Protein–RNA interactions for Protein: A3KGF9

Ccdc9b, Coiled-coil domain-containing protein 9B, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9bA3KGF9 Gm44010-201ENSMUST00000204432 331 ntBASIC4.33□□□□□ -1.72
Ccdc9bA3KGF9 Fth-ps3-201ENSMUST00000210405 358 ntBASIC4.33□□□□□ -1.72
Ccdc9bA3KGF9 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC4.33□□□□□ -1.72
Ccdc9bA3KGF9 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC4.33□□□□□ -1.72
Ccdc9bA3KGF9 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.33□□□□□ -1.72
Ccdc9bA3KGF9 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC4.33□□□□□ -1.72
Ccdc9bA3KGF9 AC154305.3-201ENSMUST00000224661 552 ntBASIC4.33□□□□□ -1.72
Ccdc9bA3KGF9 Gm22685-201ENSMUST00000082848 106 ntBASIC4.33□□□□□ -1.72
Ccdc9bA3KGF9 Gm25257-201ENSMUST00000083907 110 ntBASIC4.33□□□□□ -1.72
Ccdc9bA3KGF9 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Ccdc9bA3KGF9 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
Ccdc9bA3KGF9 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Ccdc9bA3KGF9 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Ccdc9bA3KGF9 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Ccdc9bA3KGF9 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC4.33□□□□□ -1.72
Ccdc9bA3KGF9 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Ccdc9bA3KGF9 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Ccdc9bA3KGF9 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Ccdc9bA3KGF9 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC4.33□□□□□ -1.72
Ccdc9bA3KGF9 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ccdc9bA3KGF9 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Ccdc9bA3KGF9 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC4.32□□□□□ -1.72
Ccdc9bA3KGF9 Gm43281-201ENSMUST00000202522 2704 ntBASIC4.32□□□□□ -1.72
Ccdc9bA3KGF9 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
Ccdc9bA3KGF9 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ccdc9bA3KGF9 Gm45129-201ENSMUST00000208444 2224 ntBASIC4.32□□□□□ -1.72
Ccdc9bA3KGF9 Gm24172-201ENSMUST00000104127 117 ntBASIC4.32□□□□□ -1.72
Ccdc9bA3KGF9 Gm13343-201ENSMUST00000116474 105 ntBASIC4.32□□□□□ -1.72
Ccdc9bA3KGF9 Gm15162-201ENSMUST00000119325 283 ntBASIC4.32□□□□□ -1.72
Ccdc9bA3KGF9 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC4.32□□□□□ -1.72
Ccdc9bA3KGF9 Gm23956-201ENSMUST00000157211 119 ntBASIC4.32□□□□□ -1.72
Ccdc9bA3KGF9 Gm25384-201ENSMUST00000157807 105 ntBASIC4.32□□□□□ -1.72
Ccdc9bA3KGF9 Gm22654-201ENSMUST00000157874 105 ntBASIC4.32□□□□□ -1.72
Ccdc9bA3KGF9 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC4.32□□□□□ -1.72
Ccdc9bA3KGF9 Gm22308-201ENSMUST00000177609 107 ntBASIC4.32□□□□□ -1.72
Ccdc9bA3KGF9 Gm3145-201ENSMUST00000188584 220 ntBASIC4.32□□□□□ -1.72
Ccdc9bA3KGF9 Gm29657-201ENSMUST00000189807 342 ntBASIC4.32□□□□□ -1.72
Ccdc9bA3KGF9 AL645522.1-201ENSMUST00000197692 104 ntBASIC4.32□□□□□ -1.72
Ccdc9bA3KGF9 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC4.32□□□□□ -1.72
Ccdc9bA3KGF9 AC160134.1-201ENSMUST00000213450 551 ntBASIC4.32□□□□□ -1.72
Ccdc9bA3KGF9 AC131720.3-201ENSMUST00000219113 275 ntBASIC4.32□□□□□ -1.72
Ccdc9bA3KGF9 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Ccdc9bA3KGF9 Gm9795-201ENSMUST00000062156 693 ntBASIC4.32□□□□□ -1.72
Ccdc9bA3KGF9 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ccdc9bA3KGF9 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Ccdc9bA3KGF9 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Ccdc9bA3KGF9 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
Ccdc9bA3KGF9 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Ccdc9bA3KGF9 Gm7135-202ENSMUST00000191257 1905 ntBASIC4.32□□□□□ -1.72
