Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC2.03□□□□□ -2.08
Trav3-3Q5R1C3 Gm37751-201ENSMUST00000192440 1198 ntBASIC2.03□□□□□ -2.08
Trav3-3Q5R1C3 Gm36943-201ENSMUST00000194422 282 ntBASIC2.03□□□□□ -2.08
Trav3-3Q5R1C3 Gm43722-201ENSMUST00000196054 124 ntBASIC2.03□□□□□ -2.08
Trav3-3Q5R1C3 Gm44392-201ENSMUST00000196758 115 ntBASIC2.03□□□□□ -2.08
Trav3-3Q5R1C3 Gm43193-201ENSMUST00000197732 441 ntBASIC2.03□□□□□ -2.08
Trav3-3Q5R1C3 Gm44554-201ENSMUST00000208738 147 ntBASIC2.03□□□□□ -2.08
Trav3-3Q5R1C3 Gm45551-201ENSMUST00000211459 928 ntBASIC2.03□□□□□ -2.08
Trav3-3Q5R1C3 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC2.03□□□□□ -2.08
Trav3-3Q5R1C3 Gm9068-201ENSMUST00000217393 455 ntBASIC2.03□□□□□ -2.08
Trav3-3Q5R1C3 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC2.03□□□□□ -2.08
Trav3-3Q5R1C3 Gm2544-201ENSMUST00000222702 756 ntBASIC2.03□□□□□ -2.08
Trav3-3Q5R1C3 AC167977.2-201ENSMUST00000225676 682 ntBASIC2.03□□□□□ -2.08
Trav3-3Q5R1C3 AC117588.2-201ENSMUST00000228340 311 ntBASIC2.03□□□□□ -2.08
Trav3-3Q5R1C3 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Trav3-3Q5R1C3 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
Trav3-3Q5R1C3 Gm23925-201ENSMUST00000082471 132 ntBASIC2.03□□□□□ -2.08
Trav3-3Q5R1C3 Gm24147-201ENSMUST00000082763 144 ntBASIC2.03□□□□□ -2.08
Trav3-3Q5R1C3 Gm22265-201ENSMUST00000082947 116 ntBASIC2.03□□□□□ -2.08
Trav3-3Q5R1C3 Mir27a-201ENSMUST00000083510 87 ntBASIC2.03□□□□□ -2.08
Trav3-3Q5R1C3 Gm25411-201ENSMUST00000083760 151 ntBASIC2.03□□□□□ -2.08
Trav3-3Q5R1C3 Gm16261-201ENSMUST00000096813 205 ntBASIC2.03□□□□□ -2.08
Trav3-3Q5R1C3 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
Trav3-3Q5R1C3 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
Trav3-3Q5R1C3 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
Trav3-3Q5R1C3 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Trav3-3Q5R1C3 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC2.02□□□□□ -2.09
Trav3-3Q5R1C3 Gm12386-201ENSMUST00000117380 688 ntBASIC2.02□□□□□ -2.09
Trav3-3Q5R1C3 Gm14359-201ENSMUST00000118883 424 ntBASIC2.02□□□□□ -2.09
Trav3-3Q5R1C3 Gm14360-201ENSMUST00000120670 393 ntBASIC2.02□□□□□ -2.09
Trav3-3Q5R1C3 Gm24836-201ENSMUST00000122609 108 ntBASIC2.02□□□□□ -2.09
Trav3-3Q5R1C3 Gm9498-201ENSMUST00000140849 291 ntBASIC2.02□□□□□ -2.09
Trav3-3Q5R1C3 Gm8289-201ENSMUST00000144814 1182 ntBASIC2.02□□□□□ -2.09
Trav3-3Q5R1C3 Gm14368-201ENSMUST00000145305 415 ntBASIC2.02□□□□□ -2.09
Trav3-3Q5R1C3 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Trav3-3Q5R1C3 Gm22765-201ENSMUST00000158371 128 ntBASIC2.02□□□□□ -2.09
Trav3-3Q5R1C3 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC2.02□□□□□ -2.09
Trav3-3Q5R1C3 Gm9071-201ENSMUST00000165915 474 ntBASIC2.02□□□□□ -2.09
Trav3-3Q5R1C3 Gm4540-201ENSMUST00000170669 429 ntBASIC2.02□□□□□ -2.09
Trav3-3Q5R1C3 Gm20651-201ENSMUST00000177219 329 ntBASIC2.02□□□□□ -2.09
Trav3-3Q5R1C3 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC2.02□□□□□ -2.09
Trav3-3Q5R1C3 Gm25874-201ENSMUST00000178030 79 ntBASIC2.02□□□□□ -2.09
Trav3-3Q5R1C3 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
Trav3-3Q5R1C3 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
Trav3-3Q5R1C3 Gm38213-201ENSMUST00000193203 173 ntBASIC2.02□□□□□ -2.09
Trav3-3Q5R1C3 Gm8041-201ENSMUST00000199755 616 ntBASIC2.02□□□□□ -2.09
Trav3-3Q5R1C3 Gm43026-201ENSMUST00000202972 325 ntBASIC2.02□□□□□ -2.09
Trav3-3Q5R1C3 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC2.02□□□□□ -2.09
Trav3-3Q5R1C3 Gm17911-201ENSMUST00000210806 877 ntBASIC2.02□□□□□ -2.09
Trav3-3Q5R1C3 Gm18488-201ENSMUST00000215082 364 ntBASIC2.02□□□□□ -2.09
Trav3-3Q5R1C3 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.02□□□□□ -2.09
Trav3-3Q5R1C3 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Trav3-3Q5R1C3 CT572985.2-201ENSMUST00000220496 211 ntBASIC2.02□□□□□ -2.09
Trav3-3Q5R1C3 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC2.02□□□□□ -2.09
Trav3-3Q5R1C3 AC132881.2-201ENSMUST00000225474 709 ntBASIC2.02□□□□□ -2.09
Trav3-3Q5R1C3 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Trav3-3Q5R1C3 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC2.02□□□□□ -2.09
Trav3-3Q5R1C3 Gm23247-201ENSMUST00000083373 107 ntBASIC2.02□□□□□ -2.09
Trav3-3Q5R1C3 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC2.02□□□□□ -2.09
Trav3-3Q5R1C3 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Trav3-3Q5R1C3 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Trav3-3Q5R1C3 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.02□□□□□ -2.09
Trav3-3Q5R1C3 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC2.02□□□□□ -2.09
Trav3-3Q5R1C3 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.01□□□□□ -2.09
Trav3-3Q5R1C3 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Trav3-3Q5R1C3 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Trav3-3Q5R1C3 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC2.01□□□□□ -2.09
Trav3-3Q5R1C3 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
Trav3-3Q5R1C3 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Trav3-3Q5R1C3 Gm14073-201ENSMUST00000117344 381 ntBASIC2.01□□□□□ -2.09
Trav3-3Q5R1C3 Gm11576-201ENSMUST00000117433 417 ntBASIC2.01□□□□□ -2.09
Trav3-3Q5R1C3 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC2.01□□□□□ -2.09
Trav3-3Q5R1C3 Gm15112-201ENSMUST00000120152 860 ntBASIC2.01□□□□□ -2.09
Trav3-3Q5R1C3 Gm5646-201ENSMUST00000120568 714 ntBASIC2.01□□□□□ -2.09
Trav3-3Q5R1C3 Gm8880-201ENSMUST00000121800 454 ntBASIC2.01□□□□□ -2.09
Trav3-3Q5R1C3 Gm26020-201ENSMUST00000122729 183 ntBASIC2.01□□□□□ -2.09
Trav3-3Q5R1C3 Gm22452-201ENSMUST00000122804 104 ntBASIC2.01□□□□□ -2.09
Trav3-3Q5R1C3 Gm26186-201ENSMUST00000157689 125 ntBASIC2.01□□□□□ -2.09
Trav3-3Q5R1C3 Gm23034-201ENSMUST00000158001 147 ntBASIC2.01□□□□□ -2.09
Trav3-3Q5R1C3 Gm3102-201ENSMUST00000164236 489 ntBASIC2.01□□□□□ -2.09
Trav3-3Q5R1C3 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC2.01□□□□□ -2.09
Trav3-3Q5R1C3 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC2.01□□□□□ -2.09
Trav3-3Q5R1C3 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC2.01□□□□□ -2.09
Trav3-3Q5R1C3 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
Trav3-3Q5R1C3 Gm7871-201ENSMUST00000195346 618 ntBASIC2.01□□□□□ -2.09
Trav3-3Q5R1C3 AC154296.1-201ENSMUST00000198150 67 ntBASIC2.01□□□□□ -2.09
Trav3-3Q5R1C3 Mir3069-201ENSMUST00000198802 65 ntBASIC2.01□□□□□ -2.09
Trav3-3Q5R1C3 Gm25203-202ENSMUST00000200458 216 ntBASIC2.01□□□□□ -2.09
Trav3-3Q5R1C3 Igkv1-136-201ENSMUST00000200635 297 ntBASIC2.01□□□□□ -2.09
Trav3-3Q5R1C3 Gm44919-201ENSMUST00000208587 1073 ntBASIC2.01□□□□□ -2.09
Trav3-3Q5R1C3 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC2.01□□□□□ -2.09
Trav3-3Q5R1C3 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC2.01□□□□□ -2.09
Trav3-3Q5R1C3 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Trav3-3Q5R1C3 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Trav3-3Q5R1C3 Gm26129-201ENSMUST00000082719 107 ntBASIC2.01□□□□□ -2.09
Trav3-3Q5R1C3 Gm25203-201ENSMUST00000082842 215 ntBASIC2.01□□□□□ -2.09
Trav3-3Q5R1C3 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.01□□□□□ -2.09
Trav3-3Q5R1C3 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
Trav3-3Q5R1C3 Mir499-201ENSMUST00000102357 79 ntBASIC2□□□□□ -2.09
Trav3-3Q5R1C3 Gm22590-201ENSMUST00000104247 128 ntBASIC2□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms