Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
Pcdh1F7BJK1 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
Pcdh1F7BJK1 Gm42717-201ENSMUST00000197309 3463 ntBASIC3.91□□□□□ -1.78
Pcdh1F7BJK1 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Pcdh1F7BJK1 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Pcdh1F7BJK1 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
Pcdh1F7BJK1 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Pcdh1F7BJK1 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC3.91□□□□□ -1.78
Pcdh1F7BJK1 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
Pcdh1F7BJK1 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
Pcdh1F7BJK1 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Pcdh1F7BJK1 AC164297.1-201ENSMUST00000224484 1561 ntBASIC3.9□□□□□ -1.78
Pcdh1F7BJK1 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Pcdh1F7BJK1 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Pcdh1F7BJK1 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC3.9□□□□□ -1.79
Pcdh1F7BJK1 Gm42486-201ENSMUST00000200369 3486 ntBASIC3.9□□□□□ -1.79
Pcdh1F7BJK1 Gm22496-201ENSMUST00000104493 88 ntBASIC3.9□□□□□ -1.79
Pcdh1F7BJK1 Gm22899-201ENSMUST00000104540 131 ntBASIC3.9□□□□□ -1.79
Pcdh1F7BJK1 Gm15026-201ENSMUST00000119219 458 ntBASIC3.9□□□□□ -1.79
Pcdh1F7BJK1 Gm14581-201ENSMUST00000121726 198 ntBASIC3.9□□□□□ -1.79
Pcdh1F7BJK1 Gm8289-201ENSMUST00000144814 1182 ntBASIC3.9□□□□□ -1.79
Pcdh1F7BJK1 Gm25283-201ENSMUST00000157272 77 ntBASIC3.9□□□□□ -1.79
Pcdh1F7BJK1 Gm22328-201ENSMUST00000158074 112 ntBASIC3.9□□□□□ -1.79
Pcdh1F7BJK1 Gm23546-201ENSMUST00000158211 137 ntBASIC3.9□□□□□ -1.79
Pcdh1F7BJK1 Gm25749-201ENSMUST00000175485 111 ntBASIC3.9□□□□□ -1.79
Pcdh1F7BJK1 Gm20630-201ENSMUST00000177387 551 ntBASIC3.9□□□□□ -1.79
Pcdh1F7BJK1 Gm25175-201ENSMUST00000178712 79 ntBASIC3.9□□□□□ -1.79
Pcdh1F7BJK1 Gm28339-201ENSMUST00000185845 696 ntBASIC3.9□□□□□ -1.79
Pcdh1F7BJK1 Gm28471-201ENSMUST00000185994 615 ntBASIC3.9□□□□□ -1.79
Pcdh1F7BJK1 Gm28598-201ENSMUST00000186490 615 ntBASIC3.9□□□□□ -1.79
Pcdh1F7BJK1 Gm28057-201ENSMUST00000186603 615 ntBASIC3.9□□□□□ -1.79
Pcdh1F7BJK1 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC3.9□□□□□ -1.79
Pcdh1F7BJK1 Gm28896-201ENSMUST00000188609 696 ntBASIC3.9□□□□□ -1.79
Pcdh1F7BJK1 Gm29268-201ENSMUST00000188669 615 ntBASIC3.9□□□□□ -1.79
Pcdh1F7BJK1 Gm28978-201ENSMUST00000191120 615 ntBASIC3.9□□□□□ -1.79
Pcdh1F7BJK1 Gm37172-201ENSMUST00000191926 615 ntBASIC3.9□□□□□ -1.79
Pcdh1F7BJK1 Gm8599-201ENSMUST00000193033 457 ntBASIC3.9□□□□□ -1.79
Pcdh1F7BJK1 Gm38107-201ENSMUST00000194873 696 ntBASIC3.9□□□□□ -1.79
Pcdh1F7BJK1 Gm44881-201ENSMUST00000205425 367 ntBASIC3.9□□□□□ -1.79
Pcdh1F7BJK1 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Pcdh1F7BJK1 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Pcdh1F7BJK1 Gm22358-201ENSMUST00000082877 122 ntBASIC3.9□□□□□ -1.79
Pcdh1F7BJK1 Gm25188-201ENSMUST00000083913 122 ntBASIC3.9□□□□□ -1.79
Pcdh1F7BJK1 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
Pcdh1F7BJK1 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
Pcdh1F7BJK1 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
Pcdh1F7BJK1 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
Pcdh1F7BJK1 Gm12010-201ENSMUST00000122400 2017 ntBASIC3.9□□□□□ -1.79
Pcdh1F7BJK1 Gm43663-201ENSMUST00000198643 1505 ntBASIC3.9□□□□□ -1.79
Pcdh1F7BJK1 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Pcdh1F7BJK1 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Pcdh1F7BJK1 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Pcdh1F7BJK1 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
Pcdh1F7BJK1 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
Pcdh1F7BJK1 Gm37625-201ENSMUST00000194969 4872 ntBASIC3.89□□□□□ -1.79
Pcdh1F7BJK1 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC3.89□□□□□ -1.79
Pcdh1F7BJK1 Gm36969-201ENSMUST00000194551 2809 ntBASIC3.89□□□□□ -1.79
Pcdh1F7BJK1 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC3.89□□□□□ -1.79
Pcdh1F7BJK1 Gm23836-201ENSMUST00000104434 129 ntBASIC3.89□□□□□ -1.79
Pcdh1F7BJK1 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC3.89□□□□□ -1.79
Pcdh1F7BJK1 Gm27510-201ENSMUST00000158214 64 ntBASIC3.89□□□□□ -1.79
Pcdh1F7BJK1 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Pcdh1F7BJK1 Gm17159-201ENSMUST00000169043 482 ntBASIC3.89□□□□□ -1.79
Pcdh1F7BJK1 Mir5103-201ENSMUST00000175111 79 ntBASIC3.89□□□□□ -1.79
Pcdh1F7BJK1 Gm25534-201ENSMUST00000175365 125 ntBASIC3.89□□□□□ -1.79
Pcdh1F7BJK1 Gm20660-201ENSMUST00000177515 289 ntBASIC3.89□□□□□ -1.79
Pcdh1F7BJK1 Mir7056-201ENSMUST00000183776 59 ntBASIC3.89□□□□□ -1.79
Pcdh1F7BJK1 Mir1957b-201ENSMUST00000184608 123 ntBASIC3.89□□□□□ -1.79
Pcdh1F7BJK1 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC3.89□□□□□ -1.79
Pcdh1F7BJK1 Gm20257-202ENSMUST00000188643 130 ntBASIC3.89□□□□□ -1.79
Pcdh1F7BJK1 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC3.89□□□□□ -1.79
Pcdh1F7BJK1 Gm29218-205ENSMUST00000190846 615 ntBASIC3.89□□□□□ -1.79
Pcdh1F7BJK1 Gm44322-201ENSMUST00000196830 115 ntBASIC3.89□□□□□ -1.79
Pcdh1F7BJK1 Gm43524-201ENSMUST00000197278 298 ntBASIC3.89□□□□□ -1.79
Pcdh1F7BJK1 Gm7652-201ENSMUST00000200440 1151 ntBASIC3.89□□□□□ -1.79
Pcdh1F7BJK1 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC3.89□□□□□ -1.79
Pcdh1F7BJK1 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC3.89□□□□□ -1.79
Pcdh1F7BJK1 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC3.89□□□□□ -1.79
Pcdh1F7BJK1 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Pcdh1F7BJK1 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC3.89□□□□□ -1.79
Pcdh1F7BJK1 CT009711.3-201ENSMUST00000225882 250 ntBASIC3.89□□□□□ -1.79
Pcdh1F7BJK1 AC154626.1-201ENSMUST00000226070 311 ntBASIC3.89□□□□□ -1.79
Pcdh1F7BJK1 AC101945.3-201ENSMUST00000226568 153 ntBASIC3.89□□□□□ -1.79
Pcdh1F7BJK1 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC3.89□□□□□ -1.79
Pcdh1F7BJK1 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Pcdh1F7BJK1 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Pcdh1F7BJK1 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Pcdh1F7BJK1 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Pcdh1F7BJK1 Gm45131-201ENSMUST00000208051 2582 ntBASIC3.89□□□□□ -1.79
Pcdh1F7BJK1 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
Pcdh1F7BJK1 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Pcdh1F7BJK1 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Pcdh1F7BJK1 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Pcdh1F7BJK1 Gm44438-201ENSMUST00000204388 3236 ntBASIC3.88□□□□□ -1.79
Pcdh1F7BJK1 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC3.88□□□□□ -1.79
Pcdh1F7BJK1 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Pcdh1F7BJK1 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC3.88□□□□□ -1.79
Pcdh1F7BJK1 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC3.88□□□□□ -1.79
Pcdh1F7BJK1 Gm22472-201ENSMUST00000104115 134 ntBASIC3.88□□□□□ -1.79
Pcdh1F7BJK1 Gm15206-201ENSMUST00000119143 454 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms