Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim41Q5NCC3 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim41Q5NCC3 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim41Q5NCC3 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Trim41Q5NCC3 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim41Q5NCC3 Gm37226-201ENSMUST00000191644 3255 ntBASIC8.07□□□□□ -1.12
Trim41Q5NCC3 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim41Q5NCC3 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC8.07□□□□□ -1.12
Trim41Q5NCC3 Gm25727-201ENSMUST00000104522 131 ntBASIC8.07□□□□□ -1.12
Trim41Q5NCC3 Gm14748-201ENSMUST00000119819 411 ntBASIC8.07□□□□□ -1.12
Trim41Q5NCC3 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC8.07□□□□□ -1.12
Trim41Q5NCC3 Gm22243-201ENSMUST00000178754 120 ntBASIC8.07□□□□□ -1.12
Trim41Q5NCC3 Gm18011-201ENSMUST00000203717 565 ntBASIC8.07□□□□□ -1.12
Trim41Q5NCC3 Snora7a-201ENSMUST00000082629 140 ntBASIC8.07□□□□□ -1.12
Trim41Q5NCC3 Gm26055-201ENSMUST00000083038 107 ntBASIC8.07□□□□□ -1.12
Trim41Q5NCC3 Gm22868-201ENSMUST00000083955 164 ntBASIC8.07□□□□□ -1.12
Trim41Q5NCC3 Gm18189-201ENSMUST00000218153 1951 ntBASIC8.07□□□□□ -1.12
Trim41Q5NCC3 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Trim41Q5NCC3 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim41Q5NCC3 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim41Q5NCC3 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
Trim41Q5NCC3 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC8.06□□□□□ -1.12
Trim41Q5NCC3 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim41Q5NCC3 Gm23584-201ENSMUST00000157655 129 ntBASIC8.06□□□□□ -1.12
Trim41Q5NCC3 Gm22315-201ENSMUST00000158010 143 ntBASIC8.06□□□□□ -1.12
Trim41Q5NCC3 Gm23312-201ENSMUST00000158774 102 ntBASIC8.06□□□□□ -1.12
Trim41Q5NCC3 Gm28344-201ENSMUST00000185704 279 ntBASIC8.06□□□□□ -1.12
Trim41Q5NCC3 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Trim41Q5NCC3 Ighv1-46-201ENSMUST00000193988 351 ntBASIC8.06□□□□□ -1.12
Trim41Q5NCC3 Gm42830-201ENSMUST00000196642 313 ntBASIC8.06□□□□□ -1.12
Trim41Q5NCC3 Gm43193-201ENSMUST00000197732 441 ntBASIC8.06□□□□□ -1.12
Trim41Q5NCC3 AC122320.1-201ENSMUST00000227233 105 ntBASIC8.06□□□□□ -1.12
Trim41Q5NCC3 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim41Q5NCC3 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim41Q5NCC3 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Trim41Q5NCC3 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim41Q5NCC3 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim41Q5NCC3 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Trim41Q5NCC3 Gm35629-201ENSMUST00000209684 2241 ntBASIC8.06□□□□□ -1.12
Trim41Q5NCC3 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC8.06□□□□□ -1.12
Trim41Q5NCC3 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC8.06□□□□□ -1.12
Trim41Q5NCC3 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC8.06□□□□□ -1.12
Trim41Q5NCC3 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC8.05□□□□□ -1.12
Trim41Q5NCC3 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC8.05□□□□□ -1.12
Trim41Q5NCC3 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Trim41Q5NCC3 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim41Q5NCC3 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC8.05□□□□□ -1.12
Trim41Q5NCC3 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC8.05□□□□□ -1.12
Trim41Q5NCC3 Gm12062-201ENSMUST00000117533 259 ntBASIC8.05□□□□□ -1.12
Trim41Q5NCC3 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC8.05□□□□□ -1.12
