Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Gm25958-201ENSMUST00000175114 71 ntBASIC1.39□□□□□ -2.19
Cspg4Q8VHY0 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
Cspg4Q8VHY0 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
Cspg4Q8VHY0 Gm6651-201ENSMUST00000189471 271 ntBASIC1.39□□□□□ -2.19
Cspg4Q8VHY0 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC1.39□□□□□ -2.19
Cspg4Q8VHY0 Gm45687-201ENSMUST00000209454 155 ntBASIC1.39□□□□□ -2.19
Cspg4Q8VHY0 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC1.39□□□□□ -2.19
Cspg4Q8VHY0 CT030166.3-201ENSMUST00000223203 193 ntBASIC1.39□□□□□ -2.19
Cspg4Q8VHY0 Gm26473-201ENSMUST00000116763 127 ntBASIC1.39□□□□□ -2.19
Cspg4Q8VHY0 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
Cspg4Q8VHY0 Gm25520-201ENSMUST00000158389 118 ntBASIC1.39□□□□□ -2.19
Cspg4Q8VHY0 Gm23008-201ENSMUST00000158946 80 ntBASIC1.39□□□□□ -2.19
Cspg4Q8VHY0 Gm29658-201ENSMUST00000185404 230 ntBASIC1.39□□□□□ -2.19
Cspg4Q8VHY0 Gm37119-201ENSMUST00000195691 389 ntBASIC1.39□□□□□ -2.19
Cspg4Q8VHY0 Gm43489-201ENSMUST00000196810 993 ntBASIC1.39□□□□□ -2.19
Cspg4Q8VHY0 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC1.39□□□□□ -2.19
Cspg4Q8VHY0 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Cspg4Q8VHY0 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
Cspg4Q8VHY0 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Cspg4Q8VHY0 Gm24381-201ENSMUST00000122697 104 ntBASIC1.38□□□□□ -2.19
Cspg4Q8VHY0 Gm26049-201ENSMUST00000157313 108 ntBASIC1.38□□□□□ -2.19
Cspg4Q8VHY0 Gm23583-201ENSMUST00000158533 289 ntBASIC1.38□□□□□ -2.19
Cspg4Q8VHY0 Gm22665-201ENSMUST00000158720 275 ntBASIC1.38□□□□□ -2.19
Cspg4Q8VHY0 Gm2855-201ENSMUST00000166765 456 ntBASIC1.38□□□□□ -2.19
Cspg4Q8VHY0 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC1.38□□□□□ -2.19
Cspg4Q8VHY0 Gm27864-201ENSMUST00000183704 190 ntBASIC1.38□□□□□ -2.19
Cspg4Q8VHY0 Gm27155-201ENSMUST00000183716 898 ntBASIC1.38□□□□□ -2.19
Cspg4Q8VHY0 Gm22897-201ENSMUST00000197860 128 ntBASIC1.38□□□□□ -2.19
Cspg4Q8VHY0 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC1.38□□□□□ -2.19
Cspg4Q8VHY0 AC135019.1-201ENSMUST00000219949 307 ntBASIC1.38□□□□□ -2.19
Cspg4Q8VHY0 AC116656.1-201ENSMUST00000227040 755 ntBASIC1.38□□□□□ -2.19
Cspg4Q8VHY0 Olfr815-201ENSMUST00000071557 951 ntBASIC1.38□□□□□ -2.19
Cspg4Q8VHY0 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Cspg4Q8VHY0 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
Cspg4Q8VHY0 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Cspg4Q8VHY0 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Cspg4Q8VHY0 Gm25728-201ENSMUST00000104525 159 ntBASIC1.38□□□□□ -2.19
Cspg4Q8VHY0 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
Cspg4Q8VHY0 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC1.38□□□□□ -2.19
Cspg4Q8VHY0 Gm14986-201ENSMUST00000121262 1002 ntBASIC1.38□□□□□ -2.19
Cspg4Q8VHY0 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC1.38□□□□□ -2.19
Cspg4Q8VHY0 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
Cspg4Q8VHY0 Gm29553-201ENSMUST00000189692 279 ntBASIC1.38□□□□□ -2.19
Cspg4Q8VHY0 Gm18341-201ENSMUST00000197538 622 ntBASIC1.38□□□□□ -2.19
Cspg4Q8VHY0 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
Cspg4Q8VHY0 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC1.38□□□□□ -2.19
Cspg4Q8VHY0 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Cspg4Q8VHY0 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
Cspg4Q8VHY0 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
Cspg4Q8VHY0 Gm22780-201ENSMUST00000104084 132 ntBASIC1.37□□□□□ -2.19
Cspg4Q8VHY0 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC1.37□□□□□ -2.19
Cspg4Q8VHY0 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
Cspg4Q8VHY0 Gm45049-201ENSMUST00000207586 591 ntBASIC1.37□□□□□ -2.19
Cspg4Q8VHY0 AC113031.4-201ENSMUST00000228381 514 ntBASIC1.37□□□□□ -2.19
Cspg4Q8VHY0 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
Cspg4Q8VHY0 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC1.37□□□□□ -2.19
Cspg4Q8VHY0 n-R5s191-201ENSMUST00000122724 116 ntBASIC1.37□□□□□ -2.19
Cspg4Q8VHY0 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
Cspg4Q8VHY0 Gm27520-201ENSMUST00000184872 81 ntBASIC1.37□□□□□ -2.19
Cspg4Q8VHY0 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
Cspg4Q8VHY0 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
Cspg4Q8VHY0 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC1.37□□□□□ -2.19
Cspg4Q8VHY0 Gm38167-201ENSMUST00000195704 1178 ntBASIC1.37□□□□□ -2.19
Cspg4Q8VHY0 Gm45192-201ENSMUST00000206749 283 ntBASIC1.37□□□□□ -2.19
Cspg4Q8VHY0 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC1.37□□□□□ -2.19
Cspg4Q8VHY0 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC1.37□□□□□ -2.19
Cspg4Q8VHY0 Gm14797-201ENSMUST00000119378 1480 ntBASIC1.37□□□□□ -2.19
Cspg4Q8VHY0 Gm13460-201ENSMUST00000121274 353 ntBASIC1.36□□□□□ -2.19
Cspg4Q8VHY0 Gm5929-201ENSMUST00000166883 487 ntBASIC1.36□□□□□ -2.19
Cspg4Q8VHY0 Gm19057-201ENSMUST00000194329 1197 ntBASIC1.36□□□□□ -2.19
Cspg4Q8VHY0 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
Cspg4Q8VHY0 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
Cspg4Q8VHY0 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
Cspg4Q8VHY0 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
Cspg4Q8VHY0 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
Cspg4Q8VHY0 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
Cspg4Q8VHY0 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
Cspg4Q8VHY0 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.35□□□□□ -2.19
Cspg4Q8VHY0 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Cspg4Q8VHY0 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC1.35□□□□□ -2.19
Cspg4Q8VHY0 Gm23991-201ENSMUST00000117033 93 ntBASIC1.35□□□□□ -2.19
Cspg4Q8VHY0 Gm14537-201ENSMUST00000117464 599 ntBASIC1.35□□□□□ -2.19
Cspg4Q8VHY0 Gm37037-201ENSMUST00000194475 424 ntBASIC1.35□□□□□ -2.19
Cspg4Q8VHY0 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC1.35□□□□□ -2.19
Cspg4Q8VHY0 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
Cspg4Q8VHY0 Gm23517-201ENSMUST00000082830 192 ntBASIC1.35□□□□□ -2.19
Cspg4Q8VHY0 Gm20679-201ENSMUST00000177285 1402 ntBASIC1.35□□□□□ -2.19
Cspg4Q8VHY0 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
Cspg4Q8VHY0 Gm24579-201ENSMUST00000103964 144 ntBASIC1.35□□□□□ -2.19
Cspg4Q8VHY0 Gm22026-201ENSMUST00000122735 281 ntBASIC1.35□□□□□ -2.19
Cspg4Q8VHY0 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC1.35□□□□□ -2.19
Cspg4Q8VHY0 Gm25669-201ENSMUST00000157699 112 ntBASIC1.35□□□□□ -2.19
Cspg4Q8VHY0 Gm23505-201ENSMUST00000158989 130 ntBASIC1.35□□□□□ -2.19
Cspg4Q8VHY0 Gm27979-201ENSMUST00000185126 56 ntBASIC1.35□□□□□ -2.19
Cspg4Q8VHY0 Gm29597-201ENSMUST00000188035 308 ntBASIC1.35□□□□□ -2.19
Cspg4Q8VHY0 Mir7232-201ENSMUST00000197929 74 ntBASIC1.35□□□□□ -2.19
Cspg4Q8VHY0 Gm15235-201ENSMUST00000200572 194 ntBASIC1.35□□□□□ -2.19
Cspg4Q8VHY0 Gm10794-201ENSMUST00000099624 207 ntBASIC1.35□□□□□ -2.19
Cspg4Q8VHY0 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Cspg4Q8VHY0 Gm45130-201ENSMUST00000207574 3388 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms