Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Gm7468-201ENSMUST00000203900 652 ntBASIC4.85□□□□□ -1.63
Prpf40bQ80W14 Gm44446-201ENSMUST00000204864 255 ntBASIC4.85□□□□□ -1.63
Prpf40bQ80W14 Gm34779-201ENSMUST00000210036 263 ntBASIC4.85□□□□□ -1.63
Prpf40bQ80W14 AC154374.1-201ENSMUST00000215351 351 ntBASIC4.85□□□□□ -1.63
Prpf40bQ80W14 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC4.85□□□□□ -1.63
Prpf40bQ80W14 AC130821.1-201ENSMUST00000221997 293 ntBASIC4.85□□□□□ -1.63
Prpf40bQ80W14 AC133598.4-202ENSMUST00000225267 469 ntBASIC4.85□□□□□ -1.63
Prpf40bQ80W14 AC126440.1-201ENSMUST00000227098 349 ntBASIC4.85□□□□□ -1.63
Prpf40bQ80W14 Gm4987-201ENSMUST00000078326 408 ntBASIC4.85□□□□□ -1.63
Prpf40bQ80W14 Snora7a-201ENSMUST00000082629 140 ntBASIC4.85□□□□□ -1.63
Prpf40bQ80W14 Gm23055-201ENSMUST00000082805 94 ntBASIC4.85□□□□□ -1.63
Prpf40bQ80W14 Gm23510-201ENSMUST00000083083 163 ntBASIC4.85□□□□□ -1.63
Prpf40bQ80W14 Mir99a-201ENSMUST00000083596 65 ntBASIC4.85□□□□□ -1.63
Prpf40bQ80W14 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
Prpf40bQ80W14 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Prpf40bQ80W14 Gm37868-201ENSMUST00000195578 2735 ntBASIC4.85□□□□□ -1.63
Prpf40bQ80W14 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Prpf40bQ80W14 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC4.85□□□□□ -1.63
Prpf40bQ80W14 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Prpf40bQ80W14 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Prpf40bQ80W14 Gm45884-201ENSMUST00000209540 3416 ntBASIC4.84□□□□□ -1.63
Prpf40bQ80W14 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Prpf40bQ80W14 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
Prpf40bQ80W14 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
Prpf40bQ80W14 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC4.84□□□□□ -1.63
Prpf40bQ80W14 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Prpf40bQ80W14 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Prpf40bQ80W14 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC4.84□□□□□ -1.63
Prpf40bQ80W14 Mir297a-2-201ENSMUST00000103795 90 ntBASIC4.84□□□□□ -1.63
Prpf40bQ80W14 Gm12719-201ENSMUST00000118859 241 ntBASIC4.84□□□□□ -1.63
Prpf40bQ80W14 Gm15211-201ENSMUST00000118932 528 ntBASIC4.84□□□□□ -1.63
Prpf40bQ80W14 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Prpf40bQ80W14 Gm15212-201ENSMUST00000122403 466 ntBASIC4.84□□□□□ -1.63
Prpf40bQ80W14 Gm2389-201ENSMUST00000160487 189 ntBASIC4.84□□□□□ -1.63
Prpf40bQ80W14 Gm27254-201ENSMUST00000183926 517 ntBASIC4.84□□□□□ -1.63
Prpf40bQ80W14 Gm18956-201ENSMUST00000192857 480 ntBASIC4.84□□□□□ -1.63
Prpf40bQ80W14 Gm37746-201ENSMUST00000193249 198 ntBASIC4.84□□□□□ -1.63
Prpf40bQ80W14 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC4.84□□□□□ -1.63
Prpf40bQ80W14 Gm8820-201ENSMUST00000204077 571 ntBASIC4.84□□□□□ -1.63
Prpf40bQ80W14 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC4.84□□□□□ -1.63
Prpf40bQ80W14 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC4.84□□□□□ -1.63
Prpf40bQ80W14 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC4.84□□□□□ -1.63
Prpf40bQ80W14 AC152062.1-201ENSMUST00000218129 386 ntBASIC4.84□□□□□ -1.63
Prpf40bQ80W14 AC160865.1-201ENSMUST00000219873 151 ntBASIC4.84□□□□□ -1.63
Prpf40bQ80W14 AC130829.3-201ENSMUST00000222735 154 ntBASIC4.84□□□□□ -1.63
Prpf40bQ80W14 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Prpf40bQ80W14 Gm24611-201ENSMUST00000083272 107 ntBASIC4.84□□□□□ -1.63
Prpf40bQ80W14 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Prpf40bQ80W14 Neat1-201ENSMUST00000173672 20771 ntBASIC4.84□□□□□ -1.63
Prpf40bQ80W14 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Prpf40bQ80W14 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
Prpf40bQ80W14 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Prpf40bQ80W14 Gm37045-201ENSMUST00000192016 2463 ntBASIC4.84□□□□□ -1.64
Prpf40bQ80W14 Gm45517-201ENSMUST00000209973 2468 ntBASIC4.84□□□□□ -1.64
Prpf40bQ80W14 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Prpf40bQ80W14 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Prpf40bQ80W14 Gm37747-201ENSMUST00000193717 4003 ntBASIC4.83□□□□□ -1.64
Prpf40bQ80W14 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
Prpf40bQ80W14 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Prpf40bQ80W14 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC4.83□□□□□ -1.64
Prpf40bQ80W14 AC154462.1-201ENSMUST00000228897 2260 ntBASIC4.83□□□□□ -1.64
Prpf40bQ80W14 Gm14298-201ENSMUST00000139032 237 ntBASIC4.83□□□□□ -1.64
Prpf40bQ80W14 Gm16356-201ENSMUST00000143300 169 ntBASIC4.83□□□□□ -1.64
Prpf40bQ80W14 Gm25637-201ENSMUST00000157529 107 ntBASIC4.83□□□□□ -1.64
Prpf40bQ80W14 Gm26036-201ENSMUST00000158149 144 ntBASIC4.83□□□□□ -1.64
Prpf40bQ80W14 Gm10357-201ENSMUST00000159886 264 ntBASIC4.83□□□□□ -1.64
Prpf40bQ80W14 Gm20534-201ENSMUST00000172957 172 ntBASIC4.83□□□□□ -1.64
Prpf40bQ80W14 Mir5129-201ENSMUST00000174938 78 ntBASIC4.83□□□□□ -1.64
Prpf40bQ80W14 Mir6355-201ENSMUST00000183687 106 ntBASIC4.83□□□□□ -1.64
Prpf40bQ80W14 Gm28314-201ENSMUST00000191276 345 ntBASIC4.83□□□□□ -1.64
Prpf40bQ80W14 Igkv4-65-201ENSMUST00000196986 358 ntBASIC4.83□□□□□ -1.64
Prpf40bQ80W14 Gm44324-201ENSMUST00000198517 135 ntBASIC4.83□□□□□ -1.64
Prpf40bQ80W14 Gm43028-201ENSMUST00000202561 481 ntBASIC4.83□□□□□ -1.64
Prpf40bQ80W14 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Prpf40bQ80W14 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC4.83□□□□□ -1.64
Prpf40bQ80W14 Gm45815-201ENSMUST00000220241 146 ntBASIC4.83□□□□□ -1.64
Prpf40bQ80W14 AC138401.1-201ENSMUST00000221533 116 ntBASIC4.83□□□□□ -1.64
Prpf40bQ80W14 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Prpf40bQ80W14 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.83□□□□□ -1.64
Prpf40bQ80W14 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Prpf40bQ80W14 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Prpf40bQ80W14 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Prpf40bQ80W14 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Prpf40bQ80W14 Gm45137-201ENSMUST00000208652 4415 ntBASIC4.83□□□□□ -1.64
Prpf40bQ80W14 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Prpf40bQ80W14 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Prpf40bQ80W14 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Prpf40bQ80W14 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Prpf40bQ80W14 Gm14296-202ENSMUST00000108931 750 ntBASIC4.82□□□□□ -1.64
Prpf40bQ80W14 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC4.82□□□□□ -1.64
Prpf40bQ80W14 Gm12805-201ENSMUST00000117305 1048 ntBASIC4.82□□□□□ -1.64
Prpf40bQ80W14 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC4.82□□□□□ -1.64
Prpf40bQ80W14 Gm12191-201ENSMUST00000118307 348 ntBASIC4.82□□□□□ -1.64
Prpf40bQ80W14 Gm9703-201ENSMUST00000119573 343 ntBASIC4.82□□□□□ -1.64
Prpf40bQ80W14 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC4.82□□□□□ -1.64
Prpf40bQ80W14 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC4.82□□□□□ -1.64
Prpf40bQ80W14 Gm13396-201ENSMUST00000120617 271 ntBASIC4.82□□□□□ -1.64
Prpf40bQ80W14 Gm13725-201ENSMUST00000122139 207 ntBASIC4.82□□□□□ -1.64
Prpf40bQ80W14 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Prpf40bQ80W14 Gm25066-201ENSMUST00000158145 123 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms