Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Nkx6-1Q99MA9 Gm11693-201ENSMUST00000119625 565 ntBASIC4.23□□□□□ -1.73
Nkx6-1Q99MA9 Gm14619-201ENSMUST00000120480 168 ntBASIC4.23□□□□□ -1.73
Nkx6-1Q99MA9 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Nkx6-1Q99MA9 Gm23902-201ENSMUST00000157571 134 ntBASIC4.23□□□□□ -1.73
Nkx6-1Q99MA9 Gm26490-201ENSMUST00000157879 140 ntBASIC4.23□□□□□ -1.73
Nkx6-1Q99MA9 Gm22389-201ENSMUST00000158193 301 ntBASIC4.23□□□□□ -1.73
Nkx6-1Q99MA9 Gm24944-201ENSMUST00000158330 128 ntBASIC4.23□□□□□ -1.73
Nkx6-1Q99MA9 Gm22911-201ENSMUST00000177920 107 ntBASIC4.23□□□□□ -1.73
Nkx6-1Q99MA9 Gm25939-201ENSMUST00000179876 191 ntBASIC4.23□□□□□ -1.73
Nkx6-1Q99MA9 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC4.23□□□□□ -1.73
Nkx6-1Q99MA9 Gm8296-201ENSMUST00000185597 524 ntBASIC4.23□□□□□ -1.73
Nkx6-1Q99MA9 Gm8790-201ENSMUST00000194108 322 ntBASIC4.23□□□□□ -1.73
Nkx6-1Q99MA9 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC4.23□□□□□ -1.73
Nkx6-1Q99MA9 AC122464.1-201ENSMUST00000202789 770 ntBASIC4.23□□□□□ -1.73
Nkx6-1Q99MA9 Gm18011-201ENSMUST00000203717 565 ntBASIC4.23□□□□□ -1.73
Nkx6-1Q99MA9 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Nkx6-1Q99MA9 Gm46998-201ENSMUST00000221444 330 ntBASIC4.23□□□□□ -1.73
Nkx6-1Q99MA9 AC164297.3-201ENSMUST00000224238 94 ntBASIC4.23□□□□□ -1.73
Nkx6-1Q99MA9 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Nkx6-1Q99MA9 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Nkx6-1Q99MA9 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
Nkx6-1Q99MA9 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
Nkx6-1Q99MA9 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Nkx6-1Q99MA9 Gm21035-201ENSMUST00000207867 2608 ntBASIC4.23□□□□□ -1.73
Nkx6-1Q99MA9 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Nkx6-1Q99MA9 Gm43654-201ENSMUST00000200664 3417 ntBASIC4.23□□□□□ -1.73
Nkx6-1Q99MA9 Gm45557-201ENSMUST00000210004 1651 ntBASIC4.22□□□□□ -1.73
Nkx6-1Q99MA9 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Nkx6-1Q99MA9 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Nkx6-1Q99MA9 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
Nkx6-1Q99MA9 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Nkx6-1Q99MA9 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Nkx6-1Q99MA9 n-R5s52-201ENSMUST00000104614 113 ntBASIC4.22□□□□□ -1.73
Nkx6-1Q99MA9 Gm23988-201ENSMUST00000117034 122 ntBASIC4.22□□□□□ -1.73
Nkx6-1Q99MA9 Gm13967-201ENSMUST00000120404 380 ntBASIC4.22□□□□□ -1.73
Nkx6-1Q99MA9 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC4.22□□□□□ -1.73
Nkx6-1Q99MA9 Gm25967-201ENSMUST00000157168 147 ntBASIC4.22□□□□□ -1.73
Nkx6-1Q99MA9 Gm24690-201ENSMUST00000157759 97 ntBASIC4.22□□□□□ -1.73
Nkx6-1Q99MA9 Gm24998-201ENSMUST00000157908 89 ntBASIC4.22□□□□□ -1.73
Nkx6-1Q99MA9 Gm24552-201ENSMUST00000158646 103 ntBASIC4.22□□□□□ -1.73
Nkx6-1Q99MA9 Gm16318-201ENSMUST00000162402 601 ntBASIC4.22□□□□□ -1.73
Nkx6-1Q99MA9 Gm8292-201ENSMUST00000162574 396 ntBASIC4.22□□□□□ -1.73
Nkx6-1Q99MA9 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Nkx6-1Q99MA9 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC4.22□□□□□ -1.73
Nkx6-1Q99MA9 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Nkx6-1Q99MA9 Gm6214-201ENSMUST00000178845 541 ntBASIC4.22□□□□□ -1.73
Nkx6-1Q99MA9 Gm26585-201ENSMUST00000180890 630 ntBASIC4.22□□□□□ -1.73
Nkx6-1Q99MA9 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC4.22□□□□□ -1.73
Nkx6-1Q99MA9 Gm18384-201ENSMUST00000195974 808 ntBASIC4.22□□□□□ -1.73
Nkx6-1Q99MA9 Gm9379-201ENSMUST00000196790 646 ntBASIC4.22□□□□□ -1.73
Nkx6-1Q99MA9 Gm42694-201ENSMUST00000196951 358 ntBASIC4.22□□□□□ -1.73
Nkx6-1Q99MA9 Gm44881-201ENSMUST00000205425 367 ntBASIC4.22□□□□□ -1.73
Nkx6-1Q99MA9 AC158622.1-201ENSMUST00000217107 230 ntBASIC4.22□□□□□ -1.73
Nkx6-1Q99MA9 AC158395.1-201ENSMUST00000227206 452 ntBASIC4.22□□□□□ -1.73
Nkx6-1Q99MA9 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Nkx6-1Q99MA9 Gm26497-201ENSMUST00000083146 107 ntBASIC4.22□□□□□ -1.73
Nkx6-1Q99MA9 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
Nkx6-1Q99MA9 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
Nkx6-1Q99MA9 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Nkx6-1Q99MA9 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
Nkx6-1Q99MA9 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.73
Nkx6-1Q99MA9 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC4.21□□□□□ -1.74
Nkx6-1Q99MA9 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Nkx6-1Q99MA9 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Nkx6-1Q99MA9 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC4.21□□□□□ -1.74
Nkx6-1Q99MA9 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC4.21□□□□□ -1.74
Nkx6-1Q99MA9 Gm6071-201ENSMUST00000119561 440 ntBASIC4.21□□□□□ -1.74
Nkx6-1Q99MA9 Gm14581-201ENSMUST00000121726 198 ntBASIC4.21□□□□□ -1.74
Nkx6-1Q99MA9 Gm9003-201ENSMUST00000121810 482 ntBASIC4.21□□□□□ -1.74
Nkx6-1Q99MA9 Gm14775-201ENSMUST00000122089 310 ntBASIC4.21□□□□□ -1.74
Nkx6-1Q99MA9 Gm23887-201ENSMUST00000122683 172 ntBASIC4.21□□□□□ -1.74
Nkx6-1Q99MA9 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC4.21□□□□□ -1.74
Nkx6-1Q99MA9 Gm13092-201ENSMUST00000136346 260 ntBASIC4.21□□□□□ -1.74
Nkx6-1Q99MA9 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC4.21□□□□□ -1.74
Nkx6-1Q99MA9 Gm22842-201ENSMUST00000157709 118 ntBASIC4.21□□□□□ -1.74
Nkx6-1Q99MA9 Gm22098-201ENSMUST00000157930 85 ntBASIC4.21□□□□□ -1.74
Nkx6-1Q99MA9 Mir6335-201ENSMUST00000184081 98 ntBASIC4.21□□□□□ -1.74
Nkx6-1Q99MA9 Mir8106-201ENSMUST00000184520 139 ntBASIC4.21□□□□□ -1.74
Nkx6-1Q99MA9 Gm28118-201ENSMUST00000185957 294 ntBASIC4.21□□□□□ -1.74
Nkx6-1Q99MA9 Gm28920-201ENSMUST00000189957 699 ntBASIC4.21□□□□□ -1.74
Nkx6-1Q99MA9 Gm37636-201ENSMUST00000193583 359 ntBASIC4.21□□□□□ -1.74
Nkx6-1Q99MA9 Gm38060-201ENSMUST00000194822 464 ntBASIC4.21□□□□□ -1.74
Nkx6-1Q99MA9 Gm43529-201ENSMUST00000199178 412 ntBASIC4.21□□□□□ -1.74
Nkx6-1Q99MA9 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Nkx6-1Q99MA9 Olfr1285-201ENSMUST00000208523 903 ntBASIC4.21□□□□□ -1.74
Nkx6-1Q99MA9 AC156798.1-201ENSMUST00000220508 224 ntBASIC4.21□□□□□ -1.74
Nkx6-1Q99MA9 AC124562.1-201ENSMUST00000224673 337 ntBASIC4.21□□□□□ -1.74
Nkx6-1Q99MA9 Gm7117-201ENSMUST00000071515 387 ntBASIC4.21□□□□□ -1.74
Nkx6-1Q99MA9 Mir132-201ENSMUST00000083603 66 ntBASIC4.21□□□□□ -1.74
Nkx6-1Q99MA9 Gm8074-201ENSMUST00000095071 252 ntBASIC4.21□□□□□ -1.74
Nkx6-1Q99MA9 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Nkx6-1Q99MA9 Gm43888-201ENSMUST00000204405 2587 ntBASIC4.21□□□□□ -1.74
Nkx6-1Q99MA9 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
Nkx6-1Q99MA9 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC4.21□□□□□ -1.74
Nkx6-1Q99MA9 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
Nkx6-1Q99MA9 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.74
Nkx6-1Q99MA9 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Nkx6-1Q99MA9 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Nkx6-1Q99MA9 Gm36298-201ENSMUST00000223394 1732 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms