Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ndc1Q8VCB1 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ndc1Q8VCB1 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ndc1Q8VCB1 Gm37345-201ENSMUST00000193062 3138 ntBASIC4.01□□□□□ -1.77
Ndc1Q8VCB1 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
Ndc1Q8VCB1 Gm24079-201ENSMUST00000104352 132 ntBASIC4.01□□□□□ -1.77
Ndc1Q8VCB1 Gm22496-201ENSMUST00000104493 88 ntBASIC4.01□□□□□ -1.77
Ndc1Q8VCB1 Mir875-201ENSMUST00000104698 78 ntBASIC4.01□□□□□ -1.77
Ndc1Q8VCB1 Gm22488-201ENSMUST00000116811 127 ntBASIC4.01□□□□□ -1.77
Ndc1Q8VCB1 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC4.01□□□□□ -1.77
Ndc1Q8VCB1 Gm15994-201ENSMUST00000118029 402 ntBASIC4.01□□□□□ -1.77
Ndc1Q8VCB1 Gm6274-201ENSMUST00000118173 797 ntBASIC4.01□□□□□ -1.77
Ndc1Q8VCB1 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC4.01□□□□□ -1.77
Ndc1Q8VCB1 Gm10059-201ENSMUST00000131139 171 ntBASIC4.01□□□□□ -1.77
Ndc1Q8VCB1 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC4.01□□□□□ -1.77
Ndc1Q8VCB1 Gm8289-201ENSMUST00000144814 1182 ntBASIC4.01□□□□□ -1.77
Ndc1Q8VCB1 Gm25386-201ENSMUST00000157814 288 ntBASIC4.01□□□□□ -1.77
Ndc1Q8VCB1 Gm25175-201ENSMUST00000178712 79 ntBASIC4.01□□□□□ -1.77
Ndc1Q8VCB1 Mir6481-201ENSMUST00000184617 110 ntBASIC4.01□□□□□ -1.77
Ndc1Q8VCB1 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC4.01□□□□□ -1.77
Ndc1Q8VCB1 Gm44032-201ENSMUST00000204841 166 ntBASIC4.01□□□□□ -1.77
Ndc1Q8VCB1 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Ndc1Q8VCB1 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC4.01□□□□□ -1.77
Ndc1Q8VCB1 CT025536.1-201ENSMUST00000226744 844 ntBASIC4.01□□□□□ -1.77
Ndc1Q8VCB1 AC074315.1-201ENSMUST00000228801 214 ntBASIC4.01□□□□□ -1.77
Ndc1Q8VCB1 AC164437.2-201ENSMUST00000228915 797 ntBASIC4.01□□□□□ -1.77
Ndc1Q8VCB1 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
Ndc1Q8VCB1 Gm23055-201ENSMUST00000082805 94 ntBASIC4.01□□□□□ -1.77
Ndc1Q8VCB1 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
Ndc1Q8VCB1 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ndc1Q8VCB1 AC156025.1-201ENSMUST00000223597 3551 ntBASIC4.01□□□□□ -1.77
Ndc1Q8VCB1 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ndc1Q8VCB1 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.01□□□□□ -1.77
Ndc1Q8VCB1 Gm36969-201ENSMUST00000194551 2809 ntBASIC4.01□□□□□ -1.77
Ndc1Q8VCB1 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC4.01□□□□□ -1.77
Ndc1Q8VCB1 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ndc1Q8VCB1 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Ndc1Q8VCB1 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Ndc1Q8VCB1 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Ndc1Q8VCB1 Gm45137-201ENSMUST00000208652 4415 ntBASIC4.01□□□□□ -1.77
Ndc1Q8VCB1 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC4□□□□□ -1.77
Ndc1Q8VCB1 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
Ndc1Q8VCB1 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
Ndc1Q8VCB1 Gm5248-201ENSMUST00000186108 4046 ntBASIC4□□□□□ -1.77
Ndc1Q8VCB1 Gm37879-201ENSMUST00000193112 1995 ntBASIC4□□□□□ -1.77
Ndc1Q8VCB1 Gm14806-201ENSMUST00000116606 2110 ntBASIC4□□□□□ -1.77
Ndc1Q8VCB1 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Ndc1Q8VCB1 AC160130.1-201ENSMUST00000220734 2735 ntBASIC4□□□□□ -1.77
Ndc1Q8VCB1 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Ndc1Q8VCB1 Gm22758-201ENSMUST00000102275 96 ntBASIC4□□□□□ -1.77
Ndc1Q8VCB1 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Ndc1Q8VCB1 Gm16242-201ENSMUST00000117741 334 ntBASIC4□□□□□ -1.77
Ndc1Q8VCB1 Gm15215-201ENSMUST00000117773 489 ntBASIC4□□□□□ -1.77
Ndc1Q8VCB1 Gm13880-201ENSMUST00000118421 474 ntBASIC4□□□□□ -1.77
Ndc1Q8VCB1 Gm22453-201ENSMUST00000122801 318 ntBASIC4□□□□□ -1.77
Ndc1Q8VCB1 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC4□□□□□ -1.77
Ndc1Q8VCB1 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC4□□□□□ -1.77
Ndc1Q8VCB1 Gm14298-201ENSMUST00000139032 237 ntBASIC4□□□□□ -1.77
Ndc1Q8VCB1 Gm16356-201ENSMUST00000143300 169 ntBASIC4□□□□□ -1.77
Ndc1Q8VCB1 Gm23554-201ENSMUST00000157818 110 ntBASIC4□□□□□ -1.77
Ndc1Q8VCB1 Gm22098-201ENSMUST00000157930 85 ntBASIC4□□□□□ -1.77
Ndc1Q8VCB1 Gm23704-201ENSMUST00000158844 340 ntBASIC4□□□□□ -1.77
Ndc1Q8VCB1 Gm17109-201ENSMUST00000163985 358 ntBASIC4□□□□□ -1.77
Ndc1Q8VCB1 Gm23415-201ENSMUST00000175519 83 ntBASIC4□□□□□ -1.77
Ndc1Q8VCB1 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC4□□□□□ -1.77
Ndc1Q8VCB1 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC4□□□□□ -1.77
Ndc1Q8VCB1 Gm43586-201ENSMUST00000195948 310 ntBASIC4□□□□□ -1.77
Ndc1Q8VCB1 Igkv4-65-201ENSMUST00000196986 358 ntBASIC4□□□□□ -1.77
Ndc1Q8VCB1 Gm25203-202ENSMUST00000200458 216 ntBASIC4□□□□□ -1.77
Ndc1Q8VCB1 Gm43925-201ENSMUST00000203498 206 ntBASIC4□□□□□ -1.77
Ndc1Q8VCB1 Gm44853-201ENSMUST00000209070 250 ntBASIC4□□□□□ -1.77
Ndc1Q8VCB1 Gm45403-201ENSMUST00000209453 276 ntBASIC4□□□□□ -1.77
Ndc1Q8VCB1 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC4□□□□□ -1.77
Ndc1Q8VCB1 Gm8942-201ENSMUST00000217892 400 ntBASIC4□□□□□ -1.77
Ndc1Q8VCB1 AC129541.1-201ENSMUST00000226940 523 ntBASIC4□□□□□ -1.77
Ndc1Q8VCB1 Gm25203-201ENSMUST00000082842 215 ntBASIC4□□□□□ -1.77
Ndc1Q8VCB1 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC4□□□□□ -1.77
Ndc1Q8VCB1 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
Ndc1Q8VCB1 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
Ndc1Q8VCB1 AC122840.2-201ENSMUST00000221030 2659 ntBASIC4□□□□□ -1.77
Ndc1Q8VCB1 AC153964.1-201ENSMUST00000219677 3142 ntBASIC4□□□□□ -1.77
Ndc1Q8VCB1 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC4□□□□□ -1.77
Ndc1Q8VCB1 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC4□□□□□ -1.77
Ndc1Q8VCB1 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Ndc1Q8VCB1 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Ndc1Q8VCB1 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.99□□□□□ -1.77
Ndc1Q8VCB1 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Ndc1Q8VCB1 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Ndc1Q8VCB1 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Ndc1Q8VCB1 Mir551b-201ENSMUST00000102165 98 ntBASIC3.99□□□□□ -1.77
Ndc1Q8VCB1 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Ndc1Q8VCB1 Gm12805-201ENSMUST00000117305 1048 ntBASIC3.99□□□□□ -1.77
Ndc1Q8VCB1 Gm13873-201ENSMUST00000119208 427 ntBASIC3.99□□□□□ -1.77
Ndc1Q8VCB1 Gm11693-201ENSMUST00000119625 565 ntBASIC3.99□□□□□ -1.77
Ndc1Q8VCB1 Gm11718-201ENSMUST00000119942 537 ntBASIC3.99□□□□□ -1.77
Ndc1Q8VCB1 Gm13725-201ENSMUST00000122139 207 ntBASIC3.99□□□□□ -1.77
Ndc1Q8VCB1 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC3.99□□□□□ -1.77
Ndc1Q8VCB1 Gm13092-201ENSMUST00000136346 260 ntBASIC3.99□□□□□ -1.77
Ndc1Q8VCB1 Gm25965-201ENSMUST00000157170 93 ntBASIC3.99□□□□□ -1.77
Ndc1Q8VCB1 Gm27926-201ENSMUST00000157180 66 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 100.1 ms