Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Scn3aA2ASI5 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.3□□□□□ -2.04
Scn3aA2ASI5 Gm15090-201ENSMUST00000118787 1196 ntBASIC2.3□□□□□ -2.04
Scn3aA2ASI5 Gm11430-201ENSMUST00000121317 217 ntBASIC2.3□□□□□ -2.04
Scn3aA2ASI5 Gm15089-201ENSMUST00000122332 1196 ntBASIC2.3□□□□□ -2.04
Scn3aA2ASI5 Gm13194-201ENSMUST00000142299 311 ntBASIC2.3□□□□□ -2.04
Scn3aA2ASI5 Gm22727-201ENSMUST00000158090 116 ntBASIC2.3□□□□□ -2.04
Scn3aA2ASI5 Gm23312-201ENSMUST00000158774 102 ntBASIC2.3□□□□□ -2.04
Scn3aA2ASI5 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC2.3□□□□□ -2.04
Scn3aA2ASI5 Gm27698-201ENSMUST00000184060 249 ntBASIC2.3□□□□□ -2.04
Scn3aA2ASI5 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC2.3□□□□□ -2.04
Scn3aA2ASI5 Gm45382-201ENSMUST00000210607 151 ntBASIC2.3□□□□□ -2.04
Scn3aA2ASI5 Gm18729-201ENSMUST00000217230 621 ntBASIC2.3□□□□□ -2.04
Scn3aA2ASI5 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC2.3□□□□□ -2.04
Scn3aA2ASI5 AC107663.3-201ENSMUST00000225873 601 ntBASIC2.3□□□□□ -2.04
Scn3aA2ASI5 AC115357.1-201ENSMUST00000227575 466 ntBASIC2.3□□□□□ -2.04
Scn3aA2ASI5 AC121598.3-201ENSMUST00000227179 1643 ntBASIC2.3□□□□□ -2.04
Scn3aA2ASI5 Gm37602-201ENSMUST00000195187 3310 ntBASIC2.3□□□□□ -2.04
Scn3aA2ASI5 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Scn3aA2ASI5 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
Scn3aA2ASI5 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.29□□□□□ -2.04
Scn3aA2ASI5 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Scn3aA2ASI5 Gm25728-201ENSMUST00000104525 159 ntBASIC2.29□□□□□ -2.04
Scn3aA2ASI5 Gm13731-201ENSMUST00000117332 196 ntBASIC2.29□□□□□ -2.04
Scn3aA2ASI5 Gm13439-201ENSMUST00000117541 409 ntBASIC2.29□□□□□ -2.04
Scn3aA2ASI5 Gm13678-201ENSMUST00000118926 340 ntBASIC2.29□□□□□ -2.04
Scn3aA2ASI5 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC2.29□□□□□ -2.04
Scn3aA2ASI5 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC2.29□□□□□ -2.04
Scn3aA2ASI5 Gm43427-201ENSMUST00000198188 331 ntBASIC2.29□□□□□ -2.04
Scn3aA2ASI5 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC2.29□□□□□ -2.04
Scn3aA2ASI5 Gm45296-201ENSMUST00000209625 205 ntBASIC2.29□□□□□ -2.04
Scn3aA2ASI5 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC2.29□□□□□ -2.04
Scn3aA2ASI5 CT030238.4-201ENSMUST00000228579 801 ntBASIC2.29□□□□□ -2.04
Scn3aA2ASI5 Gm7739-201ENSMUST00000221131 1560 ntBASIC2.29□□□□□ -2.04
Scn3aA2ASI5 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Scn3aA2ASI5 Gm4855-201ENSMUST00000192270 1967 ntBASIC2.29□□□□□ -2.04
Scn3aA2ASI5 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Scn3aA2ASI5 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Scn3aA2ASI5 Gm25097-201ENSMUST00000104042 145 ntBASIC2.29□□□□□ -2.04
Scn3aA2ASI5 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
Scn3aA2ASI5 Gm2003-201ENSMUST00000118537 636 ntBASIC2.29□□□□□ -2.04
Scn3aA2ASI5 Gm11582-201ENSMUST00000121041 236 ntBASIC2.29□□□□□ -2.04
Scn3aA2ASI5 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.29□□□□□ -2.04
Scn3aA2ASI5 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC2.29□□□□□ -2.04
Scn3aA2ASI5 Gm1989-201ENSMUST00000126244 636 ntBASIC2.29□□□□□ -2.04
Scn3aA2ASI5 Gm25488-201ENSMUST00000158728 118 ntBASIC2.29□□□□□ -2.04
Scn3aA2ASI5 Gm27861-201ENSMUST00000183920 214 ntBASIC2.29□□□□□ -2.04
Scn3aA2ASI5 Igkv2-105-201ENSMUST00000196931 377 ntBASIC2.29□□□□□ -2.04
Scn3aA2ASI5 Gm45445-201ENSMUST00000209586 232 ntBASIC2.29□□□□□ -2.04
Scn3aA2ASI5 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Scn3aA2ASI5 Gm20172-201ENSMUST00000193138 1551 ntBASIC2.28□□□□□ -2.04
Scn3aA2ASI5 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Scn3aA2ASI5 Gm5583-201ENSMUST00000174328 1519 ntBASIC2.28□□□□□ -2.04
Scn3aA2ASI5 Gm20345-201ENSMUST00000175839 2414 ntBASIC2.28□□□□□ -2.04
Scn3aA2ASI5 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Scn3aA2ASI5 Gm23010-201ENSMUST00000104151 126 ntBASIC2.28□□□□□ -2.04
Scn3aA2ASI5 Gm15147-201ENSMUST00000122263 483 ntBASIC2.28□□□□□ -2.04
Scn3aA2ASI5 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Scn3aA2ASI5 Gm22521-201ENSMUST00000158272 134 ntBASIC2.28□□□□□ -2.04
Scn3aA2ASI5 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC2.28□□□□□ -2.04
Scn3aA2ASI5 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Scn3aA2ASI5 Gm27964-201ENSMUST00000185195 62 ntBASIC2.28□□□□□ -2.04
Scn3aA2ASI5 Gm29657-201ENSMUST00000189807 342 ntBASIC2.28□□□□□ -2.04
Scn3aA2ASI5 Gm38231-201ENSMUST00000192030 347 ntBASIC2.28□□□□□ -2.04
Scn3aA2ASI5 Gm42465-201ENSMUST00000197036 492 ntBASIC2.28□□□□□ -2.04
Scn3aA2ASI5 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC2.28□□□□□ -2.04
Scn3aA2ASI5 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC2.28□□□□□ -2.04
Scn3aA2ASI5 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Scn3aA2ASI5 AC126440.1-201ENSMUST00000227098 349 ntBASIC2.28□□□□□ -2.04
Scn3aA2ASI5 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Scn3aA2ASI5 Gm26439-201ENSMUST00000082592 106 ntBASIC2.28□□□□□ -2.04
Scn3aA2ASI5 Gm25792-201ENSMUST00000083289 100 ntBASIC2.28□□□□□ -2.04
Scn3aA2ASI5 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
Scn3aA2ASI5 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
Scn3aA2ASI5 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Scn3aA2ASI5 Gm13046-201ENSMUST00000117391 501 ntBASIC2.27□□□□□ -2.05
Scn3aA2ASI5 Gm14979-201ENSMUST00000121561 1035 ntBASIC2.27□□□□□ -2.05
Scn3aA2ASI5 Gm22794-201ENSMUST00000157228 306 ntBASIC2.27□□□□□ -2.05
Scn3aA2ASI5 Gm24080-201ENSMUST00000175178 232 ntBASIC2.27□□□□□ -2.05
Scn3aA2ASI5 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.27□□□□□ -2.05
Scn3aA2ASI5 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.27□□□□□ -2.05
Scn3aA2ASI5 Gm19709-201ENSMUST00000215403 482 ntBASIC2.27□□□□□ -2.05
Scn3aA2ASI5 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Scn3aA2ASI5 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Scn3aA2ASI5 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Scn3aA2ASI5 Gm23470-201ENSMUST00000157129 120 ntBASIC2.27□□□□□ -2.05
Scn3aA2ASI5 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Scn3aA2ASI5 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC2.27□□□□□ -2.05
Scn3aA2ASI5 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC2.27□□□□□ -2.05
Scn3aA2ASI5 Gm28802-201ENSMUST00000188624 944 ntBASIC2.27□□□□□ -2.05
Scn3aA2ASI5 Gm6801-201ENSMUST00000190697 339 ntBASIC2.27□□□□□ -2.05
Scn3aA2ASI5 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC2.27□□□□□ -2.05
Scn3aA2ASI5 Gm19649-201ENSMUST00000201126 822 ntBASIC2.27□□□□□ -2.05
Scn3aA2ASI5 Gm31520-201ENSMUST00000203048 733 ntBASIC2.27□□□□□ -2.05
Scn3aA2ASI5 Gm44634-201ENSMUST00000206119 152 ntBASIC2.27□□□□□ -2.05
Scn3aA2ASI5 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Scn3aA2ASI5 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Scn3aA2ASI5 Gm23452-201ENSMUST00000083327 107 ntBASIC2.27□□□□□ -2.05
Scn3aA2ASI5 Gm23577-201ENSMUST00000103950 110 ntBASIC2.26□□□□□ -2.05
Scn3aA2ASI5 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms