Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm22917-201ENSMUST00000180116 110 ntBASIC2.43□□□□□ -2.02
Trem1Q9JKE2 Gm21780-201ENSMUST00000180128 498 ntBASIC2.43□□□□□ -2.02
Trem1Q9JKE2 Gm21572-201ENSMUST00000180134 498 ntBASIC2.43□□□□□ -2.02
Trem1Q9JKE2 Gm21529-201ENSMUST00000180175 498 ntBASIC2.43□□□□□ -2.02
Trem1Q9JKE2 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.43□□□□□ -2.02
Trem1Q9JKE2 Gm20058-201ENSMUST00000186939 284 ntBASIC2.43□□□□□ -2.02
Trem1Q9JKE2 Gm29370-202ENSMUST00000187476 499 ntBASIC2.43□□□□□ -2.02
Trem1Q9JKE2 Gm37568-201ENSMUST00000191755 364 ntBASIC2.43□□□□□ -2.02
Trem1Q9JKE2 Gm42665-201ENSMUST00000202100 586 ntBASIC2.43□□□□□ -2.02
Trem1Q9JKE2 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC2.43□□□□□ -2.02
Trem1Q9JKE2 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Trem1Q9JKE2 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Trem1Q9JKE2 Gm45245-201ENSMUST00000210082 376 ntBASIC2.43□□□□□ -2.02
Trem1Q9JKE2 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC2.43□□□□□ -2.02
Trem1Q9JKE2 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC2.43□□□□□ -2.02
Trem1Q9JKE2 AC161758.1-201ENSMUST00000226123 310 ntBASIC2.43□□□□□ -2.02
Trem1Q9JKE2 AC122393.3-201ENSMUST00000226343 1059 ntBASIC2.43□□□□□ -2.02
Trem1Q9JKE2 AC102603.1-201ENSMUST00000227481 584 ntBASIC2.43□□□□□ -2.02
Trem1Q9JKE2 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.43□□□□□ -2.02
Trem1Q9JKE2 Gm23727-201ENSMUST00000083352 164 ntBASIC2.43□□□□□ -2.02
Trem1Q9JKE2 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Trem1Q9JKE2 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Trem1Q9JKE2 Gm37761-201ENSMUST00000194989 2098 ntBASIC2.43□□□□□ -2.02
Trem1Q9JKE2 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Trem1Q9JKE2 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Trem1Q9JKE2 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.42□□□□□ -2.02
Trem1Q9JKE2 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.42□□□□□ -2.02
Trem1Q9JKE2 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Trem1Q9JKE2 Gm24340-201ENSMUST00000104208 97 ntBASIC2.42□□□□□ -2.02
Trem1Q9JKE2 Gm15846-201ENSMUST00000116022 320 ntBASIC2.42□□□□□ -2.02
Trem1Q9JKE2 Gm12825-201ENSMUST00000120249 563 ntBASIC2.42□□□□□ -2.02
Trem1Q9JKE2 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC2.42□□□□□ -2.02
Trem1Q9JKE2 Gm14629-201ENSMUST00000122428 144 ntBASIC2.42□□□□□ -2.02
Trem1Q9JKE2 Gm26256-201ENSMUST00000122499 186 ntBASIC2.42□□□□□ -2.02
Trem1Q9JKE2 Gm24836-201ENSMUST00000122609 108 ntBASIC2.42□□□□□ -2.02
Trem1Q9JKE2 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC2.42□□□□□ -2.02
Trem1Q9JKE2 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC2.42□□□□□ -2.02
Trem1Q9JKE2 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC2.42□□□□□ -2.02
Trem1Q9JKE2 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC2.42□□□□□ -2.02
Trem1Q9JKE2 Gm23325-201ENSMUST00000157422 129 ntBASIC2.42□□□□□ -2.02
Trem1Q9JKE2 Gm24008-201ENSMUST00000157733 138 ntBASIC2.42□□□□□ -2.02
Trem1Q9JKE2 Gm25334-201ENSMUST00000158036 110 ntBASIC2.42□□□□□ -2.02
Trem1Q9JKE2 Gm24111-201ENSMUST00000175491 97 ntBASIC2.42□□□□□ -2.02
Trem1Q9JKE2 Spin2g-201ENSMUST00000178425 687 ntBASIC2.42□□□□□ -2.02
Trem1Q9JKE2 Gm17929-201ENSMUST00000186851 627 ntBASIC2.42□□□□□ -2.02
Trem1Q9JKE2 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Trem1Q9JKE2 Mir7232-201ENSMUST00000197929 74 ntBASIC2.42□□□□□ -2.02
Trem1Q9JKE2 Gm17893-201ENSMUST00000203017 770 ntBASIC2.42□□□□□ -2.02
Trem1Q9JKE2 Gm43955-201ENSMUST00000204332 142 ntBASIC2.42□□□□□ -2.02
Trem1Q9JKE2 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC2.42□□□□□ -2.02
Trem1Q9JKE2 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC2.42□□□□□ -2.02
Trem1Q9JKE2 Gm19709-201ENSMUST00000215403 482 ntBASIC2.42□□□□□ -2.02
Trem1Q9JKE2 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Trem1Q9JKE2 AC174797.3-202ENSMUST00000224578 587 ntBASIC2.42□□□□□ -2.02
Trem1Q9JKE2 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Trem1Q9JKE2 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC2.42□□□□□ -2.02
Trem1Q9JKE2 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC2.42□□□□□ -2.02
Trem1Q9JKE2 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Trem1Q9JKE2 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Trem1Q9JKE2 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Trem1Q9JKE2 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Trem1Q9JKE2 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Trem1Q9JKE2 Gm38382-201ENSMUST00000193790 2499 ntBASIC2.42□□□□□ -2.02
Trem1Q9JKE2 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.41□□□□□ -2.02
Trem1Q9JKE2 Mir193b-201ENSMUST00000103784 79 ntBASIC2.41□□□□□ -2.02
Trem1Q9JKE2 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Trem1Q9JKE2 Gm6954-201ENSMUST00000117416 225 ntBASIC2.41□□□□□ -2.02
Trem1Q9JKE2 Gm11219-201ENSMUST00000118565 358 ntBASIC2.41□□□□□ -2.02
Trem1Q9JKE2 Gm12507-201ENSMUST00000119155 415 ntBASIC2.41□□□□□ -2.02
Trem1Q9JKE2 Gm14815-201ENSMUST00000120060 488 ntBASIC2.41□□□□□ -2.02
Trem1Q9JKE2 Gm16411-201ENSMUST00000122164 1100 ntBASIC2.41□□□□□ -2.02
Trem1Q9JKE2 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.41□□□□□ -2.02
Trem1Q9JKE2 Gm26105-201ENSMUST00000157253 190 ntBASIC2.41□□□□□ -2.02
Trem1Q9JKE2 Gm22330-201ENSMUST00000158068 115 ntBASIC2.41□□□□□ -2.02
Trem1Q9JKE2 Gm22947-201ENSMUST00000158559 91 ntBASIC2.41□□□□□ -2.02
Trem1Q9JKE2 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
Trem1Q9JKE2 Gm20651-201ENSMUST00000177219 329 ntBASIC2.41□□□□□ -2.02
Trem1Q9JKE2 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC2.41□□□□□ -2.02
Trem1Q9JKE2 Gm25194-201ENSMUST00000177987 79 ntBASIC2.41□□□□□ -2.02
Trem1Q9JKE2 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.41□□□□□ -2.02
Trem1Q9JKE2 Gm21758-201ENSMUST00000179336 819 ntBASIC2.41□□□□□ -2.02
Trem1Q9JKE2 Gm27700-201ENSMUST00000185003 81 ntBASIC2.41□□□□□ -2.02
Trem1Q9JKE2 Gm29647-201ENSMUST00000188795 666 ntBASIC2.41□□□□□ -2.02
Trem1Q9JKE2 Gm20832-201ENSMUST00000189076 665 ntBASIC2.41□□□□□ -2.02
Trem1Q9JKE2 Gm28241-201ENSMUST00000190916 235 ntBASIC2.41□□□□□ -2.02
Trem1Q9JKE2 Gm28504-201ENSMUST00000190977 666 ntBASIC2.41□□□□□ -2.02
Trem1Q9JKE2 Gm38044-201ENSMUST00000192964 487 ntBASIC2.41□□□□□ -2.02
Trem1Q9JKE2 Gm31511-201ENSMUST00000193134 657 ntBASIC2.41□□□□□ -2.02
Trem1Q9JKE2 Gm35843-201ENSMUST00000193716 666 ntBASIC2.41□□□□□ -2.02
Trem1Q9JKE2 Gm37993-201ENSMUST00000195301 988 ntBASIC2.41□□□□□ -2.02
Trem1Q9JKE2 Gm36728-201ENSMUST00000195782 665 ntBASIC2.41□□□□□ -2.02
Trem1Q9JKE2 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC2.41□□□□□ -2.02
Trem1Q9JKE2 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Trem1Q9JKE2 Gm23264-201ENSMUST00000083372 107 ntBASIC2.41□□□□□ -2.02
Trem1Q9JKE2 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Trem1Q9JKE2 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
Trem1Q9JKE2 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.4□□□□□ -2.02
Trem1Q9JKE2 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Trem1Q9JKE2 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Trem1Q9JKE2 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms