Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm42453-201ENSMUST00000200477 409 ntBASIC4.81□□□□□ -1.64
Trim56Q80VI1 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC4.81□□□□□ -1.64
Trim56Q80VI1 AC165157.3-201ENSMUST00000220815 103 ntBASIC4.81□□□□□ -1.64
Trim56Q80VI1 CT030242.2-201ENSMUST00000221588 148 ntBASIC4.81□□□□□ -1.64
Trim56Q80VI1 Gm5548-201ENSMUST00000055878 397 ntBASIC4.81□□□□□ -1.64
Trim56Q80VI1 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC4.81□□□□□ -1.64
Trim56Q80VI1 Gm26165-201ENSMUST00000083791 138 ntBASIC4.81□□□□□ -1.64
Trim56Q80VI1 Gm23845-201ENSMUST00000083834 152 ntBASIC4.81□□□□□ -1.64
Trim56Q80VI1 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Trim56Q80VI1 AC167360.1-201ENSMUST00000222596 2494 ntBASIC4.81□□□□□ -1.64
Trim56Q80VI1 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Trim56Q80VI1 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
Trim56Q80VI1 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Trim56Q80VI1 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
Trim56Q80VI1 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Trim56Q80VI1 Gm38032-201ENSMUST00000195052 1589 ntBASIC4.8□□□□□ -1.64
Trim56Q80VI1 Gm24067-201ENSMUST00000104514 85 ntBASIC4.8□□□□□ -1.64
Trim56Q80VI1 Gm15148-201ENSMUST00000117602 156 ntBASIC4.8□□□□□ -1.64
Trim56Q80VI1 Gm11718-201ENSMUST00000119942 537 ntBASIC4.8□□□□□ -1.64
Trim56Q80VI1 Gm15213-201ENSMUST00000122098 216 ntBASIC4.8□□□□□ -1.64
Trim56Q80VI1 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC4.8□□□□□ -1.64
Trim56Q80VI1 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC4.8□□□□□ -1.64
Trim56Q80VI1 Gm6969-201ENSMUST00000140065 342 ntBASIC4.8□□□□□ -1.64
Trim56Q80VI1 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC4.8□□□□□ -1.64
Trim56Q80VI1 Gm27834-201ENSMUST00000183427 125 ntBASIC4.8□□□□□ -1.64
Trim56Q80VI1 Gm29147-201ENSMUST00000186846 315 ntBASIC4.8□□□□□ -1.64
Trim56Q80VI1 Gm29227-201ENSMUST00000187139 315 ntBASIC4.8□□□□□ -1.64
Trim56Q80VI1 Gm29610-201ENSMUST00000187749 453 ntBASIC4.8□□□□□ -1.64
Trim56Q80VI1 Gm29034-201ENSMUST00000188099 315 ntBASIC4.8□□□□□ -1.64
Trim56Q80VI1 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC4.8□□□□□ -1.64
Trim56Q80VI1 Gm28160-201ENSMUST00000191229 315 ntBASIC4.8□□□□□ -1.64
Trim56Q80VI1 Gm37129-201ENSMUST00000195791 315 ntBASIC4.8□□□□□ -1.64
Trim56Q80VI1 Gm35931-201ENSMUST00000203931 448 ntBASIC4.8□□□□□ -1.64
Trim56Q80VI1 Gm8820-201ENSMUST00000204077 571 ntBASIC4.8□□□□□ -1.64
Trim56Q80VI1 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC4.8□□□□□ -1.64
Trim56Q80VI1 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Trim56Q80VI1 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Trim56Q80VI1 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Trim56Q80VI1 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC4.8□□□□□ -1.64
Trim56Q80VI1 Gm45235-201ENSMUST00000208016 4465 ntBASIC4.8□□□□□ -1.64
Trim56Q80VI1 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC4.79□□□□□ -1.64
Trim56Q80VI1 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Trim56Q80VI1 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC4.79□□□□□ -1.64
Trim56Q80VI1 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
Trim56Q80VI1 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Trim56Q80VI1 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Trim56Q80VI1 Gm44438-201ENSMUST00000204388 3236 ntBASIC4.79□□□□□ -1.64
Trim56Q80VI1 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC4.79□□□□□ -1.64
Trim56Q80VI1 Gm24318-201ENSMUST00000104490 131 ntBASIC4.79□□□□□ -1.64
Trim56Q80VI1 Gm24640-201ENSMUST00000116949 126 ntBASIC4.79□□□□□ -1.64
Trim56Q80VI1 Gm22626-201ENSMUST00000116990 126 ntBASIC4.79□□□□□ -1.64
Trim56Q80VI1 Gm15313-201ENSMUST00000119179 282 ntBASIC4.79□□□□□ -1.64
Trim56Q80VI1 Gm25341-201ENSMUST00000157461 268 ntBASIC4.79□□□□□ -1.64
Trim56Q80VI1 Gm26041-201ENSMUST00000158148 108 ntBASIC4.79□□□□□ -1.64
Trim56Q80VI1 Gm24503-201ENSMUST00000158454 135 ntBASIC4.79□□□□□ -1.64
Trim56Q80VI1 Gm16318-201ENSMUST00000162402 601 ntBASIC4.79□□□□□ -1.64
Trim56Q80VI1 Gm24761-201ENSMUST00000179589 127 ntBASIC4.79□□□□□ -1.64
Trim56Q80VI1 Gm24488-201ENSMUST00000179934 127 ntBASIC4.79□□□□□ -1.64
Trim56Q80VI1 Gm25701-201ENSMUST00000179988 127 ntBASIC4.79□□□□□ -1.64
Trim56Q80VI1 Gm26431-201ENSMUST00000180199 127 ntBASIC4.79□□□□□ -1.64
Trim56Q80VI1 Gm29262-201ENSMUST00000190084 196 ntBASIC4.79□□□□□ -1.64
Trim56Q80VI1 Gm18956-201ENSMUST00000192857 480 ntBASIC4.79□□□□□ -1.64
Trim56Q80VI1 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC4.79□□□□□ -1.64
Trim56Q80VI1 AC154328.1-201ENSMUST00000225875 307 ntBASIC4.79□□□□□ -1.64
Trim56Q80VI1 Gm25481-201ENSMUST00000083221 158 ntBASIC4.79□□□□□ -1.64
Trim56Q80VI1 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Trim56Q80VI1 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Trim56Q80VI1 AC121997.2-203ENSMUST00000228613 4192 ntBASIC4.79□□□□□ -1.64
Trim56Q80VI1 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Trim56Q80VI1 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Trim56Q80VI1 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Trim56Q80VI1 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
Trim56Q80VI1 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Trim56Q80VI1 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
Trim56Q80VI1 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Trim56Q80VI1 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC4.78□□□□□ -1.64
Trim56Q80VI1 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Trim56Q80VI1 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Trim56Q80VI1 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Trim56Q80VI1 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC4.78□□□□□ -1.64
Trim56Q80VI1 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC4.78□□□□□ -1.64
Trim56Q80VI1 Gm12191-201ENSMUST00000118307 348 ntBASIC4.78□□□□□ -1.64
Trim56Q80VI1 Gm11935-201ENSMUST00000118608 399 ntBASIC4.78□□□□□ -1.64
Trim56Q80VI1 Gm14861-201ENSMUST00000119451 455 ntBASIC4.78□□□□□ -1.64
Trim56Q80VI1 Gm9703-201ENSMUST00000119573 343 ntBASIC4.78□□□□□ -1.64
Trim56Q80VI1 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC4.78□□□□□ -1.64
Trim56Q80VI1 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC4.78□□□□□ -1.64
Trim56Q80VI1 Gm11785-201ENSMUST00000120165 601 ntBASIC4.78□□□□□ -1.64
Trim56Q80VI1 Gm11931-201ENSMUST00000121630 447 ntBASIC4.78□□□□□ -1.64
Trim56Q80VI1 Gm9003-201ENSMUST00000121810 482 ntBASIC4.78□□□□□ -1.64
Trim56Q80VI1 Gm27926-201ENSMUST00000157180 66 ntBASIC4.78□□□□□ -1.64
Trim56Q80VI1 Gm17065-201ENSMUST00000165245 239 ntBASIC4.78□□□□□ -1.64
Trim56Q80VI1 Gm24085-201ENSMUST00000175172 116 ntBASIC4.78□□□□□ -1.64
Trim56Q80VI1 Mir1251-201ENSMUST00000175486 84 ntBASIC4.78□□□□□ -1.64
Trim56Q80VI1 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC4.78□□□□□ -1.64
Trim56Q80VI1 Mir195b-201ENSMUST00000184814 97 ntBASIC4.78□□□□□ -1.64
Trim56Q80VI1 Mir6975-201ENSMUST00000184879 61 ntBASIC4.78□□□□□ -1.64
Trim56Q80VI1 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC4.78□□□□□ -1.64
Trim56Q80VI1 Gm44324-201ENSMUST00000198517 135 ntBASIC4.78□□□□□ -1.64
Trim56Q80VI1 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms