Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm45245-201ENSMUST00000210082 376 ntBASIC4.23□□□□□ -1.73
Ushbp1Q8R370 Gm45327-201ENSMUST00000211612 565 ntBASIC4.23□□□□□ -1.73
Ushbp1Q8R370 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC4.23□□□□□ -1.73
Ushbp1Q8R370 AC153506.2-201ENSMUST00000218051 257 ntBASIC4.23□□□□□ -1.73
Ushbp1Q8R370 AC162934.1-201ENSMUST00000222880 309 ntBASIC4.23□□□□□ -1.73
Ushbp1Q8R370 AC134420.1-201ENSMUST00000227027 289 ntBASIC4.23□□□□□ -1.73
Ushbp1Q8R370 Gm22304-201ENSMUST00000082688 129 ntBASIC4.23□□□□□ -1.73
Ushbp1Q8R370 Gm25579-201ENSMUST00000083407 106 ntBASIC4.23□□□□□ -1.73
Ushbp1Q8R370 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC4.23□□□□□ -1.73
Ushbp1Q8R370 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Ushbp1Q8R370 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Ushbp1Q8R370 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Ushbp1Q8R370 Gm18609-201ENSMUST00000203370 3601 ntBASIC4.23□□□□□ -1.73
Ushbp1Q8R370 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
Ushbp1Q8R370 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Ushbp1Q8R370 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Ushbp1Q8R370 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Ushbp1Q8R370 Gm37661-201ENSMUST00000191863 1550 ntBASIC4.23□□□□□ -1.73
Ushbp1Q8R370 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Ushbp1Q8R370 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
Ushbp1Q8R370 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Ushbp1Q8R370 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Ushbp1Q8R370 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Ushbp1Q8R370 Gm25272-201ENSMUST00000104293 128 ntBASIC4.22□□□□□ -1.73
Ushbp1Q8R370 Gm24889-201ENSMUST00000104388 132 ntBASIC4.22□□□□□ -1.73
Ushbp1Q8R370 Gm14355-201ENSMUST00000117352 264 ntBASIC4.22□□□□□ -1.73
Ushbp1Q8R370 Gm15180-201ENSMUST00000117745 492 ntBASIC4.22□□□□□ -1.73
Ushbp1Q8R370 Gm14868-201ENSMUST00000117840 216 ntBASIC4.22□□□□□ -1.73
Ushbp1Q8R370 Gm9059-201ENSMUST00000118319 183 ntBASIC4.22□□□□□ -1.73
Ushbp1Q8R370 Gm12803-201ENSMUST00000118907 821 ntBASIC4.22□□□□□ -1.73
Ushbp1Q8R370 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC4.22□□□□□ -1.73
Ushbp1Q8R370 Gm12872-201ENSMUST00000121835 320 ntBASIC4.22□□□□□ -1.73
Ushbp1Q8R370 Gm22479-201ENSMUST00000122566 81 ntBASIC4.22□□□□□ -1.73
Ushbp1Q8R370 Gm24385-201ENSMUST00000122694 350 ntBASIC4.22□□□□□ -1.73
Ushbp1Q8R370 Gm14333-201ENSMUST00000130484 264 ntBASIC4.22□□□□□ -1.73
Ushbp1Q8R370 Gm25436-201ENSMUST00000158275 145 ntBASIC4.22□□□□□ -1.73
Ushbp1Q8R370 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC4.22□□□□□ -1.73
Ushbp1Q8R370 Gm23415-201ENSMUST00000175519 83 ntBASIC4.22□□□□□ -1.73
Ushbp1Q8R370 Gm10105-201ENSMUST00000184601 270 ntBASIC4.22□□□□□ -1.73
Ushbp1Q8R370 Gm28920-201ENSMUST00000189957 699 ntBASIC4.22□□□□□ -1.73
Ushbp1Q8R370 Gm19498-201ENSMUST00000191128 331 ntBASIC4.22□□□□□ -1.73
Ushbp1Q8R370 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC4.22□□□□□ -1.73
Ushbp1Q8R370 Gm43829-201ENSMUST00000196191 3802 ntBASIC4.22□□□□□ -1.73
Ushbp1Q8R370 Gm18423-201ENSMUST00000205144 1074 ntBASIC4.22□□□□□ -1.73
Ushbp1Q8R370 Gm17989-201ENSMUST00000211543 412 ntBASIC4.22□□□□□ -1.73
Ushbp1Q8R370 AC164567.2-201ENSMUST00000219363 445 ntBASIC4.22□□□□□ -1.73
Ushbp1Q8R370 Gm46193-201ENSMUST00000219399 364 ntBASIC4.22□□□□□ -1.73
Ushbp1Q8R370 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Ushbp1Q8R370 Gm24626-201ENSMUST00000082621 161 ntBASIC4.22□□□□□ -1.73
Ushbp1Q8R370 Gm8074-201ENSMUST00000095071 252 ntBASIC4.22□□□□□ -1.73
Ushbp1Q8R370 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
Ushbp1Q8R370 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Ushbp1Q8R370 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
Ushbp1Q8R370 Gm42536-201ENSMUST00000197562 1613 ntBASIC4.21□□□□□ -1.73
Ushbp1Q8R370 AC115047.2-201ENSMUST00000214421 1848 ntBASIC4.21□□□□□ -1.74
Ushbp1Q8R370 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Ushbp1Q8R370 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Ushbp1Q8R370 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Ushbp1Q8R370 Gm22115-201ENSMUST00000103976 133 ntBASIC4.21□□□□□ -1.74
Ushbp1Q8R370 Gm23923-201ENSMUST00000104108 133 ntBASIC4.21□□□□□ -1.74
Ushbp1Q8R370 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC4.21□□□□□ -1.74
Ushbp1Q8R370 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC4.21□□□□□ -1.74
Ushbp1Q8R370 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Ushbp1Q8R370 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Ushbp1Q8R370 Gm25621-201ENSMUST00000157223 114 ntBASIC4.21□□□□□ -1.74
Ushbp1Q8R370 Gm22531-201ENSMUST00000158819 140 ntBASIC4.21□□□□□ -1.74
Ushbp1Q8R370 Gm8532-201ENSMUST00000179174 461 ntBASIC4.21□□□□□ -1.74
Ushbp1Q8R370 Gm27385-201ENSMUST00000184747 104 ntBASIC4.21□□□□□ -1.74
Ushbp1Q8R370 Gm19637-201ENSMUST00000185933 579 ntBASIC4.21□□□□□ -1.74
Ushbp1Q8R370 Gm28418-201ENSMUST00000186179 423 ntBASIC4.21□□□□□ -1.74
Ushbp1Q8R370 Gm7858-201ENSMUST00000190177 622 ntBASIC4.21□□□□□ -1.74
Ushbp1Q8R370 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC4.21□□□□□ -1.74
Ushbp1Q8R370 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC4.21□□□□□ -1.74
Ushbp1Q8R370 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC4.21□□□□□ -1.74
Ushbp1Q8R370 Gm44208-201ENSMUST00000205199 421 ntBASIC4.21□□□□□ -1.74
Ushbp1Q8R370 AC132465.3-201ENSMUST00000219326 195 ntBASIC4.21□□□□□ -1.74
Ushbp1Q8R370 Gm3829-201ENSMUST00000222362 619 ntBASIC4.21□□□□□ -1.74
Ushbp1Q8R370 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Ushbp1Q8R370 Gm22245-201ENSMUST00000082479 103 ntBASIC4.21□□□□□ -1.74
Ushbp1Q8R370 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Ushbp1Q8R370 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC4.21□□□□□ -1.74
Ushbp1Q8R370 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC4.21□□□□□ -1.74
Ushbp1Q8R370 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Ushbp1Q8R370 AC124572.2-201ENSMUST00000218041 5152 ntBASIC4.2□□□□□ -1.74
Ushbp1Q8R370 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Ushbp1Q8R370 Gm8217-201ENSMUST00000119136 465 ntBASIC4.2□□□□□ -1.74
Ushbp1Q8R370 Gm11229-201ENSMUST00000121993 437 ntBASIC4.2□□□□□ -1.74
Ushbp1Q8R370 Gm15147-201ENSMUST00000122263 483 ntBASIC4.2□□□□□ -1.74
Ushbp1Q8R370 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC4.2□□□□□ -1.74
Ushbp1Q8R370 Gm25535-201ENSMUST00000175364 125 ntBASIC4.2□□□□□ -1.74
Ushbp1Q8R370 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC4.2□□□□□ -1.74
Ushbp1Q8R370 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC4.2□□□□□ -1.74
Ushbp1Q8R370 Gm24464-201ENSMUST00000179697 107 ntBASIC4.2□□□□□ -1.74
Ushbp1Q8R370 Mir7676-1-201ENSMUST00000183491 62 ntBASIC4.2□□□□□ -1.74
Ushbp1Q8R370 Mir7676-2-201ENSMUST00000183523 62 ntBASIC4.2□□□□□ -1.74
Ushbp1Q8R370 Gm28008-201ENSMUST00000184021 186 ntBASIC4.2□□□□□ -1.74
Ushbp1Q8R370 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC4.2□□□□□ -1.74
Ushbp1Q8R370 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC4.2□□□□□ -1.74
Ushbp1Q8R370 Gm37313-201ENSMUST00000191673 290 ntBASIC4.2□□□□□ -1.74
Ushbp1Q8R370 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 100.2 ms