Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 CT030166.1-201ENSMUST00000222654 357 ntBASIC1.84□□□□□ -2.11
Col1a1P11087 AC170086.1-201ENSMUST00000225190 497 ntBASIC1.84□□□□□ -2.11
Col1a1P11087 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Col1a1P11087 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC1.84□□□□□ -2.12
Col1a1P11087 Gm13714-201ENSMUST00000117313 221 ntBASIC1.83□□□□□ -2.12
Col1a1P11087 Gm7123-201ENSMUST00000117647 213 ntBASIC1.83□□□□□ -2.12
Col1a1P11087 Gm22521-201ENSMUST00000158272 134 ntBASIC1.83□□□□□ -2.12
Col1a1P11087 Mir3098-201ENSMUST00000175416 87 ntBASIC1.83□□□□□ -2.12
Col1a1P11087 Gm24863-201ENSMUST00000179499 107 ntBASIC1.83□□□□□ -2.12
Col1a1P11087 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC1.83□□□□□ -2.12
Col1a1P11087 Gm42960-201ENSMUST00000202160 241 ntBASIC1.83□□□□□ -2.12
Col1a1P11087 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC1.83□□□□□ -2.12
Col1a1P11087 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC1.83□□□□□ -2.12
Col1a1P11087 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC1.83□□□□□ -2.12
Col1a1P11087 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC1.83□□□□□ -2.12
Col1a1P11087 AC122418.1-201ENSMUST00000225012 511 ntBASIC1.83□□□□□ -2.12
Col1a1P11087 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Col1a1P11087 n-R5s96-201ENSMUST00000082574 124 ntBASIC1.83□□□□□ -2.12
Col1a1P11087 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Col1a1P11087 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Col1a1P11087 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Col1a1P11087 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
Col1a1P11087 Gm16100-201ENSMUST00000120489 231 ntBASIC1.82□□□□□ -2.12
Col1a1P11087 Gm12880-201ENSMUST00000120652 494 ntBASIC1.82□□□□□ -2.12
Col1a1P11087 Gm14841-201ENSMUST00000121067 758 ntBASIC1.82□□□□□ -2.12
Col1a1P11087 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC1.82□□□□□ -2.12
Col1a1P11087 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Col1a1P11087 Gm24154-201ENSMUST00000175261 130 ntBASIC1.82□□□□□ -2.12
Col1a1P11087 Gm26915-201ENSMUST00000183080 748 ntBASIC1.82□□□□□ -2.12
Col1a1P11087 Mir7052-201ENSMUST00000184821 65 ntBASIC1.82□□□□□ -2.12
Col1a1P11087 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC1.82□□□□□ -2.12
Col1a1P11087 Gm45192-201ENSMUST00000206749 283 ntBASIC1.82□□□□□ -2.12
Col1a1P11087 Gm45689-201ENSMUST00000210522 133 ntBASIC1.82□□□□□ -2.12
Col1a1P11087 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC1.82□□□□□ -2.12
Col1a1P11087 AC132881.2-201ENSMUST00000225474 709 ntBASIC1.82□□□□□ -2.12
Col1a1P11087 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Col1a1P11087 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.82□□□□□ -2.12
Col1a1P11087 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.82□□□□□ -2.12
Col1a1P11087 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC1.82□□□□□ -2.12
Col1a1P11087 Gm24984-201ENSMUST00000104454 133 ntBASIC1.82□□□□□ -2.12
Col1a1P11087 Gm15090-201ENSMUST00000118787 1196 ntBASIC1.82□□□□□ -2.12
Col1a1P11087 Gm15089-201ENSMUST00000122332 1196 ntBASIC1.82□□□□□ -2.12
Col1a1P11087 Gm13901-201ENSMUST00000137252 468 ntBASIC1.82□□□□□ -2.12
Col1a1P11087 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.82□□□□□ -2.12
Col1a1P11087 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Col1a1P11087 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC1.82□□□□□ -2.12
Col1a1P11087 Mup-ps7-201ENSMUST00000178292 545 ntBASIC1.82□□□□□ -2.12
Col1a1P11087 Gm27245-201ENSMUST00000184385 376 ntBASIC1.82□□□□□ -2.12
Col1a1P11087 Mir7059-201ENSMUST00000184825 59 ntBASIC1.82□□□□□ -2.12
Col1a1P11087 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC1.82□□□□□ -2.12
Col1a1P11087 Gm37817-201ENSMUST00000195276 434 ntBASIC1.82□□□□□ -2.12
Col1a1P11087 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
Col1a1P11087 Gm42506-201ENSMUST00000202009 150 ntBASIC1.82□□□□□ -2.12
Col1a1P11087 Gm43991-201ENSMUST00000203751 274 ntBASIC1.82□□□□□ -2.12
Col1a1P11087 Gm45189-201ENSMUST00000208567 363 ntBASIC1.82□□□□□ -2.12
Col1a1P11087 AC153646.1-201ENSMUST00000223229 1279 ntBASIC1.82□□□□□ -2.12
Col1a1P11087 Mir423-201ENSMUST00000083584 109 ntBASIC1.82□□□□□ -2.12
Col1a1P11087 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Col1a1P11087 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC1.82□□□□□ -2.12
Col1a1P11087 Gm18360-201ENSMUST00000173327 1524 ntBASIC1.81□□□□□ -2.12
Col1a1P11087 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Col1a1P11087 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.81□□□□□ -2.12
Col1a1P11087 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Col1a1P11087 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Col1a1P11087 Gm649-201ENSMUST00000117284 1054 ntBASIC1.81□□□□□ -2.12
Col1a1P11087 Gm15282-201ENSMUST00000117707 300 ntBASIC1.81□□□□□ -2.12
Col1a1P11087 Gm26099-201ENSMUST00000157248 109 ntBASIC1.81□□□□□ -2.12
Col1a1P11087 Gm15235-201ENSMUST00000200572 194 ntBASIC1.81□□□□□ -2.12
Col1a1P11087 Gm44061-201ENSMUST00000203962 1195 ntBASIC1.81□□□□□ -2.12
Col1a1P11087 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC1.81□□□□□ -2.12
Col1a1P11087 Gm45273-201ENSMUST00000211559 281 ntBASIC1.81□□□□□ -2.12
Col1a1P11087 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Col1a1P11087 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Col1a1P11087 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Col1a1P11087 Gm26473-201ENSMUST00000116763 127 ntBASIC1.8□□□□□ -2.12
Col1a1P11087 Gm2066-201ENSMUST00000118046 389 ntBASIC1.8□□□□□ -2.12
Col1a1P11087 Gm2318-201ENSMUST00000119623 639 ntBASIC1.8□□□□□ -2.12
Col1a1P11087 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Col1a1P11087 Gm2005-201ENSMUST00000120759 542 ntBASIC1.8□□□□□ -2.12
Col1a1P11087 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC1.8□□□□□ -2.12
Col1a1P11087 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Col1a1P11087 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Col1a1P11087 Gm23813-201ENSMUST00000175153 77 ntBASIC1.8□□□□□ -2.12
Col1a1P11087 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Col1a1P11087 Gm7438-201ENSMUST00000177664 639 ntBASIC1.8□□□□□ -2.12
Col1a1P11087 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Col1a1P11087 Gm7408-201ENSMUST00000178014 639 ntBASIC1.8□□□□□ -2.12
Col1a1P11087 Gm7386-201ENSMUST00000178020 639 ntBASIC1.8□□□□□ -2.12
Col1a1P11087 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Col1a1P11087 Gm3657-201ENSMUST00000178170 639 ntBASIC1.8□□□□□ -2.12
Col1a1P11087 Gm7415-201ENSMUST00000178205 639 ntBASIC1.8□□□□□ -2.12
Col1a1P11087 Gm7398-201ENSMUST00000178589 639 ntBASIC1.8□□□□□ -2.12
Col1a1P11087 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Col1a1P11087 Gm7391-201ENSMUST00000178680 639 ntBASIC1.8□□□□□ -2.12
Col1a1P11087 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Col1a1P11087 Gm2092-201ENSMUST00000178887 639 ntBASIC1.8□□□□□ -2.12
Col1a1P11087 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Col1a1P11087 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Col1a1P11087 Gm7375-201ENSMUST00000179232 639 ntBASIC1.8□□□□□ -2.12
Col1a1P11087 Gm2759-201ENSMUST00000179938 639 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms