Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm14596-201ENSMUST00000180268 537 ntBASIC3.08□□□□□ -1.92
Ccdc38Q8CDN8 Gm14595-201ENSMUST00000180335 537 ntBASIC3.08□□□□□ -1.92
Ccdc38Q8CDN8 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC3.08□□□□□ -1.92
Ccdc38Q8CDN8 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Ccdc38Q8CDN8 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Ccdc38Q8CDN8 Gm42924-201ENSMUST00000197261 185 ntBASIC3.08□□□□□ -1.92
Ccdc38Q8CDN8 Gm43217-201ENSMUST00000199513 367 ntBASIC3.08□□□□□ -1.92
Ccdc38Q8CDN8 Igkv11-114-201ENSMUST00000200013 346 ntBASIC3.08□□□□□ -1.92
Ccdc38Q8CDN8 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC3.08□□□□□ -1.92
Ccdc38Q8CDN8 CT030159.4-201ENSMUST00000221966 395 ntBASIC3.08□□□□□ -1.92
Ccdc38Q8CDN8 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC3.08□□□□□ -1.92
Ccdc38Q8CDN8 AC158395.1-201ENSMUST00000227206 452 ntBASIC3.08□□□□□ -1.92
Ccdc38Q8CDN8 AC133076.1-201ENSMUST00000228074 484 ntBASIC3.08□□□□□ -1.92
Ccdc38Q8CDN8 Gm25856-201ENSMUST00000082786 75 ntBASIC3.08□□□□□ -1.92
Ccdc38Q8CDN8 Gm23448-201ENSMUST00000083151 104 ntBASIC3.08□□□□□ -1.92
Ccdc38Q8CDN8 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC3.08□□□□□ -1.92
Ccdc38Q8CDN8 Gm42785-201ENSMUST00000202316 3835 ntBASIC3.08□□□□□ -1.92
Ccdc38Q8CDN8 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
Ccdc38Q8CDN8 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Ccdc38Q8CDN8 Gm45104-201ENSMUST00000208748 4350 ntBASIC3.07□□□□□ -1.92
Ccdc38Q8CDN8 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Ccdc38Q8CDN8 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC3.07□□□□□ -1.92
Ccdc38Q8CDN8 Gm14897-201ENSMUST00000118213 207 ntBASIC3.07□□□□□ -1.92
Ccdc38Q8CDN8 Gm12640-201ENSMUST00000120097 310 ntBASIC3.07□□□□□ -1.92
Ccdc38Q8CDN8 Gm2768-201ENSMUST00000121062 250 ntBASIC3.07□□□□□ -1.92
Ccdc38Q8CDN8 Gm14101-201ENSMUST00000121502 473 ntBASIC3.07□□□□□ -1.92
Ccdc38Q8CDN8 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC3.07□□□□□ -1.92
Ccdc38Q8CDN8 Gm26101-201ENSMUST00000157246 105 ntBASIC3.07□□□□□ -1.92
Ccdc38Q8CDN8 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC3.07□□□□□ -1.92
Ccdc38Q8CDN8 Snord53-201ENSMUST00000175146 78 ntBASIC3.07□□□□□ -1.92
Ccdc38Q8CDN8 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC3.07□□□□□ -1.92
Ccdc38Q8CDN8 Gm24897-201ENSMUST00000179033 107 ntBASIC3.07□□□□□ -1.92
Ccdc38Q8CDN8 Gm21726-201ENSMUST00000179654 392 ntBASIC3.07□□□□□ -1.92
Ccdc38Q8CDN8 Gm8816-201ENSMUST00000182280 1163 ntBASIC3.07□□□□□ -1.92
Ccdc38Q8CDN8 Gm27330-201ENSMUST00000184689 132 ntBASIC3.07□□□□□ -1.92
Ccdc38Q8CDN8 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC3.07□□□□□ -1.92
Ccdc38Q8CDN8 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC3.07□□□□□ -1.92
Ccdc38Q8CDN8 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC3.07□□□□□ -1.92
Ccdc38Q8CDN8 Gm37709-201ENSMUST00000195074 600 ntBASIC3.07□□□□□ -1.92
Ccdc38Q8CDN8 Gm43652-201ENSMUST00000196219 675 ntBASIC3.07□□□□□ -1.92
Ccdc38Q8CDN8 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Ccdc38Q8CDN8 Gm44903-201ENSMUST00000206840 130 ntBASIC3.07□□□□□ -1.92
Ccdc38Q8CDN8 AC168266.1-201ENSMUST00000216024 226 ntBASIC3.07□□□□□ -1.92
Ccdc38Q8CDN8 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC3.07□□□□□ -1.92
Ccdc38Q8CDN8 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
Ccdc38Q8CDN8 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Ccdc38Q8CDN8 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Ccdc38Q8CDN8 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Ccdc38Q8CDN8 Gm22023-201ENSMUST00000104354 130 ntBASIC3.06□□□□□ -1.92
Ccdc38Q8CDN8 Gm14411-201ENSMUST00000121798 914 ntBASIC3.06□□□□□ -1.92
