Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 AC169038.1-201ENSMUST00000227378 1352 ntBASIC2.38□□□□□ -2.03
Six4Q61321 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Six4Q61321 Gm24340-201ENSMUST00000104208 97 ntBASIC2.38□□□□□ -2.03
Six4Q61321 Gm22674-201ENSMUST00000104413 131 ntBASIC2.38□□□□□ -2.03
Six4Q61321 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Six4Q61321 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC2.38□□□□□ -2.03
Six4Q61321 Gm23889-201ENSMUST00000122689 104 ntBASIC2.38□□□□□ -2.03
Six4Q61321 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Six4Q61321 Gm17063-201ENSMUST00000168135 456 ntBASIC2.38□□□□□ -2.03
Six4Q61321 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Six4Q61321 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC2.38□□□□□ -2.03
Six4Q61321 Gm27220-201ENSMUST00000183453 262 ntBASIC2.38□□□□□ -2.03
Six4Q61321 Gm19694-201ENSMUST00000192364 505 ntBASIC2.38□□□□□ -2.03
Six4Q61321 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC2.38□□□□□ -2.03
Six4Q61321 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC2.38□□□□□ -2.03
Six4Q61321 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC2.38□□□□□ -2.03
Six4Q61321 Trav12-4-201ENSMUST00000200663 271 ntBASIC2.38□□□□□ -2.03
Six4Q61321 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC2.38□□□□□ -2.03
Six4Q61321 Gm17850-201ENSMUST00000210023 1154 ntBASIC2.38□□□□□ -2.03
Six4Q61321 Gm45288-201ENSMUST00000210236 151 ntBASIC2.38□□□□□ -2.03
Six4Q61321 Gm45551-201ENSMUST00000211459 928 ntBASIC2.38□□□□□ -2.03
Six4Q61321 Gm45530-201ENSMUST00000211658 225 ntBASIC2.38□□□□□ -2.03
Six4Q61321 AC154552.4-201ENSMUST00000222171 151 ntBASIC2.38□□□□□ -2.03
Six4Q61321 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC2.38□□□□□ -2.03
Six4Q61321 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Six4Q61321 Gm22806-201ENSMUST00000082738 136 ntBASIC2.38□□□□□ -2.03
Six4Q61321 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Six4Q61321 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Six4Q61321 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC2.37□□□□□ -2.03
Six4Q61321 Gm14931-201ENSMUST00000111079 253 ntBASIC2.37□□□□□ -2.03
Six4Q61321 Gm11490-201ENSMUST00000118128 272 ntBASIC2.37□□□□□ -2.03
Six4Q61321 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC2.37□□□□□ -2.03
Six4Q61321 Gm23463-201ENSMUST00000122468 99 ntBASIC2.37□□□□□ -2.03
Six4Q61321 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC2.37□□□□□ -2.03
Six4Q61321 Gm14651-201ENSMUST00000147192 442 ntBASIC2.37□□□□□ -2.03
Six4Q61321 Gm22755-201ENSMUST00000157143 100 ntBASIC2.37□□□□□ -2.03
Six4Q61321 Gm23588-201ENSMUST00000157659 99 ntBASIC2.37□□□□□ -2.03
Six4Q61321 Gm8580-201ENSMUST00000160295 464 ntBASIC2.37□□□□□ -2.03
Six4Q61321 Gm17183-201ENSMUST00000171170 493 ntBASIC2.37□□□□□ -2.03
Six4Q61321 Gm27520-201ENSMUST00000184872 81 ntBASIC2.37□□□□□ -2.03
Six4Q61321 Gm27369-201ENSMUST00000185182 71 ntBASIC2.37□□□□□ -2.03
Six4Q61321 Gm38281-201ENSMUST00000192301 315 ntBASIC2.37□□□□□ -2.03
Six4Q61321 Gm37319-201ENSMUST00000193500 636 ntBASIC2.37□□□□□ -2.03
Six4Q61321 Gm37732-201ENSMUST00000194377 316 ntBASIC2.37□□□□□ -2.03
Six4Q61321 Gm43070-201ENSMUST00000196938 415 ntBASIC2.37□□□□□ -2.03
Six4Q61321 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC2.37□□□□□ -2.03
Six4Q61321 Gm44954-201ENSMUST00000208513 227 ntBASIC2.37□□□□□ -2.03
Six4Q61321 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC2.37□□□□□ -2.03
Six4Q61321 Gm7753-201ENSMUST00000221007 867 ntBASIC2.37□□□□□ -2.03
Six4Q61321 AC126673.2-201ENSMUST00000221052 686 ntBASIC2.37□□□□□ -2.03
Six4Q61321 AC121114.1-201ENSMUST00000228522 570 ntBASIC2.37□□□□□ -2.03
Six4Q61321 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Six4Q61321 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC2.37□□□□□ -2.03
Six4Q61321 Gm24254-201ENSMUST00000083702 104 ntBASIC2.37□□□□□ -2.03
Six4Q61321 Gm9496-201ENSMUST00000191295 1601 ntBASIC2.37□□□□□ -2.03
Six4Q61321 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Six4Q61321 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Six4Q61321 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.37□□□□□ -2.03
Six4Q61321 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Six4Q61321 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
Six4Q61321 AC167192.3-201ENSMUST00000224096 1567 ntBASIC2.36□□□□□ -2.03
Six4Q61321 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.36□□□□□ -2.03
Six4Q61321 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC2.36□□□□□ -2.03
Six4Q61321 Gm14913-201ENSMUST00000120011 1093 ntBASIC2.36□□□□□ -2.03
Six4Q61321 Snrpert-201ENSMUST00000121967 279 ntBASIC2.36□□□□□ -2.03
Six4Q61321 Gm24937-201ENSMUST00000122597 134 ntBASIC2.36□□□□□ -2.03
Six4Q61321 Gm22560-201ENSMUST00000157332 120 ntBASIC2.36□□□□□ -2.03
Six4Q61321 Gm23819-201ENSMUST00000158744 109 ntBASIC2.36□□□□□ -2.03
Six4Q61321 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
Six4Q61321 Gm13147-202ENSMUST00000177526 1173 ntBASIC2.36□□□□□ -2.03
Six4Q61321 Gm38149-201ENSMUST00000191943 339 ntBASIC2.36□□□□□ -2.03
Six4Q61321 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.36□□□□□ -2.03
Six4Q61321 Gm35570-201ENSMUST00000198730 681 ntBASIC2.36□□□□□ -2.03
Six4Q61321 Mir497-201ENSMUST00000200557 84 ntBASIC2.36□□□□□ -2.03
Six4Q61321 Gm44058-201ENSMUST00000204335 467 ntBASIC2.36□□□□□ -2.03
Six4Q61321 Gm45614-201ENSMUST00000209994 721 ntBASIC2.36□□□□□ -2.03
Six4Q61321 Gm45696-201ENSMUST00000212088 985 ntBASIC2.36□□□□□ -2.03
Six4Q61321 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Six4Q61321 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC2.36□□□□□ -2.03
Six4Q61321 AC124569.1-201ENSMUST00000225932 101 ntBASIC2.36□□□□□ -2.03
Six4Q61321 Gm14404-201ENSMUST00000119117 1660 ntBASIC2.36□□□□□ -2.03
Six4Q61321 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.36□□□□□ -2.03
Six4Q61321 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC2.36□□□□□ -2.03
Six4Q61321 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
Six4Q61321 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Six4Q61321 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Six4Q61321 Gm14411-201ENSMUST00000121798 914 ntBASIC2.35□□□□□ -2.03
Six4Q61321 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC2.35□□□□□ -2.03
Six4Q61321 Gm14368-201ENSMUST00000145305 415 ntBASIC2.35□□□□□ -2.03
Six4Q61321 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC2.35□□□□□ -2.03
Six4Q61321 Gm25391-201ENSMUST00000157342 134 ntBASIC2.35□□□□□ -2.03
Six4Q61321 Gm23754-201ENSMUST00000157576 63 ntBASIC2.35□□□□□ -2.03
Six4Q61321 Gm25863-201ENSMUST00000158249 329 ntBASIC2.35□□□□□ -2.03
Six4Q61321 Gm17061-201ENSMUST00000163167 499 ntBASIC2.35□□□□□ -2.03
Six4Q61321 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC2.35□□□□□ -2.03
Six4Q61321 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC2.35□□□□□ -2.03
Six4Q61321 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Six4Q61321 Gm28637-201ENSMUST00000179424 345 ntBASIC2.35□□□□□ -2.03
Six4Q61321 Gm8392-201ENSMUST00000185647 835 ntBASIC2.35□□□□□ -2.03
Six4Q61321 Gm28399-201ENSMUST00000186221 318 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms