Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Snord116l2-201ENSMUST00000178675 94 ntBASIC2.46□□□□□ -2.02
Upf3bQ3ULL6 Gm26270-201ENSMUST00000178690 94 ntBASIC2.46□□□□□ -2.02
Upf3bQ3ULL6 Snord116l16-201ENSMUST00000178777 94 ntBASIC2.46□□□□□ -2.02
Upf3bQ3ULL6 Gm23313-201ENSMUST00000178931 94 ntBASIC2.46□□□□□ -2.02
Upf3bQ3ULL6 Snord116l17-201ENSMUST00000178936 94 ntBASIC2.46□□□□□ -2.02
Upf3bQ3ULL6 Gm23089-201ENSMUST00000178947 94 ntBASIC2.46□□□□□ -2.02
Upf3bQ3ULL6 Snord116l10-201ENSMUST00000179053 94 ntBASIC2.46□□□□□ -2.02
Upf3bQ3ULL6 Gm24153-201ENSMUST00000179280 94 ntBASIC2.46□□□□□ -2.02
Upf3bQ3ULL6 Gm25597-201ENSMUST00000179388 94 ntBASIC2.46□□□□□ -2.02
Upf3bQ3ULL6 Gm23287-201ENSMUST00000179427 116 ntBASIC2.46□□□□□ -2.02
Upf3bQ3ULL6 Snord116l1-201ENSMUST00000179518 94 ntBASIC2.46□□□□□ -2.02
Upf3bQ3ULL6 Gm25816-201ENSMUST00000179764 94 ntBASIC2.46□□□□□ -2.02
Upf3bQ3ULL6 Snord116l8-201ENSMUST00000179889 94 ntBASIC2.46□□□□□ -2.02
Upf3bQ3ULL6 Snord116l7-201ENSMUST00000179895 94 ntBASIC2.46□□□□□ -2.02
Upf3bQ3ULL6 Snord116l5-201ENSMUST00000179927 94 ntBASIC2.46□□□□□ -2.02
Upf3bQ3ULL6 Snord116l6-201ENSMUST00000179955 94 ntBASIC2.46□□□□□ -2.02
Upf3bQ3ULL6 Gm26188-201ENSMUST00000179963 94 ntBASIC2.46□□□□□ -2.02
Upf3bQ3ULL6 Gm23143-201ENSMUST00000180137 116 ntBASIC2.46□□□□□ -2.02
Upf3bQ3ULL6 Gm26433-201ENSMUST00000180227 94 ntBASIC2.46□□□□□ -2.02
Upf3bQ3ULL6 Snord116l11-201ENSMUST00000180312 94 ntBASIC2.46□□□□□ -2.02
Upf3bQ3ULL6 Gm22128-201ENSMUST00000180346 94 ntBASIC2.46□□□□□ -2.02
Upf3bQ3ULL6 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC2.46□□□□□ -2.02
Upf3bQ3ULL6 Gm28399-201ENSMUST00000186221 318 ntBASIC2.46□□□□□ -2.02
Upf3bQ3ULL6 Gm28572-201ENSMUST00000187444 318 ntBASIC2.46□□□□□ -2.02
Upf3bQ3ULL6 Gm19224-201ENSMUST00000190477 793 ntBASIC2.46□□□□□ -2.02
Upf3bQ3ULL6 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC2.46□□□□□ -2.02
Upf3bQ3ULL6 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC2.46□□□□□ -2.02
Upf3bQ3ULL6 Gm37732-201ENSMUST00000194377 316 ntBASIC2.46□□□□□ -2.02
Upf3bQ3ULL6 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Upf3bQ3ULL6 Gm18414-201ENSMUST00000210858 694 ntBASIC2.46□□□□□ -2.02
Upf3bQ3ULL6 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
Upf3bQ3ULL6 AC167202.1-201ENSMUST00000219027 331 ntBASIC2.46□□□□□ -2.02
Upf3bQ3ULL6 AC154552.4-201ENSMUST00000222171 151 ntBASIC2.46□□□□□ -2.02
Upf3bQ3ULL6 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC2.46□□□□□ -2.02
Upf3bQ3ULL6 AC150560.3-201ENSMUST00000227442 455 ntBASIC2.46□□□□□ -2.02
Upf3bQ3ULL6 Gm9174-201ENSMUST00000078149 255 ntBASIC2.46□□□□□ -2.02
Upf3bQ3ULL6 Gm24871-201ENSMUST00000083099 116 ntBASIC2.46□□□□□ -2.02
Upf3bQ3ULL6 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
Upf3bQ3ULL6 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC2.46□□□□□ -2.02
Upf3bQ3ULL6 Rnu5g-201ENSMUST00000093721 116 ntBASIC2.46□□□□□ -2.02
Upf3bQ3ULL6 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Upf3bQ3ULL6 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
Upf3bQ3ULL6 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC2.46□□□□□ -2.02
Upf3bQ3ULL6 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Upf3bQ3ULL6 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Upf3bQ3ULL6 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
Upf3bQ3ULL6 Gm8569-201ENSMUST00000117630 647 ntBASIC2.45□□□□□ -2.02
Upf3bQ3ULL6 Gm12697-201ENSMUST00000118008 667 ntBASIC2.45□□□□□ -2.02
Upf3bQ3ULL6 Gm14652-201ENSMUST00000118479 235 ntBASIC2.45□□□□□ -2.02
Upf3bQ3ULL6 Gm14669-201ENSMUST00000118841 250 ntBASIC2.45□□□□□ -2.02
Upf3bQ3ULL6 Gm24937-201ENSMUST00000122597 134 ntBASIC2.45□□□□□ -2.02
Upf3bQ3ULL6 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC2.45□□□□□ -2.02
Upf3bQ3ULL6 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Upf3bQ3ULL6 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Upf3bQ3ULL6 Gm37708-201ENSMUST00000192337 895 ntBASIC2.45□□□□□ -2.02
Upf3bQ3ULL6 Mir6925-201ENSMUST00000197857 70 ntBASIC2.45□□□□□ -2.02
Upf3bQ3ULL6 Mir3069-201ENSMUST00000198802 65 ntBASIC2.45□□□□□ -2.02
Upf3bQ3ULL6 Gm19147-201ENSMUST00000199622 652 ntBASIC2.45□□□□□ -2.02
Upf3bQ3ULL6 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.45□□□□□ -2.02
Upf3bQ3ULL6 Gm44966-201ENSMUST00000208096 157 ntBASIC2.45□□□□□ -2.02
Upf3bQ3ULL6 Gm45288-201ENSMUST00000210236 151 ntBASIC2.45□□□□□ -2.02
Upf3bQ3ULL6 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC2.45□□□□□ -2.02
Upf3bQ3ULL6 Gm21089-201ENSMUST00000215843 325 ntBASIC2.45□□□□□ -2.02
Upf3bQ3ULL6 AC157017.2-201ENSMUST00000218354 777 ntBASIC2.45□□□□□ -2.02
Upf3bQ3ULL6 Gm23104-201ENSMUST00000083722 104 ntBASIC2.45□□□□□ -2.02
Upf3bQ3ULL6 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.45□□□□□ -2.02
Upf3bQ3ULL6 Gm42659-201ENSMUST00000196955 1754 ntBASIC2.44□□□□□ -2.02
Upf3bQ3ULL6 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Upf3bQ3ULL6 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Upf3bQ3ULL6 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Upf3bQ3ULL6 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Upf3bQ3ULL6 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC2.44□□□□□ -2.02
Upf3bQ3ULL6 Gm13913-201ENSMUST00000121126 260 ntBASIC2.44□□□□□ -2.02
Upf3bQ3ULL6 Gm14979-201ENSMUST00000121561 1035 ntBASIC2.44□□□□□ -2.02
Upf3bQ3ULL6 Gm23867-201ENSMUST00000122649 274 ntBASIC2.44□□□□□ -2.02
Upf3bQ3ULL6 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC2.44□□□□□ -2.02
Upf3bQ3ULL6 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC2.44□□□□□ -2.02
Upf3bQ3ULL6 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC2.44□□□□□ -2.02
Upf3bQ3ULL6 Gm23642-201ENSMUST00000157858 258 ntBASIC2.44□□□□□ -2.02
Upf3bQ3ULL6 Gm24960-201ENSMUST00000157923 90 ntBASIC2.44□□□□□ -2.02
Upf3bQ3ULL6 Gm22947-201ENSMUST00000158559 91 ntBASIC2.44□□□□□ -2.02
Upf3bQ3ULL6 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Upf3bQ3ULL6 Gm15900-201ENSMUST00000161584 342 ntBASIC2.44□□□□□ -2.02
Upf3bQ3ULL6 Gm17183-201ENSMUST00000171170 493 ntBASIC2.44□□□□□ -2.02
Upf3bQ3ULL6 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC2.44□□□□□ -2.02
Upf3bQ3ULL6 Mir6411-201ENSMUST00000183556 108 ntBASIC2.44□□□□□ -2.02
Upf3bQ3ULL6 AC158622.1-201ENSMUST00000217107 230 ntBASIC2.44□□□□□ -2.02
Upf3bQ3ULL6 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC2.44□□□□□ -2.02
Upf3bQ3ULL6 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC2.44□□□□□ -2.02
Upf3bQ3ULL6 AC117656.3-204ENSMUST00000225656 859 ntBASIC2.44□□□□□ -2.02
Upf3bQ3ULL6 AC161758.2-201ENSMUST00000228513 218 ntBASIC2.44□□□□□ -2.02
Upf3bQ3ULL6 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Upf3bQ3ULL6 Gm22806-201ENSMUST00000082738 136 ntBASIC2.44□□□□□ -2.02
Upf3bQ3ULL6 Gm23723-201ENSMUST00000082996 132 ntBASIC2.44□□□□□ -2.02
Upf3bQ3ULL6 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Upf3bQ3ULL6 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Upf3bQ3ULL6 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
Upf3bQ3ULL6 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.43□□□□□ -2.02
Upf3bQ3ULL6 Gm23472-201ENSMUST00000101806 191 ntBASIC2.43□□□□□ -2.02
Upf3bQ3ULL6 Gm24280-201ENSMUST00000104237 134 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 100.3 ms