Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Gm38083-201ENSMUST00000194758 3498 ntBASIC2.54□□□□□ -2
Usf1Q61069 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC2.53□□□□□ -2
Usf1Q61069 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Usf1Q61069 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Usf1Q61069 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Usf1Q61069 Gm15282-201ENSMUST00000117707 300 ntBASIC2.53□□□□□ -2
Usf1Q61069 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC2.53□□□□□ -2
Usf1Q61069 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC2.53□□□□□ -2
Usf1Q61069 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC2.53□□□□□ -2
Usf1Q61069 Gm22794-201ENSMUST00000157228 306 ntBASIC2.53□□□□□ -2
Usf1Q61069 Gm24443-201ENSMUST00000157242 132 ntBASIC2.53□□□□□ -2
Usf1Q61069 Gm22143-201ENSMUST00000157401 203 ntBASIC2.53□□□□□ -2
Usf1Q61069 Gm26177-201ENSMUST00000178683 107 ntBASIC2.53□□□□□ -2
Usf1Q61069 Gm7258-201ENSMUST00000179317 300 ntBASIC2.53□□□□□ -2
Usf1Q61069 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC2.53□□□□□ -2
Usf1Q61069 Gm28956-201ENSMUST00000189047 427 ntBASIC2.53□□□□□ -2
Usf1Q61069 Gm7858-201ENSMUST00000190177 622 ntBASIC2.53□□□□□ -2
Usf1Q61069 Gm37751-201ENSMUST00000192440 1198 ntBASIC2.53□□□□□ -2
Usf1Q61069 Gm37438-201ENSMUST00000192813 393 ntBASIC2.53□□□□□ -2
Usf1Q61069 Gm44520-201ENSMUST00000205447 802 ntBASIC2.53□□□□□ -2
Usf1Q61069 Gm45192-201ENSMUST00000206749 283 ntBASIC2.53□□□□□ -2
Usf1Q61069 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC2.53□□□□□ -2
Usf1Q61069 AC154252.1-201ENSMUST00000226041 473 ntBASIC2.53□□□□□ -2
Usf1Q61069 Mir127-201ENSMUST00000093568 70 ntBASIC2.53□□□□□ -2
Usf1Q61069 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Usf1Q61069 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC2.53□□□□□ -2
Usf1Q61069 AC121598.3-201ENSMUST00000227179 1643 ntBASIC2.53□□□□□ -2
Usf1Q61069 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC2.53□□□□□ -2.01
Usf1Q61069 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2.01
Usf1Q61069 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Usf1Q61069 Gm43663-201ENSMUST00000198643 1505 ntBASIC2.52□□□□□ -2.01
Usf1Q61069 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Usf1Q61069 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Usf1Q61069 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Usf1Q61069 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Usf1Q61069 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Usf1Q61069 Mir499-201ENSMUST00000102357 79 ntBASIC2.52□□□□□ -2.01
Usf1Q61069 Gm14971-201ENSMUST00000117980 663 ntBASIC2.52□□□□□ -2.01
Usf1Q61069 Gm14897-201ENSMUST00000118213 207 ntBASIC2.52□□□□□ -2.01
Usf1Q61069 Gm13541-201ENSMUST00000119519 283 ntBASIC2.52□□□□□ -2.01
Usf1Q61069 Gm14867-201ENSMUST00000120156 866 ntBASIC2.52□□□□□ -2.01
Usf1Q61069 Gm15272-201ENSMUST00000120865 233 ntBASIC2.52□□□□□ -2.01
Usf1Q61069 Gm22755-201ENSMUST00000157143 100 ntBASIC2.52□□□□□ -2.01
Usf1Q61069 Gm25391-201ENSMUST00000157342 134 ntBASIC2.52□□□□□ -2.01
Usf1Q61069 Gm5967-201ENSMUST00000172723 494 ntBASIC2.52□□□□□ -2.01
Usf1Q61069 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC2.52□□□□□ -2.01
Usf1Q61069 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC2.52□□□□□ -2.01
Usf1Q61069 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC2.52□□□□□ -2.01
Usf1Q61069 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC2.52□□□□□ -2.01
Usf1Q61069 Gm44254-201ENSMUST00000204184 322 ntBASIC2.52□□□□□ -2.01
Usf1Q61069 Gm44718-201ENSMUST00000206886 359 ntBASIC2.52□□□□□ -2.01
Usf1Q61069 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Usf1Q61069 AC118639.1-201ENSMUST00000227204 338 ntBASIC2.52□□□□□ -2.01
Usf1Q61069 CT030238.4-201ENSMUST00000228579 801 ntBASIC2.52□□□□□ -2.01
Usf1Q61069 Gm23738-201ENSMUST00000082828 171 ntBASIC2.52□□□□□ -2.01
Usf1Q61069 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Usf1Q61069 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Usf1Q61069 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Usf1Q61069 Gm43379-201ENSMUST00000196253 7726 ntBASIC2.52□□□□□ -2.01
Usf1Q61069 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Usf1Q61069 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Usf1Q61069 Gm15936-201ENSMUST00000118706 460 ntBASIC2.51□□□□□ -2.01
Usf1Q61069 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC2.51□□□□□ -2.01
Usf1Q61069 Gm12617-201ENSMUST00000121268 381 ntBASIC2.51□□□□□ -2.01
Usf1Q61069 Gm14411-201ENSMUST00000121798 914 ntBASIC2.51□□□□□ -2.01
Usf1Q61069 Gm12368-201ENSMUST00000122251 434 ntBASIC2.51□□□□□ -2.01
Usf1Q61069 Gm13424-201ENSMUST00000122301 354 ntBASIC2.51□□□□□ -2.01
Usf1Q61069 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC2.51□□□□□ -2.01
Usf1Q61069 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC2.51□□□□□ -2.01
Usf1Q61069 Gm26101-201ENSMUST00000157246 105 ntBASIC2.51□□□□□ -2.01
Usf1Q61069 Gm25863-201ENSMUST00000158249 329 ntBASIC2.51□□□□□ -2.01
Usf1Q61069 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Usf1Q61069 Gm25476-201ENSMUST00000175125 185 ntBASIC2.51□□□□□ -2.01
Usf1Q61069 Gm27520-201ENSMUST00000184872 81 ntBASIC2.51□□□□□ -2.01
Usf1Q61069 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC2.51□□□□□ -2.01
Usf1Q61069 Igkv11-114-201ENSMUST00000200013 346 ntBASIC2.51□□□□□ -2.01
Usf1Q61069 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC2.51□□□□□ -2.01
Usf1Q61069 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC2.51□□□□□ -2.01
Usf1Q61069 Gm43026-201ENSMUST00000202972 325 ntBASIC2.51□□□□□ -2.01
Usf1Q61069 Gm44157-201ENSMUST00000204720 410 ntBASIC2.51□□□□□ -2.01
Usf1Q61069 Gm44844-201ENSMUST00000207242 336 ntBASIC2.51□□□□□ -2.01
Usf1Q61069 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Usf1Q61069 AC091260.1-201ENSMUST00000216112 229 ntBASIC2.51□□□□□ -2.01
Usf1Q61069 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC2.51□□□□□ -2.01
Usf1Q61069 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.51□□□□□ -2.01
Usf1Q61069 AC160550.3-201ENSMUST00000226818 400 ntBASIC2.51□□□□□ -2.01
Usf1Q61069 Gm9762-201ENSMUST00000036976 444 ntBASIC2.51□□□□□ -2.01
Usf1Q61069 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Usf1Q61069 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Usf1Q61069 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC2.51□□□□□ -2.01
Usf1Q61069 Gm44679-201ENSMUST00000207202 2908 ntBASIC2.51□□□□□ -2.01
Usf1Q61069 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
Usf1Q61069 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Usf1Q61069 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Usf1Q61069 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Usf1Q61069 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
Usf1Q61069 Gm15302-201ENSMUST00000117779 2630 ntBASIC2.5□□□□□ -2.01
Usf1Q61069 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC2.5□□□□□ -2.01
Usf1Q61069 Gm26002-201ENSMUST00000101915 107 ntBASIC2.5□□□□□ -2.01
Usf1Q61069 Gm13880-201ENSMUST00000118421 474 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms