Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Sh3rf1Q69ZI1 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Sh3rf1Q69ZI1 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Sh3rf1Q69ZI1 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Sh3rf1Q69ZI1 Gm42927-201ENSMUST00000200624 3841 ntBASIC4.51□□□□□ -1.69
Sh3rf1Q69ZI1 Gm14910-201ENSMUST00000121037 1805 ntBASIC4.51□□□□□ -1.69
Sh3rf1Q69ZI1 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC4.51□□□□□ -1.69
Sh3rf1Q69ZI1 Gm45517-201ENSMUST00000209973 2468 ntBASIC4.51□□□□□ -1.69
Sh3rf1Q69ZI1 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Sh3rf1Q69ZI1 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC4.51□□□□□ -1.69
Sh3rf1Q69ZI1 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Sh3rf1Q69ZI1 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Sh3rf1Q69ZI1 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Sh3rf1Q69ZI1 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC4.51□□□□□ -1.69
Sh3rf1Q69ZI1 Defa-ps15-201ENSMUST00000118178 477 ntBASIC4.51□□□□□ -1.69
Sh3rf1Q69ZI1 Gm14846-201ENSMUST00000121868 216 ntBASIC4.51□□□□□ -1.69
Sh3rf1Q69ZI1 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC4.51□□□□□ -1.69
Sh3rf1Q69ZI1 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Sh3rf1Q69ZI1 Gm24251-201ENSMUST00000157324 114 ntBASIC4.51□□□□□ -1.69
Sh3rf1Q69ZI1 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Sh3rf1Q69ZI1 Gm17119-201ENSMUST00000163943 280 ntBASIC4.51□□□□□ -1.69
Sh3rf1Q69ZI1 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Sh3rf1Q69ZI1 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Sh3rf1Q69ZI1 Mir6960-201ENSMUST00000183449 61 ntBASIC4.51□□□□□ -1.69
Sh3rf1Q69ZI1 Mir7074-201ENSMUST00000183884 63 ntBASIC4.51□□□□□ -1.69
Sh3rf1Q69ZI1 Gm29657-201ENSMUST00000189807 342 ntBASIC4.51□□□□□ -1.69
Sh3rf1Q69ZI1 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC4.51□□□□□ -1.69
Sh3rf1Q69ZI1 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC4.51□□□□□ -1.69
Sh3rf1Q69ZI1 Gm17779-201ENSMUST00000213395 394 ntBASIC4.51□□□□□ -1.69
Sh3rf1Q69ZI1 Gm46190-201ENSMUST00000219650 427 ntBASIC4.51□□□□□ -1.69
Sh3rf1Q69ZI1 CT009713.4-201ENSMUST00000224246 272 ntBASIC4.51□□□□□ -1.69
Sh3rf1Q69ZI1 AC126440.1-201ENSMUST00000227098 349 ntBASIC4.51□□□□□ -1.69
Sh3rf1Q69ZI1 Snord14e-201ENSMUST00000082857 90 ntBASIC4.51□□□□□ -1.69
Sh3rf1Q69ZI1 n-R5s85-201ENSMUST00000083453 113 ntBASIC4.51□□□□□ -1.69
Sh3rf1Q69ZI1 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
Sh3rf1Q69ZI1 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
Sh3rf1Q69ZI1 Gm37747-201ENSMUST00000193717 4003 ntBASIC4.51□□□□□ -1.69
Sh3rf1Q69ZI1 Gm14421-201ENSMUST00000121755 1958 ntBASIC4.51□□□□□ -1.69
Sh3rf1Q69ZI1 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC4.51□□□□□ -1.69
Sh3rf1Q69ZI1 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Sh3rf1Q69ZI1 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Sh3rf1Q69ZI1 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Sh3rf1Q69ZI1 Gm44283-201ENSMUST00000204461 3950 ntBASIC4.5□□□□□ -1.69
Sh3rf1Q69ZI1 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
Sh3rf1Q69ZI1 Gm37764-201ENSMUST00000194664 2150 ntBASIC4.5□□□□□ -1.69
Sh3rf1Q69ZI1 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Sh3rf1Q69ZI1 Gm22473-201ENSMUST00000104114 132 ntBASIC4.5□□□□□ -1.69
Sh3rf1Q69ZI1 Gm23594-201ENSMUST00000104307 134 ntBASIC4.5□□□□□ -1.69
Sh3rf1Q69ZI1 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Sh3rf1Q69ZI1 Gm24482-201ENSMUST00000117005 93 ntBASIC4.5□□□□□ -1.69
Sh3rf1Q69ZI1 Gm11693-201ENSMUST00000119625 565 ntBASIC4.5□□□□□ -1.69
Sh3rf1Q69ZI1 Gm14656-201ENSMUST00000120342 502 ntBASIC4.5□□□□□ -1.69
Sh3rf1Q69ZI1 Gm25783-201ENSMUST00000122525 190 ntBASIC4.5□□□□□ -1.69
Sh3rf1Q69ZI1 Gm25321-201ENSMUST00000122558 102 ntBASIC4.5□□□□□ -1.69
Sh3rf1Q69ZI1 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Sh3rf1Q69ZI1 Gm22059-201ENSMUST00000157544 104 ntBASIC4.5□□□□□ -1.69
Sh3rf1Q69ZI1 Gm23557-201ENSMUST00000157820 138 ntBASIC4.5□□□□□ -1.69
Sh3rf1Q69ZI1 Gm27233-201ENSMUST00000184030 307 ntBASIC4.5□□□□□ -1.69
Sh3rf1Q69ZI1 Gm9696-202ENSMUST00000191541 830 ntBASIC4.5□□□□□ -1.69
Sh3rf1Q69ZI1 Mir3535-201ENSMUST00000197651 147 ntBASIC4.5□□□□□ -1.69
Sh3rf1Q69ZI1 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC4.5□□□□□ -1.69
Sh3rf1Q69ZI1 Gm46194-201ENSMUST00000218136 320 ntBASIC4.5□□□□□ -1.69
Sh3rf1Q69ZI1 AC153864.2-201ENSMUST00000220424 292 ntBASIC4.5□□□□□ -1.69
Sh3rf1Q69ZI1 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC4.5□□□□□ -1.69
Sh3rf1Q69ZI1 AC172751.1-201ENSMUST00000226887 440 ntBASIC4.5□□□□□ -1.69
Sh3rf1Q69ZI1 n-R5s50-201ENSMUST00000083168 111 ntBASIC4.5□□□□□ -1.69
Sh3rf1Q69ZI1 Mir202-201ENSMUST00000083568 72 ntBASIC4.5□□□□□ -1.69
Sh3rf1Q69ZI1 Mir215-201ENSMUST00000083628 112 ntBASIC4.5□□□□□ -1.69
Sh3rf1Q69ZI1 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
Sh3rf1Q69ZI1 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Sh3rf1Q69ZI1 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Sh3rf1Q69ZI1 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Sh3rf1Q69ZI1 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC4.49□□□□□ -1.69
Sh3rf1Q69ZI1 Gm37862-201ENSMUST00000193079 2533 ntBASIC4.49□□□□□ -1.69
Sh3rf1Q69ZI1 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Sh3rf1Q69ZI1 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Sh3rf1Q69ZI1 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Sh3rf1Q69ZI1 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Sh3rf1Q69ZI1 Gm25538-201ENSMUST00000101943 107 ntBASIC4.49□□□□□ -1.69
Sh3rf1Q69ZI1 Mir701-201ENSMUST00000102208 109 ntBASIC4.49□□□□□ -1.69
Sh3rf1Q69ZI1 Mir105-201ENSMUST00000104655 80 ntBASIC4.49□□□□□ -1.69
Sh3rf1Q69ZI1 Gm5937-201ENSMUST00000119715 643 ntBASIC4.49□□□□□ -1.69
Sh3rf1Q69ZI1 Gm6574-201ENSMUST00000120037 362 ntBASIC4.49□□□□□ -1.69
Sh3rf1Q69ZI1 AA413626-201ENSMUST00000121125 494 ntBASIC4.49□□□□□ -1.69
Sh3rf1Q69ZI1 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Sh3rf1Q69ZI1 Gm25223-201ENSMUST00000158200 110 ntBASIC4.49□□□□□ -1.69
Sh3rf1Q69ZI1 Gm25834-201ENSMUST00000158916 101 ntBASIC4.49□□□□□ -1.69
Sh3rf1Q69ZI1 Gm23921-201ENSMUST00000175258 107 ntBASIC4.49□□□□□ -1.69
Sh3rf1Q69ZI1 Gm28552-201ENSMUST00000190725 388 ntBASIC4.49□□□□□ -1.69
Sh3rf1Q69ZI1 Gm37636-201ENSMUST00000193583 359 ntBASIC4.49□□□□□ -1.69
Sh3rf1Q69ZI1 Gm37089-201ENSMUST00000195616 129 ntBASIC4.49□□□□□ -1.69
Sh3rf1Q69ZI1 Gm44389-201ENSMUST00000203795 182 ntBASIC4.49□□□□□ -1.69
Sh3rf1Q69ZI1 Gm7726-201ENSMUST00000206241 231 ntBASIC4.49□□□□□ -1.69
Sh3rf1Q69ZI1 Gm45772-201ENSMUST00000212961 240 ntBASIC4.49□□□□□ -1.69
Sh3rf1Q69ZI1 AC145736.2-201ENSMUST00000216305 365 ntBASIC4.49□□□□□ -1.69
Sh3rf1Q69ZI1 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Sh3rf1Q69ZI1 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Sh3rf1Q69ZI1 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Sh3rf1Q69ZI1 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Sh3rf1Q69ZI1 Gm43871-201ENSMUST00000204931 1955 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms