Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Gm37479-201ENSMUST00000194169 3841 ntBASIC4.82□□□□□ -1.64
Msx1P13297 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC4.82□□□□□ -1.64
Msx1P13297 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Msx1P13297 Gm18502-201ENSMUST00000218679 199 ntBASIC4.82□□□□□ -1.64
Msx1P13297 Gm5750-201ENSMUST00000218711 801 ntBASIC4.82□□□□□ -1.64
Msx1P13297 AC122242.1-201ENSMUST00000224650 304 ntBASIC4.82□□□□□ -1.64
Msx1P13297 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC4.82□□□□□ -1.64
Msx1P13297 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Msx1P13297 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC4.82□□□□□ -1.64
Msx1P13297 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Msx1P13297 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Msx1P13297 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Msx1P13297 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Msx1P13297 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Msx1P13297 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Msx1P13297 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Msx1P13297 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Msx1P13297 Olfr1500-202ENSMUST00000214475 2697 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Msx1P13297 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
Msx1P13297 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Msx1P13297 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
Msx1P13297 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Msx1P13297 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
Msx1P13297 Gm43696-201ENSMUST00000199385 6071 ntBASIC4.81□□□□□ -1.64
Msx1P13297 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Msx1P13297 Gm42583-201ENSMUST00000202678 6700 ntBASIC4.81□□□□□ -1.64
Msx1P13297 Gm43010-201ENSMUST00000195993 2878 ntBASIC4.81□□□□□ -1.64
Msx1P13297 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Msx1P13297 Gm14560-201ENSMUST00000118672 375 ntBASIC4.81□□□□□ -1.64
Msx1P13297 Gm12422-201ENSMUST00000121431 302 ntBASIC4.81□□□□□ -1.64
Msx1P13297 n-R5s21-201ENSMUST00000122692 117 ntBASIC4.81□□□□□ -1.64
Msx1P13297 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC4.81□□□□□ -1.64
Msx1P13297 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC4.81□□□□□ -1.64
Msx1P13297 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC4.81□□□□□ -1.64
Msx1P13297 Gm17951-201ENSMUST00000198536 496 ntBASIC4.81□□□□□ -1.64
Msx1P13297 Gm44583-201ENSMUST00000207478 281 ntBASIC4.81□□□□□ -1.64
Msx1P13297 Gm45860-201ENSMUST00000212700 334 ntBASIC4.81□□□□□ -1.64
Msx1P13297 AC140785.1-201ENSMUST00000217782 383 ntBASIC4.81□□□□□ -1.64
Msx1P13297 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC4.81□□□□□ -1.64
Msx1P13297 CT025525.4-201ENSMUST00000227728 277 ntBASIC4.81□□□□□ -1.64
Msx1P13297 Apoo-ps-201ENSMUST00000061241 586 ntBASIC4.81□□□□□ -1.64
Msx1P13297 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Msx1P13297 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Msx1P13297 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Msx1P13297 Gm43024-201ENSMUST00000196770 4352 ntBASIC4.81□□□□□ -1.64
Msx1P13297 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Msx1P13297 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Msx1P13297 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC4.81□□□□□ -1.64
Msx1P13297 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Msx1P13297 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Msx1P13297 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Msx1P13297 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Msx1P13297 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Msx1P13297 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Msx1P13297 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Msx1P13297 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Msx1P13297 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Msx1P13297 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Msx1P13297 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
Msx1P13297 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Msx1P13297 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Msx1P13297 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Msx1P13297 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Msx1P13297 Mir292-201ENSMUST00000104847 82 ntBASIC4.8□□□□□ -1.64
Msx1P13297 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC4.8□□□□□ -1.64
Msx1P13297 Gm17014-201ENSMUST00000120765 168 ntBASIC4.8□□□□□ -1.64
Msx1P13297 Gm14069-201ENSMUST00000120815 229 ntBASIC4.8□□□□□ -1.64
Msx1P13297 Gm11334-201ENSMUST00000121969 156 ntBASIC4.8□□□□□ -1.64
Msx1P13297 n-R5s174-201ENSMUST00000122638 121 ntBASIC4.8□□□□□ -1.64
Msx1P13297 Gm16354-201ENSMUST00000155376 150 ntBASIC4.8□□□□□ -1.64
Msx1P13297 Gm25665-201ENSMUST00000157695 110 ntBASIC4.8□□□□□ -1.64
Msx1P13297 Gm22789-201ENSMUST00000157884 130 ntBASIC4.8□□□□□ -1.64
Msx1P13297 Gm24224-201ENSMUST00000158828 258 ntBASIC4.8□□□□□ -1.64
Msx1P13297 Mir6338-201ENSMUST00000183389 109 ntBASIC4.8□□□□□ -1.64
Msx1P13297 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC4.8□□□□□ -1.64
Msx1P13297 Gm29005-201ENSMUST00000186773 320 ntBASIC4.8□□□□□ -1.64
Msx1P13297 Gm29610-201ENSMUST00000187749 453 ntBASIC4.8□□□□□ -1.64
Msx1P13297 Gm5285-201ENSMUST00000193089 666 ntBASIC4.8□□□□□ -1.64
Msx1P13297 Gm38253-201ENSMUST00000194058 4678 ntBASIC4.8□□□□□ -1.64
Msx1P13297 Gm4321-201ENSMUST00000200520 442 ntBASIC4.8□□□□□ -1.64
Msx1P13297 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC4.8□□□□□ -1.64
Msx1P13297 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC4.8□□□□□ -1.64
Msx1P13297 AC158955.1-201ENSMUST00000227140 385 ntBASIC4.8□□□□□ -1.64
Msx1P13297 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Msx1P13297 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
Msx1P13297 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Msx1P13297 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
Msx1P13297 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Msx1P13297 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
Msx1P13297 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC4.8□□□□□ -1.64
Msx1P13297 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Msx1P13297 Gm37236-201ENSMUST00000193670 3249 ntBASIC4.8□□□□□ -1.64
Msx1P13297 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Msx1P13297 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Msx1P13297 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Msx1P13297 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Msx1P13297 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Msx1P13297 AC122840.2-201ENSMUST00000221030 2659 ntBASIC4.79□□□□□ -1.64
Msx1P13297 Gm25096-201ENSMUST00000104043 129 ntBASIC4.79□□□□□ -1.64
Msx1P13297 Mir872-201ENSMUST00000104728 81 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms