Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 AC154276.2-201ENSMUST00000227707 309 ntBASIC2.52□□□□□ -2.01
Usp47Q8BY87 AC154730.1-201ENSMUST00000227874 816 ntBASIC2.52□□□□□ -2.01
Usp47Q8BY87 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Usp47Q8BY87 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Usp47Q8BY87 AC124746.1-201ENSMUST00000227535 1300 ntBASIC2.52□□□□□ -2.01
Usp47Q8BY87 Gm15161-201ENSMUST00000117340 387 ntBASIC2.51□□□□□ -2.01
Usp47Q8BY87 Gm2066-201ENSMUST00000118046 389 ntBASIC2.51□□□□□ -2.01
Usp47Q8BY87 Gm2318-201ENSMUST00000119623 639 ntBASIC2.51□□□□□ -2.01
Usp47Q8BY87 Gm2005-201ENSMUST00000120759 542 ntBASIC2.51□□□□□ -2.01
Usp47Q8BY87 Gm13676-201ENSMUST00000122185 591 ntBASIC2.51□□□□□ -2.01
Usp47Q8BY87 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC2.51□□□□□ -2.01
Usp47Q8BY87 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Usp47Q8BY87 Gm7438-201ENSMUST00000177664 639 ntBASIC2.51□□□□□ -2.01
Usp47Q8BY87 Gm7408-201ENSMUST00000178014 639 ntBASIC2.51□□□□□ -2.01
Usp47Q8BY87 Gm7386-201ENSMUST00000178020 639 ntBASIC2.51□□□□□ -2.01
Usp47Q8BY87 Gm3657-201ENSMUST00000178170 639 ntBASIC2.51□□□□□ -2.01
Usp47Q8BY87 Gm7415-201ENSMUST00000178205 639 ntBASIC2.51□□□□□ -2.01
Usp47Q8BY87 Gm7398-201ENSMUST00000178589 639 ntBASIC2.51□□□□□ -2.01
Usp47Q8BY87 Gm7391-201ENSMUST00000178680 639 ntBASIC2.51□□□□□ -2.01
Usp47Q8BY87 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Usp47Q8BY87 Gm7375-201ENSMUST00000179232 639 ntBASIC2.51□□□□□ -2.01
Usp47Q8BY87 Gm3681-201ENSMUST00000179940 639 ntBASIC2.51□□□□□ -2.01
Usp47Q8BY87 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.51□□□□□ -2.01
Usp47Q8BY87 Gm44232-201ENSMUST00000204537 225 ntBASIC2.51□□□□□ -2.01
Usp47Q8BY87 Gm44665-201ENSMUST00000205381 251 ntBASIC2.51□□□□□ -2.01
Usp47Q8BY87 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC2.51□□□□□ -2.01
Usp47Q8BY87 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC2.51□□□□□ -2.01
Usp47Q8BY87 AC192088.2-201ENSMUST00000227590 411 ntBASIC2.51□□□□□ -2.01
Usp47Q8BY87 Mir325-201ENSMUST00000083491 98 ntBASIC2.51□□□□□ -2.01
Usp47Q8BY87 Gm8675-201ENSMUST00000201408 1856 ntBASIC2.51□□□□□ -2.01
Usp47Q8BY87 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC2.5□□□□□ -2.01
Usp47Q8BY87 Gm14020-201ENSMUST00000118165 662 ntBASIC2.5□□□□□ -2.01
Usp47Q8BY87 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Usp47Q8BY87 Gm12926-201ENSMUST00000121158 409 ntBASIC2.5□□□□□ -2.01
Usp47Q8BY87 Gm25279-201ENSMUST00000122608 133 ntBASIC2.5□□□□□ -2.01
Usp47Q8BY87 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Usp47Q8BY87 Gm5958-201ENSMUST00000147698 297 ntBASIC2.5□□□□□ -2.01
Usp47Q8BY87 Gm6788-201ENSMUST00000166459 270 ntBASIC2.5□□□□□ -2.01
Usp47Q8BY87 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC2.5□□□□□ -2.01
Usp47Q8BY87 Gm23053-201ENSMUST00000175136 96 ntBASIC2.5□□□□□ -2.01
Usp47Q8BY87 Gm26864-201ENSMUST00000181346 156 ntBASIC2.5□□□□□ -2.01
Usp47Q8BY87 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC2.5□□□□□ -2.01
Usp47Q8BY87 Gm37778-201ENSMUST00000191732 190 ntBASIC2.5□□□□□ -2.01
Usp47Q8BY87 Igkv13-76-201ENSMUST00000197621 347 ntBASIC2.5□□□□□ -2.01
Usp47Q8BY87 Gm44857-201ENSMUST00000208331 196 ntBASIC2.5□□□□□ -2.01
Usp47Q8BY87 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Usp47Q8BY87 Snord14d-201ENSMUST00000083424 86 ntBASIC2.5□□□□□ -2.01
Usp47Q8BY87 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
Usp47Q8BY87 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.5□□□□□ -2.01
Usp47Q8BY87 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC2.5□□□□□ -2.01
Usp47Q8BY87 Gm25068-201ENSMUST00000103895 110 ntBASIC2.49□□□□□ -2.01
Usp47Q8BY87 Gm14880-201ENSMUST00000117581 292 ntBASIC2.49□□□□□ -2.01
Usp47Q8BY87 Gm22794-201ENSMUST00000157228 306 ntBASIC2.49□□□□□ -2.01
Usp47Q8BY87 Gm24854-201ENSMUST00000158025 98 ntBASIC2.49□□□□□ -2.01
Usp47Q8BY87 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Usp47Q8BY87 Atp2b4-208ENSMUST00000167348 243 ntBASIC2.49□□□□□ -2.01
Usp47Q8BY87 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC2.49□□□□□ -2.01
Usp47Q8BY87 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Usp47Q8BY87 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC2.49□□□□□ -2.01
Usp47Q8BY87 Gm43991-201ENSMUST00000203751 274 ntBASIC2.49□□□□□ -2.01
Usp47Q8BY87 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC2.49□□□□□ -2.01
Usp47Q8BY87 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC2.49□□□□□ -2.01
Usp47Q8BY87 Gm45742-201ENSMUST00000212400 433 ntBASIC2.49□□□□□ -2.01
Usp47Q8BY87 Gm19885-201ENSMUST00000212853 343 ntBASIC2.49□□□□□ -2.01
Usp47Q8BY87 AC165146.1-201ENSMUST00000223777 900 ntBASIC2.49□□□□□ -2.01
Usp47Q8BY87 AC151902.1-201ENSMUST00000227800 375 ntBASIC2.49□□□□□ -2.01
Usp47Q8BY87 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Usp47Q8BY87 Gm11819-201ENSMUST00000122192 372 ntBASIC2.49□□□□□ -2.01
Usp47Q8BY87 Gm26099-201ENSMUST00000157248 109 ntBASIC2.49□□□□□ -2.01
Usp47Q8BY87 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC2.49□□□□□ -2.01
Usp47Q8BY87 Gm25944-201ENSMUST00000178758 94 ntBASIC2.49□□□□□ -2.01
Usp47Q8BY87 Gm27698-201ENSMUST00000184060 249 ntBASIC2.49□□□□□ -2.01
Usp47Q8BY87 Mir6950-201ENSMUST00000184438 73 ntBASIC2.49□□□□□ -2.01
Usp47Q8BY87 Gm28163-201ENSMUST00000187099 325 ntBASIC2.49□□□□□ -2.01
Usp47Q8BY87 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Usp47Q8BY87 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC2.49□□□□□ -2.01
Usp47Q8BY87 Gm45247-201ENSMUST00000210757 309 ntBASIC2.49□□□□□ -2.01
Usp47Q8BY87 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Usp47Q8BY87 AC156952.1-201ENSMUST00000220361 793 ntBASIC2.49□□□□□ -2.01
Usp47Q8BY87 AC163664.1-201ENSMUST00000226251 1248 ntBASIC2.49□□□□□ -2.01
Usp47Q8BY87 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC2.49□□□□□ -2.01
Usp47Q8BY87 Gm42968-201ENSMUST00000198578 1372 ntBASIC2.48□□□□□ -2.01
Usp47Q8BY87 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Usp47Q8BY87 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Usp47Q8BY87 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC2.48□□□□□ -2.01
Usp47Q8BY87 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Usp47Q8BY87 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Usp47Q8BY87 Gm42701-201ENSMUST00000196117 1657 ntBASIC2.48□□□□□ -2.01
Usp47Q8BY87 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
Usp47Q8BY87 Gm22761-201ENSMUST00000102278 96 ntBASIC2.48□□□□□ -2.01
Usp47Q8BY87 Gm23060-201ENSMUST00000102345 109 ntBASIC2.48□□□□□ -2.01
Usp47Q8BY87 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC2.48□□□□□ -2.01
Usp47Q8BY87 Gm15282-201ENSMUST00000117707 300 ntBASIC2.48□□□□□ -2.01
Usp47Q8BY87 Gm14800-201ENSMUST00000122084 1272 ntBASIC2.48□□□□□ -2.01
Usp47Q8BY87 Gm24379-201ENSMUST00000122695 86 ntBASIC2.48□□□□□ -2.01
Usp47Q8BY87 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC2.48□□□□□ -2.01
Usp47Q8BY87 Gm13901-201ENSMUST00000137252 468 ntBASIC2.48□□□□□ -2.01
Usp47Q8BY87 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC2.48□□□□□ -2.01
Usp47Q8BY87 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Usp47Q8BY87 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 96.4 ms