Ccdc9bA3KGF9 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC4.32□□□□□ -1.72
Ccdc9bA3KGF9 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
Ccdc9bA3KGF9 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ccdc9bA3KGF9 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
Ccdc9bA3KGF9 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Ccdc9bA3KGF9 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Ccdc9bA3KGF9 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Ccdc9bA3KGF9 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Ccdc9bA3KGF9 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
Ccdc9bA3KGF9 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Ccdc9bA3KGF9 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Ccdc9bA3KGF9 Gm15002-201ENSMUST00000118406 452 ntBASIC4.31□□□□□ -1.72
Ccdc9bA3KGF9 Gm11631-201ENSMUST00000119220 156 ntBASIC4.31□□□□□ -1.72
Ccdc9bA3KGF9 Gm13541-201ENSMUST00000119519 283 ntBASIC4.31□□□□□ -1.72
Ccdc9bA3KGF9 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC4.31□□□□□ -1.72
Ccdc9bA3KGF9 Gm14619-201ENSMUST00000120480 168 ntBASIC4.31□□□□□ -1.72
Ccdc9bA3KGF9 Gm7840-201ENSMUST00000122086 533 ntBASIC4.31□□□□□ -1.72
Ccdc9bA3KGF9 Gm22514-201ENSMUST00000122547 308 ntBASIC4.31□□□□□ -1.72
Ccdc9bA3KGF9 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Ccdc9bA3KGF9 Gm16218-201ENSMUST00000155424 388 ntBASIC4.31□□□□□ -1.72
Ccdc9bA3KGF9 Gm25220-201ENSMUST00000157546 95 ntBASIC4.31□□□□□ -1.72
Ccdc9bA3KGF9 Gm26362-201ENSMUST00000158865 315 ntBASIC4.31□□□□□ -1.72
Ccdc9bA3KGF9 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC4.31□□□□□ -1.72
Ccdc9bA3KGF9 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Ccdc9bA3KGF9 Gm7182-201ENSMUST00000193351 732 ntBASIC4.31□□□□□ -1.72
Ccdc9bA3KGF9 Gm38332-201ENSMUST00000194189 147 ntBASIC4.31□□□□□ -1.72
Ccdc9bA3KGF9 AC122464.1-201ENSMUST00000202789 770 ntBASIC4.31□□□□□ -1.72
Ccdc9bA3KGF9 CT485612.4-201ENSMUST00000223405 250 ntBASIC4.31□□□□□ -1.72
Ccdc9bA3KGF9 AC161269.1-201ENSMUST00000228426 318 ntBASIC4.31□□□□□ -1.72
Ccdc9bA3KGF9 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Ccdc9bA3KGF9 Gm25078-201ENSMUST00000082530 107 ntBASIC4.31□□□□□ -1.72
Ccdc9bA3KGF9 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Ccdc9bA3KGF9 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Ccdc9bA3KGF9 Gm44250-201ENSMUST00000203092 4229 ntBASIC4.31□□□□□ -1.72
Ccdc9bA3KGF9 AC149588.1-201ENSMUST00000228274 3745 ntBASIC4.31□□□□□ -1.72
Ccdc9bA3KGF9 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Ccdc9bA3KGF9 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC4.31□□□□□ -1.72
Ccdc9bA3KGF9 Gm43009-201ENSMUST00000199979 3566 ntBASIC4.31□□□□□ -1.72
Ccdc9bA3KGF9 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
Ccdc9bA3KGF9 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
Ccdc9bA3KGF9 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.31□□□□□ -1.72
Ccdc9bA3KGF9 AC139218.1-201ENSMUST00000228215 4287 ntBASIC4.31□□□□□ -1.72
Ccdc9bA3KGF9 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
Ccdc9bA3KGF9 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Ccdc9bA3KGF9 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Ccdc9bA3KGF9 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Ccdc9bA3KGF9 Gm45324-201ENSMUST00000211193 5638 ntBASIC4.3□□□□□ -1.72
Ccdc9bA3KGF9 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
Ccdc9bA3KGF9 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
Ccdc9bA3KGF9 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC4.3□□□□□ -1.72
Ccdc9bA3KGF9 Gm37848-201ENSMUST00000195288 3103 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 92.1 ms