Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm28356-202ENSMUST00000187566 858 ntBASIC1.98□□□□□ -2.09
Col5a1O88207 Gm29460-201ENSMUST00000188607 714 ntBASIC1.98□□□□□ -2.09
Col5a1O88207 Gm28155-201ENSMUST00000191066 151 ntBASIC1.98□□□□□ -2.09
Col5a1O88207 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC1.98□□□□□ -2.09
Col5a1O88207 Gm43848-201ENSMUST00000198060 1247 ntBASIC1.98□□□□□ -2.09
Col5a1O88207 Gm44404-201ENSMUST00000203979 636 ntBASIC1.98□□□□□ -2.09
Col5a1O88207 Gm19237-201ENSMUST00000205036 1132 ntBASIC1.98□□□□□ -2.09
Col5a1O88207 AC120394.1-201ENSMUST00000217153 351 ntBASIC1.98□□□□□ -2.09
Col5a1O88207 AC154552.5-201ENSMUST00000222352 207 ntBASIC1.98□□□□□ -2.09
Col5a1O88207 Mir421-201ENSMUST00000083575 76 ntBASIC1.98□□□□□ -2.09
Col5a1O88207 Gm22723-201ENSMUST00000083820 129 ntBASIC1.98□□□□□ -2.09
Col5a1O88207 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Col5a1O88207 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Col5a1O88207 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Col5a1O88207 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Col5a1O88207 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
Col5a1O88207 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
Col5a1O88207 Gm13614-201ENSMUST00000117306 503 ntBASIC1.98□□□□□ -2.09
Col5a1O88207 Gm15312-201ENSMUST00000118827 271 ntBASIC1.98□□□□□ -2.09
Col5a1O88207 Gm15183-201ENSMUST00000118933 348 ntBASIC1.98□□□□□ -2.09
Col5a1O88207 Gm11407-201ENSMUST00000120362 1058 ntBASIC1.98□□□□□ -2.09
Col5a1O88207 Gm15309-201ENSMUST00000121644 240 ntBASIC1.98□□□□□ -2.09
Col5a1O88207 Gm11344-201ENSMUST00000122011 335 ntBASIC1.98□□□□□ -2.09
Col5a1O88207 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Col5a1O88207 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.98□□□□□ -2.09
Col5a1O88207 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.98□□□□□ -2.09
Col5a1O88207 Gm24475-201ENSMUST00000157435 143 ntBASIC1.98□□□□□ -2.09
Col5a1O88207 Gm25606-201ENSMUST00000158363 95 ntBASIC1.98□□□□□ -2.09
Col5a1O88207 Gm24769-201ENSMUST00000158506 129 ntBASIC1.98□□□□□ -2.09
Col5a1O88207 Spanxn4-201ENSMUST00000172433 424 ntBASIC1.98□□□□□ -2.09
Col5a1O88207 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC1.98□□□□□ -2.09
Col5a1O88207 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Col5a1O88207 Gm29281-201ENSMUST00000188077 381 ntBASIC1.98□□□□□ -2.09
Col5a1O88207 Gm36974-201ENSMUST00000194200 1071 ntBASIC1.98□□□□□ -2.09
Col5a1O88207 Gm37576-201ENSMUST00000194228 372 ntBASIC1.98□□□□□ -2.09
Col5a1O88207 Gm17935-201ENSMUST00000196649 772 ntBASIC1.98□□□□□ -2.09
Col5a1O88207 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC1.98□□□□□ -2.09
Col5a1O88207 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Col5a1O88207 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC1.98□□□□□ -2.09
Col5a1O88207 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC1.98□□□□□ -2.09
Col5a1O88207 AC144733.1-201ENSMUST00000222893 1289 ntBASIC1.98□□□□□ -2.09
Col5a1O88207 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Col5a1O88207 Gm23628-201ENSMUST00000082464 173 ntBASIC1.98□□□□□ -2.09
Col5a1O88207 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Col5a1O88207 Gm6913-201ENSMUST00000100019 348 ntBASIC1.97□□□□□ -2.09
Col5a1O88207 Mir582-201ENSMUST00000103758 81 ntBASIC1.97□□□□□ -2.09
Col5a1O88207 Gm15126-201ENSMUST00000118631 833 ntBASIC1.97□□□□□ -2.09
Col5a1O88207 Gm20689-201ENSMUST00000176033 279 ntBASIC1.97□□□□□ -2.09
Col5a1O88207 Gm21809-201ENSMUST00000178495 468 ntBASIC1.97□□□□□ -2.09
Col5a1O88207 Gm29073-201ENSMUST00000185563 664 ntBASIC1.97□□□□□ -2.09
Col5a1O88207 Gm17929-201ENSMUST00000186851 627 ntBASIC1.97□□□□□ -2.09
Col5a1O88207 Gm29165-201ENSMUST00000190655 664 ntBASIC1.97□□□□□ -2.09
Col5a1O88207 Gm29524-201ENSMUST00000190819 699 ntBASIC1.97□□□□□ -2.09
Col5a1O88207 Gm29211-201ENSMUST00000191470 664 ntBASIC1.97□□□□□ -2.09
Col5a1O88207 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Col5a1O88207 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC1.97□□□□□ -2.09
Col5a1O88207 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC1.97□□□□□ -2.09
Col5a1O88207 AC157570.3-201ENSMUST00000219281 205 ntBASIC1.97□□□□□ -2.09
Col5a1O88207 AC122465.3-201ENSMUST00000221644 355 ntBASIC1.97□□□□□ -2.09
Col5a1O88207 CT030166.1-201ENSMUST00000222654 357 ntBASIC1.97□□□□□ -2.09
Col5a1O88207 AC154257.2-201ENSMUST00000224166 340 ntBASIC1.97□□□□□ -2.09
Col5a1O88207 AC167192.1-201ENSMUST00000225908 139 ntBASIC1.97□□□□□ -2.09
Col5a1O88207 AC130823.2-201ENSMUST00000226169 290 ntBASIC1.97□□□□□ -2.09
Col5a1O88207 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Col5a1O88207 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Col5a1O88207 Gm22245-201ENSMUST00000082479 103 ntBASIC1.97□□□□□ -2.09
Col5a1O88207 Gm24921-201ENSMUST00000083024 107 ntBASIC1.97□□□□□ -2.09
Col5a1O88207 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
Col5a1O88207 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
Col5a1O88207 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
Col5a1O88207 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.96□□□□□ -2.1
Col5a1O88207 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Col5a1O88207 Gm23792-201ENSMUST00000122557 93 ntBASIC1.96□□□□□ -2.1
Col5a1O88207 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC1.96□□□□□ -2.1
Col5a1O88207 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Col5a1O88207 Gm7846-201ENSMUST00000145844 274 ntBASIC1.96□□□□□ -2.1
Col5a1O88207 Gm6182-201ENSMUST00000156439 1208 ntBASIC1.96□□□□□ -2.1
Col5a1O88207 Gm26024-201ENSMUST00000158657 322 ntBASIC1.96□□□□□ -2.1
Col5a1O88207 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Col5a1O88207 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC1.96□□□□□ -2.1
Col5a1O88207 Mup-ps7-201ENSMUST00000178292 545 ntBASIC1.96□□□□□ -2.1
Col5a1O88207 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Col5a1O88207 Mup-ps8-201ENSMUST00000178663 545 ntBASIC1.96□□□□□ -2.1
Col5a1O88207 Mup-ps9-201ENSMUST00000178847 545 ntBASIC1.96□□□□□ -2.1
Col5a1O88207 Mup-ps6-201ENSMUST00000179564 545 ntBASIC1.96□□□□□ -2.1
Col5a1O88207 Mir8118-201ENSMUST00000183962 129 ntBASIC1.96□□□□□ -2.1
Col5a1O88207 Mir6238-201ENSMUST00000184140 129 ntBASIC1.96□□□□□ -2.1
Col5a1O88207 Gm28399-201ENSMUST00000186221 318 ntBASIC1.96□□□□□ -2.1
Col5a1O88207 Gm28572-201ENSMUST00000187444 318 ntBASIC1.96□□□□□ -2.1
Col5a1O88207 Gm37550-201ENSMUST00000193230 463 ntBASIC1.96□□□□□ -2.1
Col5a1O88207 Trbv18-201ENSMUST00000194256 294 ntBASIC1.96□□□□□ -2.1
Col5a1O88207 Gm42474-201ENSMUST00000201073 505 ntBASIC1.96□□□□□ -2.1
Col5a1O88207 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC1.96□□□□□ -2.1
Col5a1O88207 Gm45063-201ENSMUST00000203726 472 ntBASIC1.96□□□□□ -2.1
Col5a1O88207 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC1.96□□□□□ -2.1
Col5a1O88207 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.96□□□□□ -2.1
Col5a1O88207 CT009550.5-201ENSMUST00000226286 382 ntBASIC1.96□□□□□ -2.1
Col5a1O88207 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC1.96□□□□□ -2.1
Col5a1O88207 Mir463-201ENSMUST00000093570 75 ntBASIC1.96□□□□□ -2.1
Col5a1O88207 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 90 ms