Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Col13a1Q9R1N9 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Col13a1Q9R1N9 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC3.71□□□□□ -1.82
Col13a1Q9R1N9 Gm25764-201ENSMUST00000104092 134 ntBASIC3.71□□□□□ -1.82
Col13a1Q9R1N9 Gm23709-201ENSMUST00000104364 130 ntBASIC3.71□□□□□ -1.82
Col13a1Q9R1N9 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Col13a1Q9R1N9 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC3.71□□□□□ -1.82
Col13a1Q9R1N9 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC3.71□□□□□ -1.82
Col13a1Q9R1N9 Gm12191-201ENSMUST00000118307 348 ntBASIC3.71□□□□□ -1.82
Col13a1Q9R1N9 Gm11794-201ENSMUST00000119446 237 ntBASIC3.71□□□□□ -1.82
Col13a1Q9R1N9 Gm9703-201ENSMUST00000119573 343 ntBASIC3.71□□□□□ -1.82
Col13a1Q9R1N9 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC3.71□□□□□ -1.82
Col13a1Q9R1N9 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC3.71□□□□□ -1.82
Col13a1Q9R1N9 Gm15212-201ENSMUST00000122403 466 ntBASIC3.71□□□□□ -1.82
Col13a1Q9R1N9 Gm25104-201ENSMUST00000122476 163 ntBASIC3.71□□□□□ -1.82
Col13a1Q9R1N9 Gm26171-201ENSMUST00000158422 131 ntBASIC3.71□□□□□ -1.82
Col13a1Q9R1N9 Gm4761-201ENSMUST00000178086 582 ntBASIC3.71□□□□□ -1.82
Col13a1Q9R1N9 Gm27999-201ENSMUST00000183539 193 ntBASIC3.71□□□□□ -1.82
Col13a1Q9R1N9 Gm29397-201ENSMUST00000185205 333 ntBASIC3.71□□□□□ -1.82
Col13a1Q9R1N9 Gm29330-201ENSMUST00000190032 699 ntBASIC3.71□□□□□ -1.82
Col13a1Q9R1N9 Gm29097-201ENSMUST00000190273 422 ntBASIC3.71□□□□□ -1.82
Col13a1Q9R1N9 Igkv11-118-201ENSMUST00000199448 346 ntBASIC3.71□□□□□ -1.82
Col13a1Q9R1N9 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Col13a1Q9R1N9 Gm43028-201ENSMUST00000202561 481 ntBASIC3.71□□□□□ -1.82
Col13a1Q9R1N9 Gm44879-201ENSMUST00000207007 503 ntBASIC3.71□□□□□ -1.82
Col13a1Q9R1N9 AC124772.1-201ENSMUST00000221325 151 ntBASIC3.71□□□□□ -1.82
Col13a1Q9R1N9 CT030242.2-201ENSMUST00000221588 148 ntBASIC3.71□□□□□ -1.82
Col13a1Q9R1N9 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC3.71□□□□□ -1.82
Col13a1Q9R1N9 AC154576.2-202ENSMUST00000223916 688 ntBASIC3.71□□□□□ -1.82
Col13a1Q9R1N9 Ear-ps9-202ENSMUST00000226796 245 ntBASIC3.71□□□□□ -1.82
Col13a1Q9R1N9 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC3.71□□□□□ -1.82
Col13a1Q9R1N9 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC3.71□□□□□ -1.82
Col13a1Q9R1N9 Gm10343-201ENSMUST00000096279 348 ntBASIC3.71□□□□□ -1.82
Col13a1Q9R1N9 Gm2123-201ENSMUST00000221476 2836 ntBASIC3.71□□□□□ -1.82
Col13a1Q9R1N9 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Col13a1Q9R1N9 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
Col13a1Q9R1N9 Gm38069-201ENSMUST00000195360 2144 ntBASIC3.71□□□□□ -1.82
Col13a1Q9R1N9 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
Col13a1Q9R1N9 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Col13a1Q9R1N9 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Col13a1Q9R1N9 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Col13a1Q9R1N9 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Col13a1Q9R1N9 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 Gm3584-201ENSMUST00000173822 2565 ntBASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 Gm38010-201ENSMUST00000192592 2784 ntBASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 Gm22936-201ENSMUST00000103955 126 ntBASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 Gm25727-201ENSMUST00000104522 131 ntBASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 Gm13378-201ENSMUST00000117483 336 ntBASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 Gm12646-201ENSMUST00000119144 238 ntBASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 Gm5123-201ENSMUST00000121905 837 ntBASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 Gm5755-201ENSMUST00000152394 837 ntBASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 Gm23957-201ENSMUST00000157209 90 ntBASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 Gm25283-201ENSMUST00000157272 77 ntBASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 Gm23098-201ENSMUST00000157552 299 ntBASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 Gm23391-201ENSMUST00000157579 104 ntBASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 Gm24314-201ENSMUST00000158274 123 ntBASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 Gm23702-201ENSMUST00000158840 130 ntBASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 Gm26501-201ENSMUST00000178307 107 ntBASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 Gm24862-201ENSMUST00000179103 79 ntBASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 Gm23310-201ENSMUST00000179105 79 ntBASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 Gm25461-201ENSMUST00000179293 79 ntBASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 Gm24415-201ENSMUST00000180218 107 ntBASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 Gm27245-201ENSMUST00000184385 376 ntBASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 Gm27694-201ENSMUST00000184740 86 ntBASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 Gm18357-201ENSMUST00000188184 580 ntBASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 Gm2719-201ENSMUST00000191929 444 ntBASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 Gm37104-201ENSMUST00000193278 196 ntBASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 Gm45796-201ENSMUST00000212483 114 ntBASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 Gm9616-201ENSMUST00000221154 781 ntBASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 Gm5265-201ENSMUST00000076828 342 ntBASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 Gm23451-201ENSMUST00000083328 122 ntBASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 Mir496a-201ENSMUST00000093627 79 ntBASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 AC155805.1-201ENSMUST00000222419 3808 ntBASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Col13a1Q9R1N9 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
Col13a1Q9R1N9 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.69□□□□□ -1.82
Col13a1Q9R1N9 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Col13a1Q9R1N9 Gm25565-201ENSMUST00000104605 105 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 99.2 ms