Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Col6a3E9PWQ3 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Col6a3E9PWQ3 Gm5929-201ENSMUST00000166883 487 ntBASIC1.38□□□□□ -2.19
Col6a3E9PWQ3 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC1.38□□□□□ -2.19
Col6a3E9PWQ3 Gm3690-201ENSMUST00000211341 262 ntBASIC1.38□□□□□ -2.19
Col6a3E9PWQ3 Gm20948-201ENSMUST00000211091 449 ntBASIC1.38□□□□□ -2.19
Col6a3E9PWQ3 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
Col6a3E9PWQ3 Gm29288-201ENSMUST00000191582 901 ntBASIC1.37□□□□□ -2.19
Col6a3E9PWQ3 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
Col6a3E9PWQ3 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
Col6a3E9PWQ3 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
Col6a3E9PWQ3 Gm26358-201ENSMUST00000158215 97 ntBASIC1.37□□□□□ -2.19
Col6a3E9PWQ3 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC1.37□□□□□ -2.19
Col6a3E9PWQ3 Gm26435-201ENSMUST00000179026 107 ntBASIC1.37□□□□□ -2.19
Col6a3E9PWQ3 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
Col6a3E9PWQ3 Gm29600-201ENSMUST00000188687 377 ntBASIC1.37□□□□□ -2.19
Col6a3E9PWQ3 CT010454.1-201ENSMUST00000225975 265 ntBASIC1.37□□□□□ -2.19
Col6a3E9PWQ3 Gm42448-201ENSMUST00000197122 2644 ntBASIC1.37□□□□□ -2.19
Col6a3E9PWQ3 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC1.37□□□□□ -2.19
Col6a3E9PWQ3 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
Col6a3E9PWQ3 Gm12448-201ENSMUST00000118852 655 ntBASIC1.37□□□□□ -2.19
Col6a3E9PWQ3 Gm13577-201ENSMUST00000121365 205 ntBASIC1.37□□□□□ -2.19
Col6a3E9PWQ3 Gm22088-201ENSMUST00000158341 117 ntBASIC1.37□□□□□ -2.19
Col6a3E9PWQ3 Gm29597-201ENSMUST00000188035 308 ntBASIC1.37□□□□□ -2.19
Col6a3E9PWQ3 Gm44666-201ENSMUST00000208544 391 ntBASIC1.37□□□□□ -2.19
Col6a3E9PWQ3 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC1.37□□□□□ -2.19
Col6a3E9PWQ3 AC130823.2-201ENSMUST00000226169 290 ntBASIC1.37□□□□□ -2.19
Col6a3E9PWQ3 Gm25409-201ENSMUST00000083764 131 ntBASIC1.37□□□□□ -2.19
Col6a3E9PWQ3 Gm23321-201ENSMUST00000104465 126 ntBASIC1.36□□□□□ -2.19
Col6a3E9PWQ3 Gm22858-201ENSMUST00000174972 76 ntBASIC1.36□□□□□ -2.19
Col6a3E9PWQ3 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
Col6a3E9PWQ3 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.36□□□□□ -2.19
Col6a3E9PWQ3 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
Col6a3E9PWQ3 Gm13714-201ENSMUST00000117313 221 ntBASIC1.36□□□□□ -2.19
Col6a3E9PWQ3 Gm14558-201ENSMUST00000117458 381 ntBASIC1.36□□□□□ -2.19
Col6a3E9PWQ3 Gm15065-201ENSMUST00000121699 273 ntBASIC1.36□□□□□ -2.19
Col6a3E9PWQ3 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC1.36□□□□□ -2.19
Col6a3E9PWQ3 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC1.36□□□□□ -2.19
Col6a3E9PWQ3 AC107369.1-201ENSMUST00000227373 860 ntBASIC1.36□□□□□ -2.19
Col6a3E9PWQ3 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
Col6a3E9PWQ3 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
Col6a3E9PWQ3 Gm17161-201ENSMUST00000169187 524 ntBASIC1.35□□□□□ -2.19
Col6a3E9PWQ3 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
Col6a3E9PWQ3 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC1.35□□□□□ -2.19
Col6a3E9PWQ3 Gm23994-201ENSMUST00000158059 88 ntBASIC1.35□□□□□ -2.19
Col6a3E9PWQ3 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC1.35□□□□□ -2.19
Col6a3E9PWQ3 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC1.35□□□□□ -2.19
Col6a3E9PWQ3 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
Col6a3E9PWQ3 Gm14910-201ENSMUST00000121037 1805 ntBASIC1.35□□□□□ -2.19
Col6a3E9PWQ3 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
Col6a3E9PWQ3 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC1.35□□□□□ -2.19
Col6a3E9PWQ3 Gm15125-201ENSMUST00000116185 800 ntBASIC1.35□□□□□ -2.19
Col6a3E9PWQ3 Gm23221-201ENSMUST00000158118 93 ntBASIC1.35□□□□□ -2.19
Col6a3E9PWQ3 Mir5098-201ENSMUST00000175320 82 ntBASIC1.35□□□□□ -2.19
Col6a3E9PWQ3 Gm24572-201ENSMUST00000175505 88 ntBASIC1.35□□□□□ -2.19
Col6a3E9PWQ3 Gm22583-201ENSMUST00000178031 107 ntBASIC1.35□□□□□ -2.19
Col6a3E9PWQ3 AC144628.2-201ENSMUST00000227374 352 ntBASIC1.35□□□□□ -2.19
Col6a3E9PWQ3 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
Col6a3E9PWQ3 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
Col6a3E9PWQ3 Gm24061-201ENSMUST00000157489 120 ntBASIC1.34□□□□□ -2.19
Col6a3E9PWQ3 AC122465.2-201ENSMUST00000221774 354 ntBASIC1.34□□□□□ -2.19
Col6a3E9PWQ3 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC1.34□□□□□ -2.19
Col6a3E9PWQ3 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
Col6a3E9PWQ3 Gm11876-201ENSMUST00000120002 269 ntBASIC1.34□□□□□ -2.2
Col6a3E9PWQ3 Gm22304-201ENSMUST00000082688 129 ntBASIC1.34□□□□□ -2.2
Col6a3E9PWQ3 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
Col6a3E9PWQ3 Gm13246-201ENSMUST00000120994 315 ntBASIC1.34□□□□□ -2.2
Col6a3E9PWQ3 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC1.34□□□□□ -2.2
Col6a3E9PWQ3 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
Col6a3E9PWQ3 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC1.33□□□□□ -2.2
Col6a3E9PWQ3 Mir1197-201ENSMUST00000117037 120 ntBASIC1.33□□□□□ -2.2
Col6a3E9PWQ3 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC1.33□□□□□ -2.2
Col6a3E9PWQ3 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC1.33□□□□□ -2.2
Col6a3E9PWQ3 Gm45445-201ENSMUST00000209586 232 ntBASIC1.33□□□□□ -2.2
Col6a3E9PWQ3 Gm14039-201ENSMUST00000118705 101 ntBASIC1.33□□□□□ -2.2
Col6a3E9PWQ3 Gm15106-201ENSMUST00000119691 821 ntBASIC1.33□□□□□ -2.2
Col6a3E9PWQ3 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
Col6a3E9PWQ3 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC1.33□□□□□ -2.2
Col6a3E9PWQ3 n-R5s52-201ENSMUST00000104614 113 ntBASIC1.32□□□□□ -2.2
Col6a3E9PWQ3 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Col6a3E9PWQ3 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
Col6a3E9PWQ3 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Col6a3E9PWQ3 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.32□□□□□ -2.2
Col6a3E9PWQ3 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Col6a3E9PWQ3 Gm12934-201ENSMUST00000119221 343 ntBASIC1.32□□□□□ -2.2
Col6a3E9PWQ3 Gm14128-201ENSMUST00000119514 1011 ntBASIC1.32□□□□□ -2.2
Col6a3E9PWQ3 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
Col6a3E9PWQ3 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC1.32□□□□□ -2.2
Col6a3E9PWQ3 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Col6a3E9PWQ3 Gm37899-201ENSMUST00000193116 8717 ntBASIC1.32□□□□□ -2.2
Col6a3E9PWQ3 Gm12587-201ENSMUST00000120180 427 ntBASIC1.32□□□□□ -2.2
Col6a3E9PWQ3 Gm8207-201ENSMUST00000171204 502 ntBASIC1.32□□□□□ -2.2
Col6a3E9PWQ3 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Col6a3E9PWQ3 Gm22108-201ENSMUST00000177961 106 ntBASIC1.32□□□□□ -2.2
Col6a3E9PWQ3 Gm24798-201ENSMUST00000179334 106 ntBASIC1.32□□□□□ -2.2
Col6a3E9PWQ3 Gm19649-201ENSMUST00000201126 822 ntBASIC1.32□□□□□ -2.2
Col6a3E9PWQ3 Gm3442-201ENSMUST00000216808 710 ntBASIC1.32□□□□□ -2.2
Col6a3E9PWQ3 AC116656.1-201ENSMUST00000227040 755 ntBASIC1.32□□□□□ -2.2
Col6a3E9PWQ3 Gm25555-201ENSMUST00000158078 111 ntBASIC1.31□□□□□ -2.2
Col6a3E9PWQ3 Gm9632-201ENSMUST00000195934 643 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms