Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm16005-201ENSMUST00000120515 269 ntBASIC4.15□□□□□ -1.75
Vps53Q8CCB4 Gm26255-201ENSMUST00000122492 103 ntBASIC4.15□□□□□ -1.75
Vps53Q8CCB4 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Vps53Q8CCB4 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC4.15□□□□□ -1.75
Vps53Q8CCB4 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Vps53Q8CCB4 Gm24968-201ENSMUST00000179817 107 ntBASIC4.15□□□□□ -1.75
Vps53Q8CCB4 Gm27445-201ENSMUST00000184484 72 ntBASIC4.15□□□□□ -1.75
Vps53Q8CCB4 Mir7062-201ENSMUST00000185038 66 ntBASIC4.15□□□□□ -1.75
Vps53Q8CCB4 Gm36934-201ENSMUST00000192007 306 ntBASIC4.15□□□□□ -1.75
Vps53Q8CCB4 Gm43624-201ENSMUST00000197368 180 ntBASIC4.15□□□□□ -1.75
Vps53Q8CCB4 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC4.15□□□□□ -1.75
Vps53Q8CCB4 Gm43976-201ENSMUST00000203637 235 ntBASIC4.15□□□□□ -1.75
Vps53Q8CCB4 Gm44687-201ENSMUST00000204975 235 ntBASIC4.15□□□□□ -1.75
Vps53Q8CCB4 Gm44609-201ENSMUST00000207157 460 ntBASIC4.15□□□□□ -1.75
Vps53Q8CCB4 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC4.15□□□□□ -1.75
Vps53Q8CCB4 AC125020.2-201ENSMUST00000218894 348 ntBASIC4.15□□□□□ -1.75
Vps53Q8CCB4 AC166358.10-201ENSMUST00000220556 144 ntBASIC4.15□□□□□ -1.75
Vps53Q8CCB4 AC132954.1-201ENSMUST00000221017 342 ntBASIC4.15□□□□□ -1.75
Vps53Q8CCB4 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC4.15□□□□□ -1.75
Vps53Q8CCB4 AC122341.1-201ENSMUST00000227291 560 ntBASIC4.15□□□□□ -1.75
Vps53Q8CCB4 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Vps53Q8CCB4 Gm11284-201ENSMUST00000121910 1887 ntBASIC4.15□□□□□ -1.75
Vps53Q8CCB4 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Vps53Q8CCB4 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Vps53Q8CCB4 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
Vps53Q8CCB4 AC137842.3-201ENSMUST00000228855 2397 ntBASIC4.14□□□□□ -1.75
Vps53Q8CCB4 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Vps53Q8CCB4 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC4.14□□□□□ -1.75
Vps53Q8CCB4 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Vps53Q8CCB4 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Vps53Q8CCB4 Gm7470-201ENSMUST00000194219 2095 ntBASIC4.14□□□□□ -1.75
Vps53Q8CCB4 Gm8473-201ENSMUST00000176697 1885 ntBASIC4.14□□□□□ -1.75
Vps53Q8CCB4 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Vps53Q8CCB4 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Vps53Q8CCB4 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC4.14□□□□□ -1.75
Vps53Q8CCB4 Gm24831-201ENSMUST00000116778 126 ntBASIC4.14□□□□□ -1.75
Vps53Q8CCB4 Gm11813-201ENSMUST00000118586 291 ntBASIC4.14□□□□□ -1.75
Vps53Q8CCB4 Gm24439-201ENSMUST00000157894 117 ntBASIC4.14□□□□□ -1.75
Vps53Q8CCB4 Gm25335-201ENSMUST00000158043 103 ntBASIC4.14□□□□□ -1.75
Vps53Q8CCB4 Gm22136-201ENSMUST00000158751 268 ntBASIC4.14□□□□□ -1.75
Vps53Q8CCB4 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC4.14□□□□□ -1.75
Vps53Q8CCB4 Snord92-201ENSMUST00000175548 85 ntBASIC4.14□□□□□ -1.75
Vps53Q8CCB4 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC4.14□□□□□ -1.75
Vps53Q8CCB4 Gm19641-201ENSMUST00000188432 417 ntBASIC4.14□□□□□ -1.75
Vps53Q8CCB4 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
Vps53Q8CCB4 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Vps53Q8CCB4 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC4.14□□□□□ -1.75
Vps53Q8CCB4 Gm45438-201ENSMUST00000210242 564 ntBASIC4.14□□□□□ -1.75
Vps53Q8CCB4 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC4.14□□□□□ -1.75
Vps53Q8CCB4 Mir133a-2-201ENSMUST00000083526 104 ntBASIC4.14□□□□□ -1.75
Vps53Q8CCB4 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Vps53Q8CCB4 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Vps53Q8CCB4 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Vps53Q8CCB4 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC4.13□□□□□ -1.75
Vps53Q8CCB4 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Vps53Q8CCB4 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Vps53Q8CCB4 Mir673-201ENSMUST00000102361 91 ntBASIC4.13□□□□□ -1.75
Vps53Q8CCB4 Gm11221-201ENSMUST00000117230 597 ntBASIC4.13□□□□□ -1.75
Vps53Q8CCB4 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC4.13□□□□□ -1.75
Vps53Q8CCB4 Gm12578-201ENSMUST00000121244 417 ntBASIC4.13□□□□□ -1.75
Vps53Q8CCB4 Gm11430-201ENSMUST00000121317 217 ntBASIC4.13□□□□□ -1.75
Vps53Q8CCB4 Gm14736-201ENSMUST00000121470 336 ntBASIC4.13□□□□□ -1.75
Vps53Q8CCB4 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC4.13□□□□□ -1.75
Vps53Q8CCB4 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC4.13□□□□□ -1.75
Vps53Q8CCB4 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Vps53Q8CCB4 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC4.13□□□□□ -1.75
Vps53Q8CCB4 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Vps53Q8CCB4 Gm24100-201ENSMUST00000178592 79 ntBASIC4.13□□□□□ -1.75
Vps53Q8CCB4 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Vps53Q8CCB4 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Vps53Q8CCB4 Gm26092-201ENSMUST00000179798 97 ntBASIC4.13□□□□□ -1.75
Vps53Q8CCB4 Gm24137-201ENSMUST00000180055 79 ntBASIC4.13□□□□□ -1.75
Vps53Q8CCB4 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Vps53Q8CCB4 Mir669a-1-201ENSMUST00000180238 97 ntBASIC4.13□□□□□ -1.75
Vps53Q8CCB4 Gm22391-201ENSMUST00000180356 79 ntBASIC4.13□□□□□ -1.75
Vps53Q8CCB4 Gm8816-201ENSMUST00000182280 1163 ntBASIC4.13□□□□□ -1.75
Vps53Q8CCB4 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC4.13□□□□□ -1.75
Vps53Q8CCB4 Mir6363-201ENSMUST00000184880 114 ntBASIC4.13□□□□□ -1.75
Vps53Q8CCB4 Gm28591-201ENSMUST00000185259 183 ntBASIC4.13□□□□□ -1.75
Vps53Q8CCB4 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Vps53Q8CCB4 Gm28506-201ENSMUST00000189937 150 ntBASIC4.13□□□□□ -1.75
Vps53Q8CCB4 Ighv1-40-201ENSMUST00000194231 345 ntBASIC4.13□□□□□ -1.75
Vps53Q8CCB4 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC4.13□□□□□ -1.75
Vps53Q8CCB4 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC4.13□□□□□ -1.75
Vps53Q8CCB4 Gm44513-201ENSMUST00000206811 439 ntBASIC4.13□□□□□ -1.75
Vps53Q8CCB4 Gm19126-201ENSMUST00000207896 509 ntBASIC4.13□□□□□ -1.75
Vps53Q8CCB4 Gm2436-201ENSMUST00000219562 774 ntBASIC4.13□□□□□ -1.75
Vps53Q8CCB4 AC167669.1-201ENSMUST00000224932 384 ntBASIC4.13□□□□□ -1.75
Vps53Q8CCB4 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Vps53Q8CCB4 Gm25475-201ENSMUST00000082825 180 ntBASIC4.13□□□□□ -1.75
Vps53Q8CCB4 Gm22740-201ENSMUST00000083439 109 ntBASIC4.13□□□□□ -1.75
Vps53Q8CCB4 Mir101b-201ENSMUST00000083622 97 ntBASIC4.13□□□□□ -1.75
Vps53Q8CCB4 Snord15a-201ENSMUST00000083888 148 ntBASIC4.13□□□□□ -1.75
Vps53Q8CCB4 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Vps53Q8CCB4 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
Vps53Q8CCB4 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Vps53Q8CCB4 Gm43259-201ENSMUST00000198446 3277 ntBASIC4.13□□□□□ -1.75
Vps53Q8CCB4 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Vps53Q8CCB4 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Vps53Q8CCB4 Gm15095-201ENSMUST00000118996 1430 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 173.2 ms