Ccdc38Q8CDN8 Gm24681-201ENSMUST00000158760 107 ntBASIC3.06□□□□□ -1.92
Ccdc38Q8CDN8 Gm17166-201ENSMUST00000172006 431 ntBASIC3.06□□□□□ -1.92
Ccdc38Q8CDN8 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC3.06□□□□□ -1.92
Ccdc38Q8CDN8 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC3.06□□□□□ -1.92
Ccdc38Q8CDN8 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC3.06□□□□□ -1.92
Ccdc38Q8CDN8 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Ccdc38Q8CDN8 Gm27659-201ENSMUST00000183472 98 ntBASIC3.06□□□□□ -1.92
Ccdc38Q8CDN8 Mir6541-201ENSMUST00000183649 110 ntBASIC3.06□□□□□ -1.92
Ccdc38Q8CDN8 Mir6383-201ENSMUST00000184545 116 ntBASIC3.06□□□□□ -1.92
Ccdc38Q8CDN8 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC3.06□□□□□ -1.92
Ccdc38Q8CDN8 Gm18403-201ENSMUST00000192907 529 ntBASIC3.06□□□□□ -1.92
Ccdc38Q8CDN8 Gm19147-201ENSMUST00000199622 652 ntBASIC3.06□□□□□ -1.92
Ccdc38Q8CDN8 Gm43810-201ENSMUST00000201018 232 ntBASIC3.06□□□□□ -1.92
Ccdc38Q8CDN8 Gm43026-201ENSMUST00000202972 325 ntBASIC3.06□□□□□ -1.92
Ccdc38Q8CDN8 Gm44830-201ENSMUST00000207667 584 ntBASIC3.06□□□□□ -1.92
Ccdc38Q8CDN8 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC3.06□□□□□ -1.92
Ccdc38Q8CDN8 AC117588.2-201ENSMUST00000228340 311 ntBASIC3.06□□□□□ -1.92
Ccdc38Q8CDN8 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Ccdc38Q8CDN8 Gm24707-201ENSMUST00000082812 107 ntBASIC3.06□□□□□ -1.92
Ccdc38Q8CDN8 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Ccdc38Q8CDN8 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
Ccdc38Q8CDN8 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Ccdc38Q8CDN8 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
Ccdc38Q8CDN8 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Ccdc38Q8CDN8 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Ccdc38Q8CDN8 Mir190b-201ENSMUST00000104803 80 ntBASIC3.05□□□□□ -1.92
Ccdc38Q8CDN8 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC3.05□□□□□ -1.92
Ccdc38Q8CDN8 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC3.05□□□□□ -1.92
Ccdc38Q8CDN8 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC3.05□□□□□ -1.92
Ccdc38Q8CDN8 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
Ccdc38Q8CDN8 Gm28560-201ENSMUST00000186091 315 ntBASIC3.05□□□□□ -1.92
Ccdc38Q8CDN8 Gm28334-201ENSMUST00000186653 315 ntBASIC3.05□□□□□ -1.92
Ccdc38Q8CDN8 Gm28495-201ENSMUST00000188452 315 ntBASIC3.05□□□□□ -1.92
Ccdc38Q8CDN8 Gm28232-201ENSMUST00000188683 315 ntBASIC3.05□□□□□ -1.92
Ccdc38Q8CDN8 Gm28481-201ENSMUST00000189231 315 ntBASIC3.05□□□□□ -1.92
Ccdc38Q8CDN8 Gm29059-201ENSMUST00000191534 315 ntBASIC3.05□□□□□ -1.92
Ccdc38Q8CDN8 Gm37765-201ENSMUST00000192395 315 ntBASIC3.05□□□□□ -1.92
Ccdc38Q8CDN8 Gm37237-201ENSMUST00000192893 315 ntBASIC3.05□□□□□ -1.92
Ccdc38Q8CDN8 Gm36968-201ENSMUST00000193737 315 ntBASIC3.05□□□□□ -1.92
Ccdc38Q8CDN8 Gm38290-201ENSMUST00000195238 315 ntBASIC3.05□□□□□ -1.92
Ccdc38Q8CDN8 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC3.05□□□□□ -1.92
Ccdc38Q8CDN8 Gm45173-201ENSMUST00000206819 305 ntBASIC3.05□□□□□ -1.92
Ccdc38Q8CDN8 Gm29817-201ENSMUST00000210098 172 ntBASIC3.05□□□□□ -1.92
Ccdc38Q8CDN8 AC107453.2-201ENSMUST00000227714 655 ntBASIC3.05□□□□□ -1.92
Ccdc38Q8CDN8 AC147628.1-201ENSMUST00000228193 688 ntBASIC3.05□□□□□ -1.92
Ccdc38Q8CDN8 AC131029.2-202ENSMUST00000228430 496 ntBASIC3.05□□□□□ -1.92
Ccdc38Q8CDN8 Mir423-201ENSMUST00000083584 109 ntBASIC3.05□□□□□ -1.92
Ccdc38Q8CDN8 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Ccdc38Q8CDN8 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
Ccdc38Q8CDN8 CT009504.1-201ENSMUST00000218252 3330 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms