Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Gm42486-201ENSMUST00000200369 3486 ntBASIC4.8□□□□□ -1.64
Nubp1Q9R060 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
Nubp1Q9R060 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
Nubp1Q9R060 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC4.8□□□□□ -1.64
Nubp1Q9R060 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC4.8□□□□□ -1.64
Nubp1Q9R060 Mir466b-3-201ENSMUST00000103806 81 ntBASIC4.8□□□□□ -1.64
Nubp1Q9R060 Gm24117-201ENSMUST00000103973 133 ntBASIC4.8□□□□□ -1.64
Nubp1Q9R060 Gm15497-201ENSMUST00000119137 551 ntBASIC4.8□□□□□ -1.64
Nubp1Q9R060 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC4.8□□□□□ -1.64
Nubp1Q9R060 Gm24690-201ENSMUST00000157759 97 ntBASIC4.8□□□□□ -1.64
Nubp1Q9R060 Mir1957b-201ENSMUST00000184608 123 ntBASIC4.8□□□□□ -1.64
Nubp1Q9R060 Ighv15-1-201ENSMUST00000194450 276 ntBASIC4.8□□□□□ -1.64
Nubp1Q9R060 Gm37431-201ENSMUST00000195102 111 ntBASIC4.8□□□□□ -1.64
Nubp1Q9R060 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Nubp1Q9R060 Gm42855-201ENSMUST00000197388 253 ntBASIC4.8□□□□□ -1.64
Nubp1Q9R060 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Nubp1Q9R060 Gm45543-201ENSMUST00000209327 88 ntBASIC4.8□□□□□ -1.64
Nubp1Q9R060 Supt4b-201ENSMUST00000214434 351 ntBASIC4.8□□□□□ -1.64
Nubp1Q9R060 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Nubp1Q9R060 Gm18617-201ENSMUST00000222311 259 ntBASIC4.8□□□□□ -1.64
Nubp1Q9R060 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Nubp1Q9R060 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC4.8□□□□□ -1.64
Nubp1Q9R060 Gm23511-201ENSMUST00000083084 164 ntBASIC4.8□□□□□ -1.64
Nubp1Q9R060 Gm23462-201ENSMUST00000083264 104 ntBASIC4.8□□□□□ -1.64
Nubp1Q9R060 Gm22741-201ENSMUST00000083438 165 ntBASIC4.8□□□□□ -1.64
Nubp1Q9R060 Mir449a-201ENSMUST00000083641 91 ntBASIC4.8□□□□□ -1.64
Nubp1Q9R060 Gm22350-201ENSMUST00000083924 156 ntBASIC4.8□□□□□ -1.64
Nubp1Q9R060 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Nubp1Q9R060 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Nubp1Q9R060 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Nubp1Q9R060 Gm42946-201ENSMUST00000196108 2570 ntBASIC4.8□□□□□ -1.64
Nubp1Q9R060 Gm43175-201ENSMUST00000198450 3810 ntBASIC4.8□□□□□ -1.64
Nubp1Q9R060 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Nubp1Q9R060 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Nubp1Q9R060 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Nubp1Q9R060 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Nubp1Q9R060 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Nubp1Q9R060 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Nubp1Q9R060 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC4.79□□□□□ -1.64
Nubp1Q9R060 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Nubp1Q9R060 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC4.79□□□□□ -1.64
Nubp1Q9R060 Gm15022-201ENSMUST00000122074 746 ntBASIC4.79□□□□□ -1.64
Nubp1Q9R060 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC4.79□□□□□ -1.64
Nubp1Q9R060 Gm23044-201ENSMUST00000157891 100 ntBASIC4.79□□□□□ -1.64
Nubp1Q9R060 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC4.79□□□□□ -1.64
Nubp1Q9R060 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC4.79□□□□□ -1.64
Nubp1Q9R060 Gm37882-201ENSMUST00000195254 196 ntBASIC4.79□□□□□ -1.64
Nubp1Q9R060 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Nubp1Q9R060 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Nubp1Q9R060 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Nubp1Q9R060 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Nubp1Q9R060 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Nubp1Q9R060 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Nubp1Q9R060 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Nubp1Q9R060 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Nubp1Q9R060 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Nubp1Q9R060 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Nubp1Q9R060 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Nubp1Q9R060 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Nubp1Q9R060 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Nubp1Q9R060 AC115970.1-201ENSMUST00000218910 1758 ntBASIC4.78□□□□□ -1.64
Nubp1Q9R060 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Nubp1Q9R060 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
Nubp1Q9R060 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Nubp1Q9R060 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC4.78□□□□□ -1.64
Nubp1Q9R060 Gm12760-201ENSMUST00000117861 482 ntBASIC4.78□□□□□ -1.64
Nubp1Q9R060 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC4.78□□□□□ -1.64
Nubp1Q9R060 Gm25605-201ENSMUST00000158364 124 ntBASIC4.78□□□□□ -1.64
Nubp1Q9R060 Gm6872-201ENSMUST00000165001 700 ntBASIC4.78□□□□□ -1.64
Nubp1Q9R060 Gm22699-201ENSMUST00000175376 105 ntBASIC4.78□□□□□ -1.64
Nubp1Q9R060 Gm24949-201ENSMUST00000183609 215 ntBASIC4.78□□□□□ -1.64
Nubp1Q9R060 Gm27551-201ENSMUST00000184258 77 ntBASIC4.78□□□□□ -1.64
Nubp1Q9R060 Gm28825-201ENSMUST00000186233 238 ntBASIC4.78□□□□□ -1.64
Nubp1Q9R060 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Nubp1Q9R060 Mir409-201ENSMUST00000198153 79 ntBASIC4.78□□□□□ -1.64
Nubp1Q9R060 Gm43680-201ENSMUST00000199466 340 ntBASIC4.78□□□□□ -1.64
Nubp1Q9R060 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC4.78□□□□□ -1.64
Nubp1Q9R060 Snord14d-201ENSMUST00000083424 86 ntBASIC4.78□□□□□ -1.64
Nubp1Q9R060 Gm24762-201ENSMUST00000083689 104 ntBASIC4.78□□□□□ -1.64
Nubp1Q9R060 AC122382.2-201ENSMUST00000225128 3602 ntBASIC4.78□□□□□ -1.64
Nubp1Q9R060 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Nubp1Q9R060 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC4.78□□□□□ -1.64
Nubp1Q9R060 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Nubp1Q9R060 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Nubp1Q9R060 Gm37205-201ENSMUST00000194820 2736 ntBASIC4.78□□□□□ -1.64
Nubp1Q9R060 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Nubp1Q9R060 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Nubp1Q9R060 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Nubp1Q9R060 Gm38198-201ENSMUST00000191772 3581 ntBASIC4.78□□□□□ -1.64
Nubp1Q9R060 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.65
Nubp1Q9R060 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Nubp1Q9R060 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Nubp1Q9R060 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Nubp1Q9R060 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC4.77□□□□□ -1.65
Nubp1Q9R060 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Nubp1Q9R060 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC4.77□□□□□ -1.65
Nubp1Q9R060 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Nubp1Q9R060 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Nubp1Q9R060 Gm14069-201ENSMUST00000120815 229 ntBASIC4.77□□□□□ -1.65
Nubp1Q9R060 Gm13132-201ENSMUST00000121194 472 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms