Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
Abca4O35600 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC1.4□□□□□ -2.19
Abca4O35600 CT030166.3-201ENSMUST00000223203 193 ntBASIC1.4□□□□□ -2.19
Abca4O35600 AC241593.1-201ENSMUST00000224768 397 ntBASIC1.4□□□□□ -2.19
Abca4O35600 Gm26176-201ENSMUST00000083795 105 ntBASIC1.4□□□□□ -2.19
Abca4O35600 Gm37879-201ENSMUST00000193112 1995 ntBASIC1.39□□□□□ -2.19
Abca4O35600 Gm12448-201ENSMUST00000118852 655 ntBASIC1.39□□□□□ -2.19
Abca4O35600 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC1.39□□□□□ -2.19
Abca4O35600 Gm25312-201ENSMUST00000178972 107 ntBASIC1.39□□□□□ -2.19
Abca4O35600 Mir7663-201ENSMUST00000183950 61 ntBASIC1.39□□□□□ -2.19
Abca4O35600 Gm18341-201ENSMUST00000197538 622 ntBASIC1.39□□□□□ -2.19
Abca4O35600 Gm43510-201ENSMUST00000197922 353 ntBASIC1.39□□□□□ -2.19
Abca4O35600 Gm24541-201ENSMUST00000103871 96 ntBASIC1.39□□□□□ -2.19
Abca4O35600 Gm13194-201ENSMUST00000142299 311 ntBASIC1.39□□□□□ -2.19
Abca4O35600 Gm26099-201ENSMUST00000157248 109 ntBASIC1.39□□□□□ -2.19
Abca4O35600 Gm23221-201ENSMUST00000158118 93 ntBASIC1.39□□□□□ -2.19
Abca4O35600 Gm23505-201ENSMUST00000158989 130 ntBASIC1.39□□□□□ -2.19
Abca4O35600 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.39□□□□□ -2.19
Abca4O35600 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
Abca4O35600 Gm6788-201ENSMUST00000166459 270 ntBASIC1.38□□□□□ -2.19
Abca4O35600 Mir6540-201ENSMUST00000184886 108 ntBASIC1.38□□□□□ -2.19
Abca4O35600 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
Abca4O35600 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC1.38□□□□□ -2.19
Abca4O35600 CT025606.1-201ENSMUST00000218273 324 ntBASIC1.38□□□□□ -2.19
Abca4O35600 AC144628.2-201ENSMUST00000227374 352 ntBASIC1.38□□□□□ -2.19
Abca4O35600 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Abca4O35600 Gm23126-201ENSMUST00000104260 134 ntBASIC1.38□□□□□ -2.19
Abca4O35600 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
Abca4O35600 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC1.38□□□□□ -2.19
Abca4O35600 Gm18546-201ENSMUST00000197245 676 ntBASIC1.38□□□□□ -2.19
Abca4O35600 Gm15235-201ENSMUST00000200572 194 ntBASIC1.38□□□□□ -2.19
Abca4O35600 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
Abca4O35600 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC1.37□□□□□ -2.19
Abca4O35600 Gm12386-201ENSMUST00000117380 688 ntBASIC1.37□□□□□ -2.19
Abca4O35600 Gm12934-201ENSMUST00000119221 343 ntBASIC1.37□□□□□ -2.19
Abca4O35600 Gm13913-201ENSMUST00000121126 260 ntBASIC1.37□□□□□ -2.19
Abca4O35600 Gm15116-201ENSMUST00000122248 663 ntBASIC1.37□□□□□ -2.19
Abca4O35600 Gm22478-201ENSMUST00000122570 154 ntBASIC1.37□□□□□ -2.19
Abca4O35600 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC1.37□□□□□ -2.19
Abca4O35600 Gm23033-201ENSMUST00000157996 134 ntBASIC1.37□□□□□ -2.19
Abca4O35600 Gm27427-201ENSMUST00000185134 193 ntBASIC1.37□□□□□ -2.19
Abca4O35600 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC1.37□□□□□ -2.19
Abca4O35600 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC1.37□□□□□ -2.19
Abca4O35600 Gm45268-201ENSMUST00000210046 370 ntBASIC1.37□□□□□ -2.19
Abca4O35600 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC1.37□□□□□ -2.19
Abca4O35600 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
Abca4O35600 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
Abca4O35600 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC1.37□□□□□ -2.19
Abca4O35600 AC157570.1-201ENSMUST00000218052 3778 ntBASIC1.37□□□□□ -2.19
Abca4O35600 Gm43404-201ENSMUST00000200424 2534 ntBASIC1.37□□□□□ -2.19
Abca4O35600 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
Abca4O35600 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC1.37□□□□□ -2.19
Abca4O35600 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC1.37□□□□□ -2.19
Abca4O35600 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.37□□□□□ -2.19
Abca4O35600 Gm44061-201ENSMUST00000203962 1195 ntBASIC1.37□□□□□ -2.19
Abca4O35600 Gm25796-201ENSMUST00000082645 163 ntBASIC1.37□□□□□ -2.19
Abca4O35600 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
Abca4O35600 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
Abca4O35600 Gm12587-201ENSMUST00000120180 427 ntBASIC1.36□□□□□ -2.19
Abca4O35600 Gm25166-201ENSMUST00000158909 111 ntBASIC1.36□□□□□ -2.19
Abca4O35600 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
Abca4O35600 Gm6801-201ENSMUST00000190697 339 ntBASIC1.36□□□□□ -2.19
Abca4O35600 Gm43865-201ENSMUST00000204721 127 ntBASIC1.36□□□□□ -2.19
Abca4O35600 Gm29809-201ENSMUST00000218423 493 ntBASIC1.36□□□□□ -2.19
Abca4O35600 AC122465.2-201ENSMUST00000221774 354 ntBASIC1.36□□□□□ -2.19
Abca4O35600 AC155167.3-201ENSMUST00000226349 217 ntBASIC1.36□□□□□ -2.19
Abca4O35600 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.36□□□□□ -2.19
Abca4O35600 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC1.36□□□□□ -2.19
Abca4O35600 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
Abca4O35600 Gm25497-201ENSMUST00000104425 132 ntBASIC1.35□□□□□ -2.19
Abca4O35600 Gm25495-201ENSMUST00000104431 131 ntBASIC1.35□□□□□ -2.19
Abca4O35600 Mir290a-201ENSMUST00000104627 83 ntBASIC1.35□□□□□ -2.19
Abca4O35600 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC1.35□□□□□ -2.19
Abca4O35600 Snora24-201ENSMUST00000174989 130 ntBASIC1.35□□□□□ -2.19
Abca4O35600 Gm25633-201ENSMUST00000178565 107 ntBASIC1.35□□□□□ -2.19
Abca4O35600 Gm20561-201ENSMUST00000188131 292 ntBASIC1.35□□□□□ -2.19
Abca4O35600 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC1.35□□□□□ -2.19
Abca4O35600 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC1.35□□□□□ -2.19
Abca4O35600 AC102575.1-201ENSMUST00000225348 547 ntBASIC1.35□□□□□ -2.19
Abca4O35600 AC131100.2-201ENSMUST00000227701 998 ntBASIC1.35□□□□□ -2.19
Abca4O35600 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
Abca4O35600 Gm23558-201ENSMUST00000157823 80 ntBASIC1.35□□□□□ -2.19
Abca4O35600 Gm25606-201ENSMUST00000158363 95 ntBASIC1.35□□□□□ -2.19
Abca4O35600 Gm3851-201ENSMUST00000168653 318 ntBASIC1.35□□□□□ -2.19
Abca4O35600 Gm20648-201ENSMUST00000175815 328 ntBASIC1.35□□□□□ -2.19
Abca4O35600 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
Abca4O35600 Gm29604-201ENSMUST00000187176 163 ntBASIC1.35□□□□□ -2.19
Abca4O35600 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
Abca4O35600 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC1.35□□□□□ -2.19
Abca4O35600 Gm20948-201ENSMUST00000211091 449 ntBASIC1.35□□□□□ -2.19
Abca4O35600 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC1.35□□□□□ -2.19
Abca4O35600 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
Abca4O35600 Gm24252-201ENSMUST00000083700 132 ntBASIC1.35□□□□□ -2.19
Abca4O35600 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.35□□□□□ -2.19
Abca4O35600 Gm38104-201ENSMUST00000195121 1895 ntBASIC1.35□□□□□ -2.19
Abca4O35600 Gm9440-201ENSMUST00000119667 539 ntBASIC1.34□□□□□ -2.19
Abca4O35600 Gm25279-201ENSMUST00000122608 133 ntBASIC1.34□□□□□ -2.19
Abca4O35600 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
Abca4O35600 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
Abca4O35600 Gm26414-201ENSMUST00000157674 269 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms