2.06
Sdc1P18828 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC2.18□□□□□ -2.06
Sdc1P18828 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.18□□□□□ -2.06
Sdc1P18828 AC117814.1-201ENSMUST00000226135 352 ntBASIC2.18□□□□□ -2.06
Sdc1P18828 AC160930.1-201ENSMUST00000227194 337 ntBASIC2.18□□□□□ -2.06
Sdc1P18828 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Sdc1P18828 Gm23249-201ENSMUST00000083369 161 ntBASIC2.18□□□□□ -2.06
Sdc1P18828 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Sdc1P18828 Gm44625-201ENSMUST00000207838 1561 ntBASIC2.18□□□□□ -2.06
Sdc1P18828 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.17□□□□□ -2.06
Sdc1P18828 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
Sdc1P18828 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.17□□□□□ -2.06
Sdc1P18828 AC154481.2-201ENSMUST00000222526 3175 ntBASIC2.17□□□□□ -2.06
Sdc1P18828 Gm18751-201ENSMUST00000185777 2013 ntBASIC2.17□□□□□ -2.06
Sdc1P18828 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Sdc1P18828 Gm14868-201ENSMUST00000117840 216 ntBASIC2.17□□□□□ -2.06
Sdc1P18828 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC2.17□□□□□ -2.06
Sdc1P18828 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC2.17□□□□□ -2.06
Sdc1P18828 Gm14240-201ENSMUST00000120353 546 ntBASIC2.17□□□□□ -2.06
Sdc1P18828 Gm13913-201ENSMUST00000121126 260 ntBASIC2.17□□□□□ -2.06
Sdc1P18828 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Sdc1P18828 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC2.17□□□□□ -2.06
Sdc1P18828 Gm22098-201ENSMUST00000157930 85 ntBASIC2.17□□□□□ -2.06
Sdc1P18828 Gm25557-201ENSMUST00000158084 315 ntBASIC2.17□□□□□ -2.06
Sdc1P18828 Gm8580-201ENSMUST00000160295 464 ntBASIC2.17□□□□□ -2.06
Sdc1P18828 Gm6264-202ENSMUST00000162896 1217 ntBASIC2.17□□□□□ -2.06
Sdc1P18828 Gm3221-201ENSMUST00000164869 440 ntBASIC2.17□□□□□ -2.06
Sdc1P18828 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC2.17□□□□□ -2.06
Sdc1P18828 Gm28637-201ENSMUST00000179424 345 ntBASIC2.17□□□□□ -2.06
Sdc1P18828 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Sdc1P18828 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC2.17□□□□□ -2.06
Sdc1P18828 Gm21489-201ENSMUST00000189668 818 ntBASIC2.17□□□□□ -2.06
Sdc1P18828 Gm38311-201ENSMUST00000192945 165 ntBASIC2.17□□□□□ -2.06
Sdc1P18828 Ighv1-40-201ENSMUST00000194231 345 ntBASIC2.17□□□□□ -2.06
Sdc1P18828 Gm43652-201ENSMUST00000196219 675 ntBASIC2.17□□□□□ -2.06
Sdc1P18828 Igkv13-64-201ENSMUST00000198143 343 ntBASIC2.17□□□□□ -2.06
Sdc1P18828 Igkv1-108-201ENSMUST00000198926 298 ntBASIC2.17□□□□□ -2.06
Sdc1P18828 Gm45245-201ENSMUST00000210082 376 ntBASIC2.17□□□□□ -2.06
Sdc1P18828 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC2.17□□□□□ -2.06
Sdc1P18828 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.17□□□□□ -2.06
Sdc1P18828 AC117202.3-201ENSMUST00000228532 310 ntBASIC2.17□□□□□ -2.06
Sdc1P18828 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Sdc1P18828 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Sdc1P18828 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Sdc1P18828 Gm22061-201ENSMUST00000082557 107 ntBASIC2.17□□□□□ -2.06
Sdc1P18828 Gm23727-201ENSMUST00000083352 164 ntBASIC2.17□□□□□ -2.06
Sdc1P18828 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Sdc1P18828 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC2.17□□□□□ -2.06
Sdc1P18828 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Sdc1P18828 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC2.17□□□□□ -2.06
Sdc1P18828 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Sdc1P18828 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Sdc1P18828 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Sdc1P18828 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.16□□□□□ -2.06
Sdc1P18828 Gm26002-201ENSMUST00000101915 107 ntBASIC2.16□□□□□ -2.06
Sdc1P18828 Gm24792-201ENSMUST00000104286 128 ntBASIC2.16□□□□□ -2.06
Sdc1P18828 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Sdc1P18828 Gm15846-201ENSMUST00000116022 320 ntBASIC2.16□□□□□ -2.06
Sdc1P18828 Gm15029-201ENSMUST00000119742 199 ntBASIC2.16□□□□□ -2.06
Sdc1P18828 Gm13502-201ENSMUST00000121574 684 ntBASIC2.16□□□□□ -2.06
Sdc1P18828 Gm8880-201ENSMUST00000121800 454 ntBASIC2.16□□□□□ -2.06
Sdc1P18828 Gm15038-201ENSMUST00000122144 296 ntBASIC2.16□□□□□ -2.06
Sdc1P18828 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC2.16□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms