Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm14881-201ENSMUST00000120366 372 ntBASIC5.16□□□□□ -1.58
Trim47Q8C0E3 Gm14694-201ENSMUST00000121856 282 ntBASIC5.16□□□□□ -1.58
Trim47Q8C0E3 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC5.16□□□□□ -1.58
Trim47Q8C0E3 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC5.16□□□□□ -1.58
Trim47Q8C0E3 Gm24481-201ENSMUST00000157210 102 ntBASIC5.16□□□□□ -1.58
Trim47Q8C0E3 Gm22315-201ENSMUST00000158010 143 ntBASIC5.16□□□□□ -1.58
Trim47Q8C0E3 Gm23312-201ENSMUST00000158774 102 ntBASIC5.16□□□□□ -1.58
Trim47Q8C0E3 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC5.16□□□□□ -1.58
Trim47Q8C0E3 Gm27233-201ENSMUST00000184030 307 ntBASIC5.16□□□□□ -1.58
Trim47Q8C0E3 Mir6933-201ENSMUST00000184982 81 ntBASIC5.16□□□□□ -1.58
Trim47Q8C0E3 Gm37162-201ENSMUST00000191708 551 ntBASIC5.16□□□□□ -1.58
Trim47Q8C0E3 Gm44474-201ENSMUST00000196525 127 ntBASIC5.16□□□□□ -1.58
Trim47Q8C0E3 Igkv9-128-201ENSMUST00000196602 353 ntBASIC5.16□□□□□ -1.58
Trim47Q8C0E3 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC5.16□□□□□ -1.58
Trim47Q8C0E3 Gm44757-201ENSMUST00000206373 157 ntBASIC5.16□□□□□ -1.58
Trim47Q8C0E3 AC155805.1-201ENSMUST00000222419 3808 ntBASIC5.16□□□□□ -1.58
Trim47Q8C0E3 AC124581.4-201ENSMUST00000225874 463 ntBASIC5.16□□□□□ -1.58
Trim47Q8C0E3 n-R5s152-201ENSMUST00000093641 119 ntBASIC5.16□□□□□ -1.58
Trim47Q8C0E3 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Trim47Q8C0E3 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
Trim47Q8C0E3 Gm44433-201ENSMUST00000203540 4832 ntBASIC5.16□□□□□ -1.58
Trim47Q8C0E3 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Trim47Q8C0E3 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Trim47Q8C0E3 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Trim47Q8C0E3 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Trim47Q8C0E3 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Trim47Q8C0E3 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Trim47Q8C0E3 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC5.15□□□□□ -1.58
Trim47Q8C0E3 Mir465b-1-201ENSMUST00000103940 79 ntBASIC5.15□□□□□ -1.59
Trim47Q8C0E3 Gm23709-201ENSMUST00000104364 130 ntBASIC5.15□□□□□ -1.59
Trim47Q8C0E3 Gm22498-201ENSMUST00000104497 86 ntBASIC5.15□□□□□ -1.59
Trim47Q8C0E3 Mir465b-2-201ENSMUST00000104662 79 ntBASIC5.15□□□□□ -1.59
Trim47Q8C0E3 Gm11931-201ENSMUST00000121630 447 ntBASIC5.15□□□□□ -1.59
Trim47Q8C0E3 Gm22767-201ENSMUST00000158365 165 ntBASIC5.15□□□□□ -1.59
Trim47Q8C0E3 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Trim47Q8C0E3 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Trim47Q8C0E3 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Trim47Q8C0E3 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Trim47Q8C0E3 Gm37636-201ENSMUST00000193583 359 ntBASIC5.15□□□□□ -1.59
Trim47Q8C0E3 Igkv2-113-201ENSMUST00000196138 362 ntBASIC5.15□□□□□ -1.59
Trim47Q8C0E3 Gm8874-201ENSMUST00000196826 286 ntBASIC5.15□□□□□ -1.59
Trim47Q8C0E3 Gm9402-201ENSMUST00000196849 388 ntBASIC5.15□□□□□ -1.59
Trim47Q8C0E3 Gm7468-201ENSMUST00000203900 652 ntBASIC5.15□□□□□ -1.59
Trim47Q8C0E3 AC155715.1-201ENSMUST00000213575 463 ntBASIC5.15□□□□□ -1.59
Trim47Q8C0E3 Gm8942-201ENSMUST00000217892 400 ntBASIC5.15□□□□□ -1.59
Trim47Q8C0E3 Gm7065-201ENSMUST00000222150 474 ntBASIC5.15□□□□□ -1.59
Trim47Q8C0E3 AC115735.2-201ENSMUST00000227135 351 ntBASIC5.15□□□□□ -1.59
Trim47Q8C0E3 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Trim47Q8C0E3 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Trim47Q8C0E3 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC5.15□□□□□ -1.59
Trim47Q8C0E3 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Trim47Q8C0E3 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Trim47Q8C0E3 AC115970.1-201ENSMUST00000218910 1758 ntBASIC5.14□□□□□ -1.59
Trim47Q8C0E3 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Trim47Q8C0E3 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Trim47Q8C0E3 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Trim47Q8C0E3 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Trim47Q8C0E3 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC5.14□□□□□ -1.59
Trim47Q8C0E3 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Trim47Q8C0E3 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Trim47Q8C0E3 Gm15752-201ENSMUST00000117427 394 ntBASIC5.14□□□□□ -1.59
Trim47Q8C0E3 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC5.14□□□□□ -1.59
Trim47Q8C0E3 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC5.14□□□□□ -1.59
Trim47Q8C0E3 Gm17187-201ENSMUST00000164622 410 ntBASIC5.14□□□□□ -1.59
Trim47Q8C0E3 Gm25121-201ENSMUST00000179846 79 ntBASIC5.14□□□□□ -1.59
Trim47Q8C0E3 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC5.14□□□□□ -1.59
Trim47Q8C0E3 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC5.14□□□□□ -1.59
Trim47Q8C0E3 Gm28552-201ENSMUST00000190725 388 ntBASIC5.14□□□□□ -1.59
Trim47Q8C0E3 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC5.14□□□□□ -1.59
Trim47Q8C0E3 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Trim47Q8C0E3 Gm25818-201ENSMUST00000083282 164 ntBASIC5.14□□□□□ -1.59
Trim47Q8C0E3 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
Trim47Q8C0E3 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Trim47Q8C0E3 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Trim47Q8C0E3 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Trim47Q8C0E3 Gm8989-201ENSMUST00000184782 7275 ntBASIC5.14□□□□□ -1.59
Trim47Q8C0E3 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Trim47Q8C0E3 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC5.13□□□□□ -1.59
Trim47Q8C0E3 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Trim47Q8C0E3 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Trim47Q8C0E3 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Trim47Q8C0E3 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Trim47Q8C0E3 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Trim47Q8C0E3 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Trim47Q8C0E3 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
Trim47Q8C0E3 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC5.13□□□□□ -1.59
Trim47Q8C0E3 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Trim47Q8C0E3 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Trim47Q8C0E3 Gm22003-201ENSMUST00000101885 107 ntBASIC5.13□□□□□ -1.59
Trim47Q8C0E3 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC5.13□□□□□ -1.59
Trim47Q8C0E3 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC5.13□□□□□ -1.59
Trim47Q8C0E3 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC5.13□□□□□ -1.59
Trim47Q8C0E3 Gm13787-201ENSMUST00000120422 168 ntBASIC5.13□□□□□ -1.59
Trim47Q8C0E3 Gm14303-201ENSMUST00000121320 171 ntBASIC5.13□□□□□ -1.59
Trim47Q8C0E3 Gm22027-201ENSMUST00000122737 127 ntBASIC5.13□□□□□ -1.59
Trim47Q8C0E3 Gm22756-201ENSMUST00000180118 107 ntBASIC5.13□□□□□ -1.59
Trim47Q8C0E3 Mir7074-201ENSMUST00000183884 63 ntBASIC5.13□□□□□ -1.59
Trim47Q8C0E3 Gm27568-201ENSMUST00000184220 99 ntBASIC5.13□□□□□ -1.59
Trim47Q8C0E3 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC5.13□□□□□ -1.59
Trim47Q8C0E3 Gm19901-201ENSMUST00000192191 495 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms