Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Vti1aO89116 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
Vti1aO89116 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC4.54□□□□□ -1.68
Vti1aO89116 Gm43047-201ENSMUST00000200089 3460 ntBASIC4.54□□□□□ -1.68
Vti1aO89116 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Vti1aO89116 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC4.54□□□□□ -1.68
Vti1aO89116 AC156025.1-201ENSMUST00000223597 3551 ntBASIC4.54□□□□□ -1.68
Vti1aO89116 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC4.54□□□□□ -1.68
Vti1aO89116 Gm42639-201ENSMUST00000197061 1871 ntBASIC4.54□□□□□ -1.68
Vti1aO89116 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC4.54□□□□□ -1.68
Vti1aO89116 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Vti1aO89116 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Vti1aO89116 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Vti1aO89116 Gm28362-201ENSMUST00000189430 2420 ntBASIC4.53□□□□□ -1.68
Vti1aO89116 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
Vti1aO89116 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Vti1aO89116 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
Vti1aO89116 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Vti1aO89116 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
Vti1aO89116 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Vti1aO89116 Gm11931-201ENSMUST00000121630 447 ntBASIC4.53□□□□□ -1.68
Vti1aO89116 Gm22453-201ENSMUST00000122801 318 ntBASIC4.53□□□□□ -1.68
Vti1aO89116 Gm8289-201ENSMUST00000144814 1182 ntBASIC4.53□□□□□ -1.68
Vti1aO89116 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Vti1aO89116 Gm24666-201ENSMUST00000158937 167 ntBASIC4.53□□□□□ -1.68
Vti1aO89116 Gm23215-201ENSMUST00000178153 121 ntBASIC4.53□□□□□ -1.68
Vti1aO89116 Mir8106-201ENSMUST00000184520 139 ntBASIC4.53□□□□□ -1.68
Vti1aO89116 Ighv1-32-201ENSMUST00000195149 351 ntBASIC4.53□□□□□ -1.68
Vti1aO89116 Gm34073-201ENSMUST00000195736 212 ntBASIC4.53□□□□□ -1.68
Vti1aO89116 Gm44354-201ENSMUST00000196017 143 ntBASIC4.53□□□□□ -1.68
Vti1aO89116 Gm43829-201ENSMUST00000196191 3802 ntBASIC4.53□□□□□ -1.68
Vti1aO89116 Gm19908-201ENSMUST00000204684 391 ntBASIC4.53□□□□□ -1.68
Vti1aO89116 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC4.53□□□□□ -1.68
Vti1aO89116 AC154276.2-201ENSMUST00000227707 309 ntBASIC4.53□□□□□ -1.68
Vti1aO89116 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Vti1aO89116 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Vti1aO89116 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Vti1aO89116 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
Vti1aO89116 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC4.53□□□□□ -1.68
Vti1aO89116 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Vti1aO89116 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Vti1aO89116 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Vti1aO89116 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Vti1aO89116 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Vti1aO89116 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Vti1aO89116 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Vti1aO89116 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Vti1aO89116 Mir687-201ENSMUST00000102166 89 ntBASIC4.52□□□□□ -1.69
Vti1aO89116 Mir466b-8-201ENSMUST00000103883 86 ntBASIC4.52□□□□□ -1.69
Vti1aO89116 Gm23319-201ENSMUST00000104467 131 ntBASIC4.52□□□□□ -1.69
Vti1aO89116 Gm22496-201ENSMUST00000104493 88 ntBASIC4.52□□□□□ -1.69
Vti1aO89116 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Vti1aO89116 Gm11874-201ENSMUST00000117437 130 ntBASIC4.52□□□□□ -1.69
Vti1aO89116 Gm14107-201ENSMUST00000117774 330 ntBASIC4.52□□□□□ -1.69
Vti1aO89116 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC4.52□□□□□ -1.69
Vti1aO89116 Gm4761-201ENSMUST00000178086 582 ntBASIC4.52□□□□□ -1.69
Vti1aO89116 Gm25175-201ENSMUST00000178712 79 ntBASIC4.52□□□□□ -1.69
Vti1aO89116 Gm27695-201ENSMUST00000184301 91 ntBASIC4.52□□□□□ -1.69
Vti1aO89116 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC4.52□□□□□ -1.69
Vti1aO89116 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Vti1aO89116 Gm7837-201ENSMUST00000190873 412 ntBASIC4.52□□□□□ -1.69
Vti1aO89116 Mir129b-201ENSMUST00000197461 65 ntBASIC4.52□□□□□ -1.69
Vti1aO89116 Gm42621-201ENSMUST00000198114 275 ntBASIC4.52□□□□□ -1.69
Vti1aO89116 Mir466e-201ENSMUST00000198862 84 ntBASIC4.52□□□□□ -1.69
Vti1aO89116 Mir466c-1-201ENSMUST00000200654 84 ntBASIC4.52□□□□□ -1.69
Vti1aO89116 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC4.52□□□□□ -1.69
Vti1aO89116 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC4.52□□□□□ -1.69
Vti1aO89116 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
Vti1aO89116 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Vti1aO89116 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC4.52□□□□□ -1.69
Vti1aO89116 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
Vti1aO89116 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Vti1aO89116 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Vti1aO89116 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Vti1aO89116 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Vti1aO89116 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC4.51□□□□□ -1.69
Vti1aO89116 Gm43009-201ENSMUST00000199979 3566 ntBASIC4.51□□□□□ -1.69
Vti1aO89116 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Vti1aO89116 Gm37747-201ENSMUST00000193717 4003 ntBASIC4.51□□□□□ -1.69
Vti1aO89116 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Vti1aO89116 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Vti1aO89116 Gm23941-201ENSMUST00000101953 107 ntBASIC4.51□□□□□ -1.69
Vti1aO89116 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Vti1aO89116 Gm14714-201ENSMUST00000119743 439 ntBASIC4.51□□□□□ -1.69
Vti1aO89116 Gm13903-201ENSMUST00000120945 193 ntBASIC4.51□□□□□ -1.69
Vti1aO89116 Gm15263-201ENSMUST00000121556 642 ntBASIC4.51□□□□□ -1.69
Vti1aO89116 Gm12785-201ENSMUST00000122052 172 ntBASIC4.51□□□□□ -1.69
Vti1aO89116 Gm15212-201ENSMUST00000122403 466 ntBASIC4.51□□□□□ -1.69
Vti1aO89116 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC4.51□□□□□ -1.69
Vti1aO89116 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Vti1aO89116 Gm6058-201ENSMUST00000154261 399 ntBASIC4.51□□□□□ -1.69
Vti1aO89116 Gm22839-201ENSMUST00000158436 304 ntBASIC4.51□□□□□ -1.69
Vti1aO89116 Gm29397-201ENSMUST00000185205 333 ntBASIC4.51□□□□□ -1.69
Vti1aO89116 Gm29512-201ENSMUST00000185544 315 ntBASIC4.51□□□□□ -1.69
Vti1aO89116 Gm28110-201ENSMUST00000185782 315 ntBASIC4.51□□□□□ -1.69
Vti1aO89116 Gm28838-201ENSMUST00000186338 315 ntBASIC4.51□□□□□ -1.69
Vti1aO89116 Gm29057-201ENSMUST00000186468 315 ntBASIC4.51□□□□□ -1.69
Vti1aO89116 Gm29661-201ENSMUST00000186781 315 ntBASIC4.51□□□□□ -1.69
Vti1aO89116 Gm28737-201ENSMUST00000186808 315 ntBASIC4.51□□□□□ -1.69
Vti1aO89116 Gm29118-201ENSMUST00000186908 315 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms