Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm23975-201ENSMUST00000082685 106 ntBASIC5.23□□□□□ -1.57
Col17a1Q07563 Gm22997-201ENSMUST00000082845 107 ntBASIC5.23□□□□□ -1.57
Col17a1Q07563 Gm26056-201ENSMUST00000083043 104 ntBASIC5.23□□□□□ -1.57
Col17a1Q07563 Gm21286-201ENSMUST00000098035 545 ntBASIC5.23□□□□□ -1.57
Col17a1Q07563 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col17a1Q07563 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col17a1Q07563 Gm37625-201ENSMUST00000194969 4872 ntBASIC5.23□□□□□ -1.57
Col17a1Q07563 Gm42483-201ENSMUST00000197556 1742 ntBASIC5.23□□□□□ -1.57
Col17a1Q07563 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Col17a1Q07563 Gm37747-201ENSMUST00000193717 4003 ntBASIC5.22□□□□□ -1.57
Col17a1Q07563 Gm42547-201ENSMUST00000201159 3798 ntBASIC5.22□□□□□ -1.57
Col17a1Q07563 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Col17a1Q07563 Gm26297-201ENSMUST00000179464 132 ntBASIC5.22□□□□□ -1.57
Col17a1Q07563 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC5.22□□□□□ -1.57
Col17a1Q07563 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
Col17a1Q07563 Gm44371-201ENSMUST00000204148 467 ntBASIC5.22□□□□□ -1.57
Col17a1Q07563 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC5.22□□□□□ -1.57
Col17a1Q07563 AC153141.1-201ENSMUST00000218636 501 ntBASIC5.22□□□□□ -1.57
Col17a1Q07563 AC138667.2-201ENSMUST00000224880 598 ntBASIC5.22□□□□□ -1.57
Col17a1Q07563 AC168062.3-201ENSMUST00000227025 165 ntBASIC5.22□□□□□ -1.57
Col17a1Q07563 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Col17a1Q07563 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Col17a1Q07563 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Col17a1Q07563 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Col17a1Q07563 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
Col17a1Q07563 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col17a1Q07563 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Col17a1Q07563 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC5.21□□□□□ -1.57
Col17a1Q07563 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC5.21□□□□□ -1.57
Col17a1Q07563 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Col17a1Q07563 Gm44164-201ENSMUST00000203605 2561 ntBASIC5.21□□□□□ -1.57
Col17a1Q07563 Gm7485-201ENSMUST00000119502 1109 ntBASIC5.21□□□□□ -1.58
Col17a1Q07563 Gm14876-201ENSMUST00000120795 327 ntBASIC5.21□□□□□ -1.58
Col17a1Q07563 Gm11965-201ENSMUST00000122017 277 ntBASIC5.21□□□□□ -1.58
Col17a1Q07563 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC5.21□□□□□ -1.58
Col17a1Q07563 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC5.21□□□□□ -1.58
Col17a1Q07563 Gm18604-201ENSMUST00000172535 558 ntBASIC5.21□□□□□ -1.58
Col17a1Q07563 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Col17a1Q07563 Gm28995-201ENSMUST00000186625 261 ntBASIC5.21□□□□□ -1.58
Col17a1Q07563 Gm44857-201ENSMUST00000208331 196 ntBASIC5.21□□□□□ -1.58
Col17a1Q07563 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Col17a1Q07563 Mir28a-201ENSMUST00000083560 86 ntBASIC5.21□□□□□ -1.58
Col17a1Q07563 Gm8074-201ENSMUST00000095071 252 ntBASIC5.21□□□□□ -1.58
Col17a1Q07563 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Col17a1Q07563 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Col17a1Q07563 Gm44288-201ENSMUST00000205061 2795 ntBASIC5.21□□□□□ -1.58
Col17a1Q07563 Gm7709-201ENSMUST00000199391 1858 ntBASIC5.21□□□□□ -1.58
Col17a1Q07563 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Col17a1Q07563 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
Col17a1Q07563 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Col17a1Q07563 CT009504.1-201ENSMUST00000218252 3330 ntBASIC5.2□□□□□ -1.58
Col17a1Q07563 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Col17a1Q07563 Gm13331-201ENSMUST00000117500 448 ntBASIC5.2□□□□□ -1.58
Col17a1Q07563 Gm13603-201ENSMUST00000119404 83 ntBASIC5.2□□□□□ -1.58
Col17a1Q07563 Gm15106-201ENSMUST00000119691 821 ntBASIC5.2□□□□□ -1.58
Col17a1Q07563 Gm14761-201ENSMUST00000121363 262 ntBASIC5.2□□□□□ -1.58
Col17a1Q07563 Gm25669-201ENSMUST00000157699 112 ntBASIC5.2□□□□□ -1.58
Col17a1Q07563 Gm24922-201ENSMUST00000158511 102 ntBASIC5.2□□□□□ -1.58
Col17a1Q07563 Gm9071-201ENSMUST00000165915 474 ntBASIC5.2□□□□□ -1.58
Col17a1Q07563 Gm17159-201ENSMUST00000169043 482 ntBASIC5.2□□□□□ -1.58
Col17a1Q07563 Gm27161-201ENSMUST00000183960 562 ntBASIC5.2□□□□□ -1.58
Col17a1Q07563 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC5.2□□□□□ -1.58
Col17a1Q07563 AC164161.1-201ENSMUST00000214076 639 ntBASIC5.2□□□□□ -1.58
Col17a1Q07563 Gm2628-201ENSMUST00000218019 426 ntBASIC5.2□□□□□ -1.58
Col17a1Q07563 AC154257.2-201ENSMUST00000224166 340 ntBASIC5.2□□□□□ -1.58
Col17a1Q07563 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC5.2□□□□□ -1.58
Col17a1Q07563 AC161572.1-201ENSMUST00000227486 640 ntBASIC5.2□□□□□ -1.58
Col17a1Q07563 Gm7204-201ENSMUST00000062591 600 ntBASIC5.2□□□□□ -1.58
Col17a1Q07563 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col17a1Q07563 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Col17a1Q07563 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Col17a1Q07563 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
Col17a1Q07563 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Col17a1Q07563 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Col17a1Q07563 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
Col17a1Q07563 Gm24586-201ENSMUST00000116695 89 ntBASIC5.2□□□□□ -1.58
Col17a1Q07563 Gm14517-201ENSMUST00000119040 337 ntBASIC5.2□□□□□ -1.58
Col17a1Q07563 Gm11352-201ENSMUST00000119264 517 ntBASIC5.2□□□□□ -1.58
Col17a1Q07563 Gm9225-201ENSMUST00000121921 836 ntBASIC5.2□□□□□ -1.58
Col17a1Q07563 Gm25325-201ENSMUST00000122559 86 ntBASIC5.2□□□□□ -1.58
Col17a1Q07563 Gm22236-201ENSMUST00000157093 106 ntBASIC5.2□□□□□ -1.58
Col17a1Q07563 Gm25454-201ENSMUST00000157947 315 ntBASIC5.2□□□□□ -1.58
Col17a1Q07563 Gm25456-201ENSMUST00000157952 109 ntBASIC5.2□□□□□ -1.58
Col17a1Q07563 Gm8207-201ENSMUST00000171204 502 ntBASIC5.2□□□□□ -1.58
Col17a1Q07563 Gm20698-201ENSMUST00000175657 233 ntBASIC5.2□□□□□ -1.58
Col17a1Q07563 Gm22851-201ENSMUST00000178741 94 ntBASIC5.2□□□□□ -1.58
Col17a1Q07563 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col17a1Q07563 Gm25939-201ENSMUST00000179876 191 ntBASIC5.2□□□□□ -1.58
Col17a1Q07563 Mir6541-201ENSMUST00000183649 110 ntBASIC5.2□□□□□ -1.58
Col17a1Q07563 AC101677.1-201ENSMUST00000218590 158 ntBASIC5.2□□□□□ -1.58
Col17a1Q07563 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC5.2□□□□□ -1.58
Col17a1Q07563 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC5.19□□□□□ -1.58
Col17a1Q07563 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Col17a1Q07563 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC5.19□□□□□ -1.58
Col17a1Q07563 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Col17a1Q07563 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col17a1Q07563 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col17a1Q07563 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Col17a1Q07563 AC121598.3-201ENSMUST00000227179 1643 ntBASIC5.19□□□□□ -1.58
Col17a1Q07563 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 96.9 ms