Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Nkx2-4Q9EQM3 AC153522.2-201ENSMUST00000218389 3853 ntBASIC3.6□□□□□ -1.83
Nkx2-4Q9EQM3 Gm45093-201ENSMUST00000206859 2463 ntBASIC3.6□□□□□ -1.83
Nkx2-4Q9EQM3 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC3.6□□□□□ -1.83
Nkx2-4Q9EQM3 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.59□□□□□ -1.83
Nkx2-4Q9EQM3 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Nkx2-4Q9EQM3 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
Nkx2-4Q9EQM3 Gm22750-201ENSMUST00000102076 103 ntBASIC3.59□□□□□ -1.83
Nkx2-4Q9EQM3 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Nkx2-4Q9EQM3 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Nkx2-4Q9EQM3 Gm11693-201ENSMUST00000119625 565 ntBASIC3.59□□□□□ -1.83
Nkx2-4Q9EQM3 Gm14389-201ENSMUST00000140453 241 ntBASIC3.59□□□□□ -1.83
Nkx2-4Q9EQM3 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC3.59□□□□□ -1.83
Nkx2-4Q9EQM3 Gm22491-201ENSMUST00000157190 102 ntBASIC3.59□□□□□ -1.83
Nkx2-4Q9EQM3 Gm17119-201ENSMUST00000163943 280 ntBASIC3.59□□□□□ -1.83
Nkx2-4Q9EQM3 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
Nkx2-4Q9EQM3 Mir6951-201ENSMUST00000183910 75 ntBASIC3.59□□□□□ -1.83
Nkx2-4Q9EQM3 Mir6363-201ENSMUST00000184880 114 ntBASIC3.59□□□□□ -1.83
Nkx2-4Q9EQM3 Gm6947-201ENSMUST00000186254 78 ntBASIC3.59□□□□□ -1.83
Nkx2-4Q9EQM3 Gm37575-201ENSMUST00000195467 309 ntBASIC3.59□□□□□ -1.83
Nkx2-4Q9EQM3 Gm5001-201ENSMUST00000204361 331 ntBASIC3.59□□□□□ -1.83
Nkx2-4Q9EQM3 Gm45427-201ENSMUST00000209572 1253 ntBASIC3.59□□□□□ -1.83
Nkx2-4Q9EQM3 AC154296.2-201ENSMUST00000214696 545 ntBASIC3.59□□□□□ -1.83
Nkx2-4Q9EQM3 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC3.59□□□□□ -1.83
Nkx2-4Q9EQM3 AC166358.10-201ENSMUST00000220556 144 ntBASIC3.59□□□□□ -1.83
Nkx2-4Q9EQM3 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC3.59□□□□□ -1.83
Nkx2-4Q9EQM3 CT010506.3-201ENSMUST00000223699 410 ntBASIC3.59□□□□□ -1.83
Nkx2-4Q9EQM3 AC115289.1-201ENSMUST00000224915 522 ntBASIC3.59□□□□□ -1.83
Nkx2-4Q9EQM3 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Nkx2-4Q9EQM3 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Nkx2-4Q9EQM3 n-R5s94-201ENSMUST00000082573 119 ntBASIC3.59□□□□□ -1.83
Nkx2-4Q9EQM3 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Nkx2-4Q9EQM3 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Nkx2-4Q9EQM3 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
Nkx2-4Q9EQM3 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
Nkx2-4Q9EQM3 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
Nkx2-4Q9EQM3 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
Nkx2-4Q9EQM3 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Nkx2-4Q9EQM3 Gm37387-201ENSMUST00000192201 1806 ntBASIC3.58□□□□□ -1.84
Nkx2-4Q9EQM3 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Nkx2-4Q9EQM3 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Nkx2-4Q9EQM3 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC3.58□□□□□ -1.84
Nkx2-4Q9EQM3 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC3.58□□□□□ -1.84
Nkx2-4Q9EQM3 Gm11254-201ENSMUST00000122368 653 ntBASIC3.58□□□□□ -1.84
Nkx2-4Q9EQM3 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC3.58□□□□□ -1.84
Nkx2-4Q9EQM3 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC3.58□□□□□ -1.84
Nkx2-4Q9EQM3 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC3.58□□□□□ -1.84
Nkx2-4Q9EQM3 Gm23753-201ENSMUST00000157575 149 ntBASIC3.58□□□□□ -1.84
Nkx2-4Q9EQM3 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC3.58□□□□□ -1.84
Nkx2-4Q9EQM3 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
Nkx2-4Q9EQM3 Gm24810-201ENSMUST00000175317 70 ntBASIC3.58□□□□□ -1.84
Nkx2-4Q9EQM3 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Nkx2-4Q9EQM3 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Nkx2-4Q9EQM3 Gm25314-201ENSMUST00000178810 79 ntBASIC3.58□□□□□ -1.84
Nkx2-4Q9EQM3 Gm24713-201ENSMUST00000178850 107 ntBASIC3.58□□□□□ -1.84
Nkx2-4Q9EQM3 Gm21726-201ENSMUST00000179654 392 ntBASIC3.58□□□□□ -1.84
Nkx2-4Q9EQM3 Gm25448-201ENSMUST00000180065 107 ntBASIC3.58□□□□□ -1.84
Nkx2-4Q9EQM3 Gm28598-201ENSMUST00000186490 615 ntBASIC3.58□□□□□ -1.84
Nkx2-4Q9EQM3 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC3.58□□□□□ -1.84
Nkx2-4Q9EQM3 Gm19641-201ENSMUST00000188432 417 ntBASIC3.58□□□□□ -1.84
Nkx2-4Q9EQM3 Gm29268-201ENSMUST00000188669 615 ntBASIC3.58□□□□□ -1.84
Nkx2-4Q9EQM3 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Nkx2-4Q9EQM3 Gm29218-205ENSMUST00000190846 615 ntBASIC3.58□□□□□ -1.84
Nkx2-4Q9EQM3 Gm28978-201ENSMUST00000191120 615 ntBASIC3.58□□□□□ -1.84
Nkx2-4Q9EQM3 Gm37172-201ENSMUST00000191926 615 ntBASIC3.58□□□□□ -1.84
Nkx2-4Q9EQM3 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC3.58□□□□□ -1.84
Nkx2-4Q9EQM3 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Nkx2-4Q9EQM3 AC125223.1-203ENSMUST00000225304 498 ntBASIC3.58□□□□□ -1.84
Nkx2-4Q9EQM3 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC3.58□□□□□ -1.84
Nkx2-4Q9EQM3 Snord35b-201ENSMUST00000082833 87 ntBASIC3.58□□□□□ -1.84
Nkx2-4Q9EQM3 Gm23970-201ENSMUST00000083319 107 ntBASIC3.58□□□□□ -1.84
Nkx2-4Q9EQM3 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Nkx2-4Q9EQM3 Gm44049-201ENSMUST00000204905 2984 ntBASIC3.57□□□□□ -1.84
Nkx2-4Q9EQM3 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Nkx2-4Q9EQM3 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Nkx2-4Q9EQM3 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Nkx2-4Q9EQM3 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
Nkx2-4Q9EQM3 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.57□□□□□ -1.84
Nkx2-4Q9EQM3 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Nkx2-4Q9EQM3 Gm14670-201ENSMUST00000117327 337 ntBASIC3.57□□□□□ -1.84
Nkx2-4Q9EQM3 Gm12386-201ENSMUST00000117380 688 ntBASIC3.57□□□□□ -1.84
Nkx2-4Q9EQM3 Gm15377-201ENSMUST00000119594 246 ntBASIC3.57□□□□□ -1.84
Nkx2-4Q9EQM3 Gm15379-201ENSMUST00000121224 648 ntBASIC3.57□□□□□ -1.84
Nkx2-4Q9EQM3 Gm24784-201ENSMUST00000157640 62 ntBASIC3.57□□□□□ -1.84
Nkx2-4Q9EQM3 Gm20794-201ENSMUST00000177626 628 ntBASIC3.57□□□□□ -1.84
Nkx2-4Q9EQM3 Gm21827-201ENSMUST00000178247 423 ntBASIC3.57□□□□□ -1.84
Nkx2-4Q9EQM3 Gm7909-201ENSMUST00000182688 614 ntBASIC3.57□□□□□ -1.84
Nkx2-4Q9EQM3 Gm27599-201ENSMUST00000183758 174 ntBASIC3.57□□□□□ -1.84
Nkx2-4Q9EQM3 Mir6413-201ENSMUST00000184049 108 ntBASIC3.57□□□□□ -1.84
Nkx2-4Q9EQM3 Gm38050-201ENSMUST00000191904 238 ntBASIC3.57□□□□□ -1.84
Nkx2-4Q9EQM3 Gm37054-201ENSMUST00000193481 543 ntBASIC3.57□□□□□ -1.84
Nkx2-4Q9EQM3 Gm44966-201ENSMUST00000208096 157 ntBASIC3.57□□□□□ -1.84
Nkx2-4Q9EQM3 Gm45438-201ENSMUST00000210242 564 ntBASIC3.57□□□□□ -1.84
Nkx2-4Q9EQM3 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC3.57□□□□□ -1.84
Nkx2-4Q9EQM3 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC3.57□□□□□ -1.84
Nkx2-4Q9EQM3 AC118639.1-204ENSMUST00000226401 694 ntBASIC3.57□□□□□ -1.84
Nkx2-4Q9EQM3 AC115291.1-201ENSMUST00000226803 258 ntBASIC3.57□□□□□ -1.84
Nkx2-4Q9EQM3 AC098719.1-201ENSMUST00000228920 371 ntBASIC3.57□□□□□ -1.84
Nkx2-4Q9EQM3 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.57□□□□□ -1.84
Nkx2-4Q9EQM3 Gm23932-201ENSMUST00000082914 107 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 101.7 ms