Trim41Q5NCC3 Gm14694-201ENSMUST00000121856 282 ntBASIC8.05□□□□□ -1.12
Trim41Q5NCC3 Gm37693-201ENSMUST00000194562 234 ntBASIC8.05□□□□□ -1.12
Trim41Q5NCC3 Gm2522-201ENSMUST00000204280 322 ntBASIC8.05□□□□□ -1.12
Trim41Q5NCC3 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC8.05□□□□□ -1.12
Trim41Q5NCC3 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Trim41Q5NCC3 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim41Q5NCC3 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim41Q5NCC3 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim41Q5NCC3 Gm8744-201ENSMUST00000204475 3581 ntBASIC8.05□□□□□ -1.12
Trim41Q5NCC3 AC116797.2-201ENSMUST00000224763 4221 ntBASIC8.05□□□□□ -1.12
Trim41Q5NCC3 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim41Q5NCC3 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC8.04□□□□□ -1.12
Trim41Q5NCC3 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Trim41Q5NCC3 Gm25197-201ENSMUST00000175516 126 ntBASIC8.04□□□□□ -1.12
Trim41Q5NCC3 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC8.04□□□□□ -1.12
Trim41Q5NCC3 Gm37966-201ENSMUST00000193122 326 ntBASIC8.04□□□□□ -1.12
Trim41Q5NCC3 Igkv2-113-201ENSMUST00000196138 362 ntBASIC8.04□□□□□ -1.12
Trim41Q5NCC3 Gm26379-202ENSMUST00000200225 132 ntBASIC8.04□□□□□ -1.12
Trim41Q5NCC3 AC155715.1-201ENSMUST00000213575 463 ntBASIC8.04□□□□□ -1.12
Trim41Q5NCC3 AC130536.1-201ENSMUST00000224425 271 ntBASIC8.04□□□□□ -1.12
Trim41Q5NCC3 AC166830.2-201ENSMUST00000225821 196 ntBASIC8.04□□□□□ -1.12
Trim41Q5NCC3 AC115291.2-201ENSMUST00000228335 437 ntBASIC8.04□□□□□ -1.12
Trim41Q5NCC3 Gm10916-201ENSMUST00000080330 483 ntBASIC8.04□□□□□ -1.12
Trim41Q5NCC3 Gm22061-201ENSMUST00000082557 107 ntBASIC8.04□□□□□ -1.12
Trim41Q5NCC3 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim41Q5NCC3 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Trim41Q5NCC3 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Trim41Q5NCC3 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim41Q5NCC3 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Trim41Q5NCC3 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Trim41Q5NCC3 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Trim41Q5NCC3 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
Trim41Q5NCC3 Gm44321-201ENSMUST00000204262 2855 ntBASIC8.03□□□□□ -1.12
Trim41Q5NCC3 Gm22321-201ENSMUST00000157152 104 ntBASIC8.03□□□□□ -1.12
Trim41Q5NCC3 Gm23959-201ENSMUST00000157208 324 ntBASIC8.03□□□□□ -1.12
Trim41Q5NCC3 Gm23554-201ENSMUST00000157818 110 ntBASIC8.03□□□□□ -1.12
Trim41Q5NCC3 Gm23640-201ENSMUST00000157860 104 ntBASIC8.03□□□□□ -1.12
Trim41Q5NCC3 Gm3851-201ENSMUST00000168653 318 ntBASIC8.03□□□□□ -1.12
Trim41Q5NCC3 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC8.03□□□□□ -1.12
Trim41Q5NCC3 Gm28552-201ENSMUST00000190725 388 ntBASIC8.03□□□□□ -1.12
Trim41Q5NCC3 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Trim41Q5NCC3 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Trim41Q5NCC3 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Trim41Q5NCC3 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim41Q5NCC3 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Trim41Q5NCC3 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Trim41Q5NCC3 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Trim41Q5NCC3 Mir465b-1-201ENSMUST00000103940 79 ntBASIC8.02□□□□□ -1.13
Trim41Q5NCC3 Mir465b-2-201ENSMUST00000104662 79 ntBASIC8.02□□□□□ -1.13
Trim41Q5NCC3 Gm23755-201ENSMUST00000157578 343 ntBASIC8.02□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms